Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G8150 Aethionema arabicum HOM05D008835 ORTHO05D011094 8.6e-121 438.3 558 100.0
AT2G01740 Arabidopsis thaliana HOM05D008835 ORTHO05D011094 1.7e-81 307.8 439 88.4
AL5G10840 Arabidopsis lyrata HOM05D008835 ORTHO05D011094 6.9e-78 295.8 194 80.4
CARHR144310 Cardamine hirsuta HOM05D008835 ORTHO05D011094 9.0e-78 295.4 441 69.4
Sp2g13190 Schrenkiella parvula HOM05D008835 ORTHO05D011094 2.0e-77 294.3 439 85.9
Thhalv10003932m.g Eutrema salsugineum HOM05D008835 ORTHO05D011094 2.9e-76 290.4 194 78.4
C09p30430 Brassica napus HOM05D008835 ORTHO05D011094 5.9e-61 239.6 196 68.4
BolC9t55906H Brassica oleracea HOM05D008835 ORTHO05D011094 1.0e-60 238.8 196 68.4
BcaC04g21553 Brassica carinata HOM05D008835 ORTHO05D011094 1.1e-59 235.3 196 67.3
A09p23600 Brassica napus HOM05D008835 ORTHO05D011094 1.3e-55 221.9 196 64.8
BraA09t37964Z Brassica rapa HOM05D008835 ORTHO05D011094 1.4e-54 218.4 196 62.8
Cpa.g.sc2.190 Carica papaya HOM05D008835 ORTHO05D011094 4.1e-54 216.9 194 58.2
Carub.0005s0069 Capsella rubella HOM05D008835 ORTHO05D011094 1.8e-49 201.4 124 72.6
CANSAT01G3131 Cannabis sativa HOM05D008835 ORTHO05D011094 4.3e-48 196.8 189 48.7
Sc15g0000240 Simmondsia chinensis HOM05D008835 ORTHO05D011094 3.1e-46 190.7 194 55.7
Prupe.1G333800 Prunus persica HOM05D008835 ORTHO05D011094 3.3e-40 170.6 190 52.6
Cc11_g07380 Coffea canephora HOM05D008835 ORTHO05D011094 7.4e-40 169.5 198 42.9
CSS0047579 Camellia sinensis var. sinensis HOM05D008835 ORTHO05D011094 1.0e-36 159.1 196 47.4
RcHm_v2.0_Chr4g0443001 Rosa chinensis HOM05D008835 ORTHO05D011094 9.4e-35 152.5 192 50.0
Dinv10471 Davidia involucrata HOM05D008835 ORTHO05D011094 3.3e-32 144.1 194 45.9
Nn4g26594 Nelumbo nucifera HOM05D008835 ORTHO05D011094 6.3e-31 139.8 118 50.8
COL.COLO4_16597 Corchorus olitorius HOM05D002001 ORTHO05D006833 1.3e-23 115.5 191 40.3
Hma1.2p1_0277F.1_g111660 Hydrangea macrophylla HOM05D008835 ORTHO05D011094 3.7e-23 114.0 194 40.2
Hma1.2p1_0277F.1_g111665 Hydrangea macrophylla HOM05D008835 ORTHO05D011094 3.7e-23 114.0 194 40.2
CsaV3_5G014350 Cucumis sativus L. HOM05D008835 ORTHO05D011094 4.1e-22 110.5 194 30.4
Gohir.D01G139800 Gossypium hirsutum HOM05D008835 ORTHO05D011094 9.1e-22 109.4 190 39.5
Gorai.002G171900 Gossypium raimondii HOM05D008835 ORTHO05D011094 9.1e-22 109.4 190 39.5
TAR374G1374 Trochodendron aralioides HOM05D008835 ORTHO05D011094 2.2e-20 104.8 92 51.1
Gohir.A01G146600 Gossypium hirsutum HOM05D008835 ORTHO05D011094 9.4e-19 99.4 190 37.4
Cc11_g07320 Coffea canephora HOM05D008835 ORTHO05D011094 2.1e-18 98.2 113 46.0
ClCG07G005540 Citrullus lanatus HOM05D008835 ORTHO05D011094 2.7e-18 97.8 113 38.9
Lj3P864T25 Lonicera japonica HOM05D008835 ORTHO05D011094 9.8e-16 89.4 82 51.2
Sed0018402 Sechium edule HOM05D008835 ORTHO05D011094 9.8e-16 89.4 194 33.5
Thecc.02G293200 Theobroma cacao HOM05D008835 ORTHO05D030527 2.7e-13 81.3 53 67.9
RcHm_v2.0_Chr2g0123271 Rosa chinensis HOM05D008835 ORTHO05D011094 1.7e-12 78.6 83 48.2
ATR0753G127 Amborella trichopoda HOM05D008835 ORTHO05D011094 2.9e-12 77.8 90 42.2
Actinidia34037 Actinidia chinensis HOM05D008835 ORTHO05D011094 5.6e-11 73.6 48 62.5
Nn5g29409 Nelumbo nucifera HOM05D007063 ORTHO05D008822 2.8e-10 71.2 125 29.6
Actinidia14742 Actinidia chinensis HOM05D008483 ORTHO05D018225 6.1e-10 70.1 173 28.3
Eucgr.E03144 Eucalyptus grandis HOM05D002986 ORTHO05D007611 1.8e-09 68.6 166 29.5
Medtr8g463610 Medicago truncatula HOM05D006503 ORTHO05D008116 1.2e-08 65.9 203 24.1
arahy.Tifrunner.gnm1.ann1.M3C1JT Arachis hypogaea HOM05D006739 ORTHO05D008402 2.6e-08 64.7 163 24.5
AUR62000377 Chenopodium quinoa HOM05D000162 ORTHO05D000090 2.6e-08 64.7 157 25.5
Gorai.013G000300 Gossypium raimondii HOM05D007063 ORTHO05D008822 2.6e-08 64.7 139 27.3
CDE06G1744 Ceratophyllum demersum HOM05D000591 ORTHO05D000579 3.4e-08 64.3 190 24.2
HanXRQChr07g0199321 Helianthus annuus HOM05D006569 ORTHO05D007515 3.4e-08 64.3 120 31.7
Lsat_1_v5_gn_5_103340 Lactuca sativa HOM05D007570 ORTHO05D009365 3.4e-08 64.3 217 28.1
Rhsim05G0175800 Rhododendron simsii HOM05D002479 ORTHO05D002675 7.5e-08 63.2 187 24.1
Dinv40602 Davidia involucrata HOM05D002986 ORTHO05D007611 9.8e-08 62.8 81 39.5
CANSAT56G0123 Cannabis sativa HOM05D000001 ORTHO05D009952 1.3e-07 62.4 194 21.6
Gohir.D08G158800 Gossypium hirsutum HOM05D000104 ORTHO05D008354 1.3e-07 62.4 156 35.9
SEGI_06165 Sequoiadendron giganteum HOM05D007655 ORTHO05D009698 1.3e-07 62.4 194 24.2
ECA240G1124 Erigeron canadensis HOM05D005398 ORTHO05D000476 1.7e-07 62.0 178 24.2
Oeu044008.1 Olea europaea HOM05D008835 ORTHO05D011094 1.7e-07 62.0 50 52.0
AUR62000391 Chenopodium quinoa HOM05D000162 ORTHO05D000090 2.2e-07 61.6 149 28.9
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 2.2e-07 61.6 94 26.6
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 2.2e-07 61.6 94 26.6
DCAR_010898 Daucus carota HOM05D000001 ORTHO05D000003 2.2e-07 61.6 183 25.7
PSO832G3824 Papaver somniferum HOM05D007155 ORTHO05D003034 2.2e-07 61.6 95 30.5
Peaxi162Scf00020g00092 Petunia axillaris HOM05D000001 ORTHO05D000003 2.2e-07 61.6 191 25.7
Actinidia23531 Actinidia chinensis HOM05D000424 ORTHO05D038032 2.9e-07 61.2 141 31.9
CSS0039062 Camellia sinensis var. sinensis HOM05D006556 ORTHO05D008146 3.7e-07 60.8 94 37.2
Eucgr.G02802 Eucalyptus grandis HOM05D005287 ORTHO05D006893 3.7e-07 60.8 111 29.7
Nn5g30586 Nelumbo nucifera HOM05D005287 ORTHO05D006893 3.7e-07 60.8 117 26.5
Atru.chr12.1036 Acer truncatum HOM05D007410 ORTHO05D009500 4.9e-07 60.5 141 24.1
Glyma.01G073500 Glycine max HOM05D000104 ORTHO05D009920 4.9e-07 60.5 156 33.3
Lalb_Chr02g0153641 Lupinus albus HOM05D000855 ORTHO05D008530 4.9e-07 60.5 196 29.1
QL09p049934 Quercus lobata HOM05D004255 ORTHO05D004815 4.9e-07 60.5 183 26.8
Rhsim08G0158000 Rhododendron simsii HOM05D000001 ORTHO05D000003 4.9e-07 60.5 193 23.8
Actinidia05655 Actinidia chinensis HOM05D002986 ORTHO05D007611 6.4e-07 60.1 81 38.3
ECA234G3389 Erigeron canadensis HOM05D002986 ORTHO05D007611 6.4e-07 60.1 81 38.3
RcHm_v2.0_Chr4g0408211 Rosa chinensis HOM05D008684 ORTHO05D010796 6.4e-07 60.1 72 37.5
HanXRQChr11g0346401 Helianthus annuus HOM05D002986 ORTHO05D007611 8.3e-07 59.7 74 39.2
PSO210G6432 Papaver somniferum HOM05D007155 ORTHO05D003034 8.3e-07 59.7 95 29.5
Aa31LG3G2070 Aethionema arabicum HOM05D000855 ORTHO05D008530 1.1e-06 59.3 196 23.5
Dinv17357 Davidia involucrata HOM05D002986 ORTHO05D007611 1.1e-06 59.3 81 38.3
SGA_v2.0_scaffold114G31953 Striga asiatica HOM05D000001 ORTHO05D009545 1.4e-06 58.9 117 24.8
TWI63G1258 Tripterygium wilfordii HOM05D002986 ORTHO05D007611 1.4e-06 58.9 78 37.2
BcaB03g12921 Brassica carinata HOM05D007639 ORTHO05D009509 1.8e-06 58.5 196 30.6
CARHR084060 Cardamine hirsuta HOM05D000855 ORTHO05D008530 1.8e-06 58.5 196 21.9
ECA233G1567 Erigeron canadensis HOM05D003975 ORTHO05D009762 1.8e-06 58.5 111 27.9
SGA_v2.0_scaffold223G42824 Striga asiatica HOM05D005337 ORTHO05D006567 1.8e-06 58.5 116 25.9
Atru.chr10.1787 Acer truncatum HOM05D002986 ORTHO05D007611 2.4e-06 58.2 76 39.5
EL10Ac8g20438 Beta vulgaris HOM05D002986 ORTHO05D007611 2.4e-06 58.2 82 36.6
BolC3t19678H Brassica oleracea HOM05D006174 ORTHO05D007987 2.4e-06 58.2 124 28.2
AUR62000390 Chenopodium quinoa HOM05D000162 ORTHO05D000090 2.4e-06 58.2 144 25.0
DCAR_007997 Daucus carota HOM05D002986 ORTHO05D007611 2.4e-06 58.2 74 40.5
Phvul.007G163500 Phaseolus vulgaris HOM05D000855 ORTHO05D008530 2.4e-06 58.2 144 24.3
SEGI_29272 Sequoiadendron giganteum HOM05D007291 ORTHO05D009038 2.4e-06 58.2 124 24.2
AUR62006791 Chenopodium quinoa HOM05D000162 ORTHO05D000090 3.2e-06 57.8 157 25.5
ECA238G0365 Erigeron canadensis HOM05D000001 ORTHO05D009545 3.2e-06 57.8 117 26.5
Potri.001G171300 Populus trichocarpa HOM05D000891 ORTHO05D000761 3.2e-06 57.8 118 25.4
vmacro20006 Vaccinium macrocarpon HOM05D002479 ORTHO05D002675 3.2e-06 57.8 188 22.3
VMungo0720G3091 Vigna mungo HOM05D000855 ORTHO05D008530 3.2e-06 57.8 144 24.3
EL10Ac2g03647 Beta vulgaris HOM05D007570 ORTHO05D009365 4.1e-06 57.4 223 26.9
BcaB05g22690 Brassica carinata HOM05D000162 ORTHO05D000003 4.1e-06 57.4 103 34.0
Cpa.g.sc909.2 Carica papaya HOM05D007570 ORTHO05D009365 4.1e-06 57.4 127 24.4
MELO3C009348.2 Cucumis melo HOM05D004255 ORTHO05D004815 4.1e-06 57.4 114 28.9
Migut.O00416 Erythranthe guttata HOM05D007570 ORTHO05D009365 4.1e-06 57.4 186 23.1
MBI09_g46001_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 4.1e-06 57.4 188 25.0
Solyc03g120460.4 Solanum lycopersicum HOM05D000001 ORTHO05D009971 4.1e-06 57.4 116 29.3
Solyc04g010060.2 Solanum lycopersicum HOM05D007620 ORTHO05D009568 4.1e-06 57.4 95 34.7
Dinv40321 Davidia involucrata HOM05D007570 ORTHO05D009365 5.4e-06 57.0 222 24.8
Lsat_1_v5_gn_2_86820 Lactuca sativa HOM05D000001 ORTHO05D009545 5.4e-06 57.0 108 25.9
MBI09_g44717_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 5.4e-06 57.0 188 24.5
Nitab4.5_0000256g0090 Nicotiana tabacum HOM05D007893 ORTHO05D010042 5.4e-06 57.0 122 27.9
RcHm_v2.0_Chr5g0002401 Rosa chinensis HOM05D000001 ORTHO05D009952 5.4e-06 57.0 121 29.8
Actinidia13695 Actinidia chinensis HOM05D007496 ORTHO05D018209 7.0e-06 56.6 106 30.2
arahy.Tifrunner.gnm1.ann1.0N6WQ2 Arachis hypogaea HOM05D000855 ORTHO05D008530 7.0e-06 56.6 176 26.7
AUR62006756 Chenopodium quinoa HOM05D000162 ORTHO05D000090 7.0e-06 56.6 157 25.5
CsaV3_3G035890 Cucumis sativus L. HOM05D004255 ORTHO05D004815 7.0e-06 56.6 114 28.1
Glyma.18G151600 Glycine max HOM05D000001 ORTHO05D000003 7.0e-06 56.6 193 25.4
Psat5g195920 Pisum sativum HOM05D006888 ORTHO05D008371 7.0e-06 56.6 59 37.3
THA.LOC104798403 Tarenaya hassleriana HOM05D002986 ORTHO05D007611 7.0e-06 56.6 113 27.4
VMungo1215G1169 Vigna mungo HOM05D007173 ORTHO05D009151 7.0e-06 56.6 160 26.2
GSVIVG01025536001 Vitis vinifera HOM05D000855 ORTHO05D008530 7.0e-06 56.6 196 22.4
Ah.09g237590 Amaranthus hybridus HOM05D002986 ORTHO05D007611 9.2e-06 56.2 76 38.2
CANSAT01G0694 Cannabis sativa HOM05D000001 ORTHO05D009545 9.2e-06 56.2 117 26.5
CDE02G0175 Ceratophyllum demersum HOM05D003774 ORTHO05D009174 9.2e-06 56.2 151 32.5
FAN14G2211 Fragaria x ananassa HOM05D000855 ORTHO05D008530 9.2e-06 56.2 193 23.8
FAN21G3095 Fragaria x ananassa HOM05D000162 ORTHO05D000090 9.2e-06 56.2 147 27.2
Glyma.10G049200 Glycine max HOM05D000855 ORTHO05D008530 9.2e-06 56.2 153 23.5
Medtr5g039700 Medicago truncatula HOM05D006503 ORTHO05D008116 9.2e-06 56.2 142 25.4
Phvul.009G215700 Phaseolus vulgaris HOM05D007173 ORTHO05D009151 9.2e-06 56.2 153 27.5
RhsimUnG0180400 Rhododendron simsii HOM05D007063 ORTHO05D008822 9.2e-06 56.2 102 31.4
RhsimUnG0211600 Rhododendron simsii HOM05D007063 ORTHO05D008822 9.2e-06 56.2 102 31.4
Sed0000822 Sechium edule HOM05D002986 ORTHO05D007611 9.2e-06 56.2 81 38.3
SMO356G0401 Selaginella moellendorffii HOM05D007128 ORTHO05D000761 9.2e-06 56.2 188 22.3
TPR.G16108 Trifolium pratense HOM05D006503 ORTHO05D008116 9.2e-06 56.2 133 20.3


User provided reference genes

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