Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G7810 Aethionema arabicum HOM05D007103 ORTHO05D008948 1.1e-249 866.3 484 100.0
Sp2g13560 Schrenkiella parvula HOM05D007103 ORTHO05D008948 5.2e-191 671.4 456 82.0
AL5G11410 Arabidopsis lyrata HOM05D007103 ORTHO05D008948 8.3e-189 664.1 453 81.9
Carub.0005s0121 Capsella rubella HOM05D007103 ORTHO05D008948 6.0e-187 657.9 453 79.2
AT2G02148 Arabidopsis thaliana HOM05D007103 ORTHO05D008948 4.9e-181 638.3 450 80.0
CARHR144820 Cardamine hirsuta HOM05D007103 ORTHO05D008948 1.2e-171 607.1 455 79.6
Thhalv10004194m.g Eutrema salsugineum HOM05D007103 ORTHO05D008948 3.5e-171 605.5 461 77.4
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 3.9e-170 602.1 458 72.3
BcaB07g30707 Brassica carinata HOM05D007103 ORTHO05D008948 1.5e-169 600.1 453 75.3
BraA09t37988Z Brassica rapa HOM05D007103 ORTHO05D008948 1.1e-167 594.0 455 73.4
BcaC04g21529 Brassica carinata HOM05D007103 ORTHO05D008948 3.1e-167 592.4 456 74.8
C09p30690 Brassica napus HOM05D007103 ORTHO05D008948 5.3e-167 591.7 456 73.9
BolC9t55934H Brassica oleracea HOM05D007103 ORTHO05D008948 2.0e-166 589.7 456 73.7
A09p23820 Brassica napus HOM05D007103 ORTHO05D008948 3.8e-165 585.5 455 72.7
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 4.1e-143 512.3 466 61.8
Manes.10G065901 Manihot esculenta HOM05D007103 ORTHO05D008948 2.9e-141 506.1 462 62.6
MELO3C005211.2 Cucumis melo HOM05D007103 ORTHO05D008948 1.2e-139 500.7 465 63.4
GSVIVG01010248001 Vitis vinifera HOM05D007103 ORTHO05D008948 5.7e-137 491.9 464 62.3
CsaV3_5G017430 Cucumis sativus L. HOM05D007103 ORTHO05D008948 5.3e-135 485.3 465 61.3
Thecc.02G296200 Theobroma cacao HOM05D007103 ORTHO05D008948 2.0e-134 483.4 465 62.2
Cfa015108 Carpinus fangiana HOM05D007103 ORTHO05D008948 1.3e-133 480.7 460 61.5
Sed0022925 Sechium edule HOM05D007103 ORTHO05D008948 1.1e-132 477.6 463 61.6
Haze_01571 Corylus avellana HOM05D007103 ORTHO05D008948 1.4e-132 477.2 460 60.9
BcaB07g30709 Brassica carinata HOM05D007103 ORTHO05D008948 1.2e-131 474.2 429 64.8
Gorai.002G168100 Gossypium raimondii HOM05D007103 ORTHO05D008948 2.3e-130 469.9 464 60.3
Gohir.A01G145152 Gossypium hirsutum HOM05D007103 ORTHO05D008948 8.8e-130 468.0 464 60.1
Prupe.1G342500 Prunus persica HOM05D007103 ORTHO05D008948 1.1e-129 467.6 473 58.8
Gohir.D01G137900 Gossypium hirsutum HOM05D007103 ORTHO05D008948 1.5e-129 467.2 464 60.1
COL.COLO4_27515 Corchorus olitorius HOM05D007103 ORTHO05D008948 7.4e-129 464.9 450 58.2
PGR044G1063 Punica granatum HOM05D007103 ORTHO05D008948 7.4e-129 464.9 455 61.3
TAR371G1171 Trochodendron aralioides HOM05D007103 ORTHO05D008948 1.3e-128 464.2 457 59.5
Dinv06214 Davidia involucrata HOM05D007103 ORTHO05D008948 2.2e-128 463.4 457 60.2
Ciclev10005118m.g Citrus clementina HOM05D007103 ORTHO05D008948 1.5e-126 457.2 398 68.3
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 2.6e-126 456.4 449 57.0
QL03p041867 Quercus lobata HOM05D007103 ORTHO05D008948 2.9e-125 453.0 460 62.6
Eucgr.B02623 Eucalyptus grandis HOM05D007103 ORTHO05D008948 6.5e-125 451.8 458 61.6
Lj3A854G74 Lonicera japonica HOM05D007103 ORTHO05D008948 1.2e-123 447.6 478 57.3
HanXRQChr14g0446891 Helianthus annuus HOM05D007103 ORTHO05D008948 2.7e-123 446.4 454 57.5
RcHm_v2.0_Chr4g0446051 Rosa chinensis HOM05D007103 ORTHO05D008948 4.7e-123 445.7 470 59.1
arahy.Tifrunner.gnm1.ann1.CDY64E Arachis hypogaea HOM05D007103 ORTHO05D008948 3.9e-122 442.6 461 57.0
arahy.Tifrunner.gnm1.ann1.U7H2Z0 Arachis hypogaea HOM05D007103 ORTHO05D008948 1.5e-121 440.7 461 56.8
PSO478G2004 Papaver somniferum HOM05D007103 ORTHO05D008948 9.7e-121 438.0 460 57.8
CANSAT78G0644 Cannabis sativa HOM05D007103 ORTHO05D008948 1.3e-120 437.6 457 57.5
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 3.7e-120 436.0 446 56.5
Glyma.05G135400 Glycine max HOM05D007103 ORTHO05D008948 1.1e-119 434.5 462 55.0
Potri.008G143700 Populus trichocarpa HOM05D007103 ORTHO05D008948 2.0e-118 430.3 420 56.4
Nn3g18722 Nelumbo nucifera HOM05D007103 ORTHO05D008948 5.9e-118 428.7 419 61.1
HPP92_022082 Vanilla planifolia HOM05D007103 ORTHO05D008948 1.3e-117 427.6 461 56.6
MD13G1010500 Malus domestica HOM05D007103 ORTHO05D008948 3.8e-117 426.0 487 54.2
CDE08G0078 Ceratophyllum demersum HOM05D007103 ORTHO05D008948 1.5e-116 424.1 466 54.7
Nitab4.5_0000129g0430 Nicotiana tabacum HOM05D007103 ORTHO05D008948 9.4e-116 421.4 460 59.6
CiPaw.05G161900 Carya illinoinensis HOM05D007103 ORTHO05D008948 1.6e-115 420.6 321 67.3
DCAR_030327 Daucus carota HOM05D007103 ORTHO05D008948 6.1e-115 418.7 463 55.1
Rhsim04G0168800 Rhododendron simsii HOM05D007103 ORTHO05D008948 2.3e-114 416.8 522 50.6
Sopen04g003720 Solanum pennellii HOM05D007103 ORTHO05D008948 4.0e-114 416.0 467 58.0
ClCG01G007020 Citrullus lanatus HOM05D007103 ORTHO05D008948 5.2e-114 415.6 342 64.6
ATR0618G149 Amborella trichopoda HOM05D007103 ORTHO05D008948 1.5e-113 414.1 454 54.8
Solyc04g008560.3 Solanum lycopersicum HOM05D007103 ORTHO05D008948 2.0e-113 413.7 467 57.8
MSTRG.2093 Avicennia marina HOM05D007103 ORTHO05D008948 2.6e-113 413.3 466 53.6
PGSC0003DMG400031375 Solanum tuberosum HOM05D007103 ORTHO05D008948 2.6e-113 413.3 467 58.0
Peaxi162Scf00329g00938 Petunia axillaris HOM05D007103 ORTHO05D008948 7.5e-113 411.8 459 57.5
FAN17G1256 Fragaria x ananassa HOM05D007103 ORTHO05D008948 3.1e-111 406.4 474 55.9
Nitab4.5_0007973g0020 Nicotiana tabacum HOM05D007103 ORTHO05D008948 4.1e-111 406.0 460 56.3
FAN07G2615 Fragaria x ananassa HOM05D007103 ORTHO05D008948 3.5e-110 402.9 451 57.4
MBI06_g12320_MAGBIO Magnolia biondii HOM05D007103 ORTHO05D008948 1.0e-109 401.4 323 64.7
Ca_18212_v3 Cicer arietinum L. HOM05D007103 ORTHO05D008948 1.3e-109 401.0 458 53.3
Lalb_Chr13g0293061 Lupinus albus HOM05D007103 ORTHO05D008948 2.2e-109 400.2 468 51.7
FAN12G1264 Fragaria x ananassa HOM05D007103 ORTHO05D008948 2.9e-109 399.8 451 57.4
Psat7g086680 Pisum sativum HOM05D007103 ORTHO05D008948 3.8e-109 399.4 458 52.0
Lj4g0001083 Lotus japonicus HOM05D007103 ORTHO05D008948 4.2e-108 396.0 449 52.6
CAN.G458.2 Capsicum annuum HOM05D007103 ORTHO05D008948 2.7e-107 393.3 407 57.0
Migut.E00576 Erythranthe guttata HOM05D007103 ORTHO05D008948 1.4e-103 380.9 500 49.6
ECA246G2851 Erigeron canadensis HOM05D007103 ORTHO05D008948 5.4e-103 379.0 445 51.7
Glyma.08G090600 Glycine max HOM05D007103 ORTHO05D008948 1.6e-102 377.5 391 54.7
unitig_8.g4025 Utricularia gibba HOM05D007103 ORTHO05D008948 1.6e-102 377.5 461 51.6
AUR62003469 Chenopodium quinoa HOM05D007103 ORTHO05D008948 3.5e-102 376.3 445 51.5
Sc03g0005470 Simmondsia chinensis HOM05D007103 ORTHO05D008948 1.5e-100 370.9 458 51.3
SGA_v2.0_scaffold127G33990 Striga asiatica HOM05D007103 ORTHO05D008948 1.9e-100 370.5 461 50.3
TPR.G34765 Trifolium pratense HOM05D007103 ORTHO05D008948 2.5e-100 370.2 471 53.9
Lsat_1_v5_gn_3_27560 Lactuca sativa HOM05D007103 ORTHO05D008948 2.8e-99 366.7 448 53.8
Phvul.002G186800 Phaseolus vulgaris HOM05D007103 ORTHO05D008948 2.3e-98 363.6 448 49.1
Ciclev10010767m.g Citrus clementina HOM05D007103 ORTHO05D008948 2.6e-97 360.1 252 71.8
Aqoxy3G00022 Aquilegia oxysepala HOM05D007103 ORTHO05D008948 5.7e-97 359.0 393 56.2
Actinidia32355 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.7e-96 357.5 359 56.0
vmacro08589 Vaccinium macrocarpon HOM05D007103 ORTHO05D008948 2.8e-96 356.7 346 57.2
AUR62017776 Chenopodium quinoa HOM05D007103 ORTHO05D008948 5.0e-93 345.9 416 50.5
FvH4_4g36300 Fragaria vesca HOM05D007103 ORTHO05D008948 8.0e-91 338.6 332 57.2
EL10Ac6g15409 Beta vulgaris HOM05D007103 ORTHO05D008948 1.4e-90 337.8 526 43.7
PSO017G4620 Papaver somniferum HOM05D007103 ORTHO05D008948 3.1e-90 336.7 377 51.7
FAN22G0934 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.2e-86 324.7 416 48.3
Zm00001eb228800 Zea mays HOM05D007103 ORTHO05D008948 1.3e-85 321.2 397 49.6
VMungo0251G2627 Vigna mungo HOM05D007103 ORTHO05D008948 3.0e-85 320.1 389 48.8
SEGI_34932 Sequoiadendron giganteum HOM05D007103 ORTHO05D008948 1.7e-80 304.3 298 54.7
Mapoly0001s0015 Marchantia polymorpha HOM05D007103 ORTHO05D008948 1.7e-77 294.3 485 41.2
SalBow2G1702 Salvia bowleyana HOM05D007103 ORTHO05D008948 7.3e-76 288.9 278 58.3
Pp3c6_26300 Physcomitrium patens HOM05D007103 ORTHO05D008948 7.5e-73 278.9 472 44.3
Pp3c5_2140 Physcomitrium patens HOM05D007103 ORTHO05D008948 2.1e-70 270.8 476 42.9
SMO358G0481 Selaginella moellendorffii HOM05D007103 ORTHO05D008948 8.6e-69 265.4 457 37.6
Atru.chr11.1054 Acer truncatum HOM05D007103 ORTHO05D008948 1.6e-67 261.2 424 46.5
Actinidia25204 Actinidia chinensis HOM05D007103 ORTHO05D008948 6.8e-66 255.8 182 71.4
AagrBONN_evm.TU.Sc2ySwM_368.3256 Anthoceros agrestis HOM05D007103 ORTHO05D008948 2.5e-52 210.7 228 49.1
CBR_g70721 Chara braunii HOM05D007103 ORTHO05D008948 1.1e-50 205.3 353 38.5
Cpa.g.sc2.105 Carica papaya HOM05D007103 ORTHO05D008948 1.4e-50 204.9 215 54.4
Medtr5g010860 Medicago truncatula HOM05D007103 ORTHO05D008948 1.3e-45 188.3 176 60.8
Aa31LG1G6410 Aethionema arabicum HOM05D007103 ORTHO05D008948 4.8e-43 179.9 152 67.8
Actinidia31381 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.1e-39 168.7 389 41.1
Pp3c6_29570 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.9e-31 141.4 171 46.2
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 3.1e-18 97.4 204 45.6
Hund18263 Selenicereus undatus HOM05D007103 ORTHO05D008948 2.0e-17 94.7 186 40.9
Cpa.g.sc2.103 Carica papaya HOM05D007103 ORTHO05D008948 6.1e-14 83.2 62 69.4
CAN.G166.15 Capsicum annuum HOM05D007103 ORTHO05D008948 3.2e-07 60.8 87 40.2
Medtr6g043130 Medicago truncatula HOM05D007103 ORTHO05D008948 6.1e-06 56.6 41 61.0


User provided reference genes

Program Settings