Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G7610 Aethionema arabicum HOM05D005661 ORTHO05D007997 7.9e-169 597.0 305 100.0
Sp2g13750 Schrenkiella parvula HOM05D005661 ORTHO05D007997 1.5e-143 513.1 309 86.4
CARHR145060 Cardamine hirsuta HOM05D005661 ORTHO05D007997 3.1e-141 505.4 309 85.4
Thhalv10004647m.g Eutrema salsugineum HOM05D005661 ORTHO05D007997 1.6e-140 503.1 311 84.2
BcaB07g30331 Brassica carinata HOM05D005661 ORTHO05D007997 6.5e-139 497.7 313 83.1
BcaC03g17145 Brassica carinata HOM05D005661 ORTHO05D007997 1.1e-138 496.9 310 84.2
Carub.0005s0153 Capsella rubella HOM05D005661 ORTHO05D007997 5.5e-138 494.6 309 83.5
A02p32920 Brassica napus HOM05D005661 ORTHO05D007997 2.1e-137 492.7 310 83.9
BolC2t11148H Brassica oleracea HOM05D005661 ORTHO05D007997 2.7e-137 492.3 311 83.9
AT2G02500 Arabidopsis thaliana HOM05D005661 ORTHO05D007997 6.1e-137 491.1 309 84.1
AL5G11770 Arabidopsis lyrata HOM05D005661 ORTHO05D007997 9.7e-135 483.8 309 82.8
C02p50650 Brassica napus HOM05D005661 ORTHO05D007997 4.8e-134 481.5 339 77.0
BraA02t08315Z Brassica rapa HOM05D005661 ORTHO05D007997 4.1e-133 478.4 311 81.7
THA.LOC104801778 Tarenaya hassleriana HOM05D005661 ORTHO05D007997 1.8e-128 463.0 308 79.5
Solyc01g102820.4 Solanum lycopersicum HOM05D005661 ORTHO05D007997 1.8e-109 399.8 294 70.1
Sopen01g045220 Solanum pennellii HOM05D005661 ORTHO05D007997 1.8e-109 399.8 294 70.1
HanXRQChr05g0153021 Helianthus annuus HOM05D005661 ORTHO05D007997 3.2e-109 399.1 305 69.5
Nitab4.5_0006159g0030 Nicotiana tabacum HOM05D005661 ORTHO05D007997 3.9e-107 392.1 251 78.5
PGSC0003DMG401018218 Solanum tuberosum HOM05D005661 ORTHO05D007997 3.9e-107 392.1 294 69.7
CAN.G1379.8 Capsicum annuum HOM05D005661 ORTHO05D007997 5.0e-107 391.7 251 77.7
Migut.B00706 Erythranthe guttata HOM05D005661 ORTHO05D007997 6.6e-107 391.3 298 69.5
Nitab4.5_0001085g0130 Nicotiana tabacum HOM05D005661 ORTHO05D007997 1.1e-106 390.6 251 78.5
Potri.004G230200 Populus trichocarpa HOM05D005661 ORTHO05D007997 1.1e-106 390.6 299 69.6
Ciclev10002035m.g Citrus clementina HOM05D005661 ORTHO05D007997 4.3e-106 388.7 252 77.8
Peaxi162Scf00194g01045 Petunia axillaris HOM05D005661 ORTHO05D007997 4.3e-106 388.7 231 82.7
Gorai.010G134700 Gossypium raimondii HOM05D005661 ORTHO05D007997 5.6e-106 388.3 267 73.8
Oeu000159.1 Olea europaea HOM05D005661 ORTHO05D007997 5.6e-106 388.3 267 74.2
Gohir.A06G112500 Gossypium hirsutum HOM05D005661 ORTHO05D007997 2.1e-105 386.3 301 68.4
Thecc.06G064100 Theobroma cacao HOM05D005661 ORTHO05D007997 1.0e-104 384.0 285 70.2
Gohir.D06G117100 Gossypium hirsutum HOM05D005661 ORTHO05D007997 1.8e-104 383.3 301 68.4
GSVIVG01023131001 Vitis vinifera HOM05D005661 ORTHO05D007997 1.8e-104 383.3 292 69.2
Manes.14G146200 Manihot esculenta HOM05D005661 ORTHO05D007997 4.0e-104 382.1 308 65.9
Manes.14G166900 Manihot esculenta HOM05D005661 ORTHO05D007997 4.0e-104 382.1 288 68.1
Lsat_1_v5_gn_9_124861 Lactuca sativa HOM05D005661 ORTHO05D007997 8.9e-104 380.9 257 75.5
Aqoxy1G02010 Aquilegia oxysepala HOM05D005661 ORTHO05D007997 3.4e-103 379.0 256 74.6
ECA246G0516 Erigeron canadensis HOM05D005661 ORTHO05D007997 2.9e-102 375.9 282 69.9
PGR142G1782 Punica granatum HOM05D005661 ORTHO05D007997 3.7e-102 375.6 243 75.7
RcHm_v2.0_Chr7g0218881 Rosa chinensis HOM05D005661 ORTHO05D007997 4.9e-102 375.2 255 74.1
MSTRG.16459 Avicennia marina HOM05D005661 ORTHO05D007997 6.4e-102 374.8 272 71.0
MSTRG.20341 Avicennia marina HOM05D005661 ORTHO05D007997 1.4e-101 373.6 289 68.5
FAN08G1685 Fragaria x ananassa HOM05D005661 ORTHO05D007997 1.4e-101 373.6 317 64.4
CSS0021874 Camellia sinensis var. sinensis HOM05D005661 ORTHO05D007997 1.9e-101 373.2 264 72.7
Eucgr.I02806 Eucalyptus grandis HOM05D005661 ORTHO05D007997 1.9e-101 373.2 304 64.8
HanXRQChr09g0249911 Helianthus annuus HOM05D005661 ORTHO05D007997 1.6e-100 370.2 223 82.1
FvH4_5g27480 Fragaria vesca HOM05D005661 ORTHO05D007997 2.0e-100 369.8 310 65.2
FAN04G2212 Fragaria x ananassa HOM05D005661 ORTHO05D007997 2.7e-100 369.4 259 73.0
QL02p103676 Quercus lobata HOM05D005661 ORTHO05D007997 2.7e-100 369.4 268 71.3
MD15G1444200 Malus domestica HOM05D005661 ORTHO05D007997 3.5e-100 369.0 230 79.1
Psat0s2555g0200 Pisum sativum HOM05D005661 ORTHO05D007997 3.5e-100 369.0 249 74.7
TWI23G0175 Tripterygium wilfordii HOM05D005661 ORTHO05D007997 3.5e-100 369.0 307 64.2
Cc02_g23630 Coffea canephora HOM05D005661 ORTHO05D007997 4.6e-100 368.6 293 67.9
Actinidia11729 Actinidia chinensis HOM05D005661 ORTHO05D007997 6.0e-100 368.2 318 63.2
Dinv38445 Davidia involucrata HOM05D005661 ORTHO05D007997 3.0e-99 365.9 306 63.4
FAN13G1518 Fragaria x ananassa HOM05D005661 ORTHO05D007997 3.9e-99 365.5 271 70.8
TPR.G5996 Trifolium pratense HOM05D005661 ORTHO05D007997 3.9e-99 365.5 261 72.0
Cfa004424 Carpinus fangiana HOM05D005661 ORTHO05D007997 6.6e-99 364.8 293 63.8
Nn5g27134 Nelumbo nucifera HOM05D005661 ORTHO05D007997 6.6e-99 364.8 274 67.5
TAR628G0241 Trochodendron aralioides HOM05D005661 ORTHO05D007997 8.6e-99 364.4 289 66.4
ATR1089G013 Amborella trichopoda HOM05D005661 ORTHO05D007997 1.1e-98 364.0 274 69.3
MD08G1249400 Malus domestica HOM05D005661 ORTHO05D007997 1.1e-98 364.0 231 77.9
unitig_21.g20570 Utricularia gibba HOM05D005661 ORTHO05D007997 1.1e-98 364.0 252 73.4
CsaV3_3G006740 Cucumis sativus L. HOM05D005661 ORTHO05D007997 1.9e-98 363.2 245 74.3
Prupe.1G586600 Prunus persica HOM05D005661 ORTHO05D007997 3.3e-98 362.5 294 65.6
Rhsim11G0115300 Rhododendron simsii HOM05D005661 ORTHO05D007997 1.2e-97 360.5 236 78.0
CANSAT01G0358 Cannabis sativa HOM05D005661 ORTHO05D007997 1.6e-97 360.1 306 63.7
DCAR_031998 Daucus carota HOM05D005661 ORTHO05D007997 2.1e-97 359.8 282 66.7
MELO3C016431.2 Cucumis melo HOM05D005661 ORTHO05D007997 8.1e-97 357.8 231 76.2
VMungo1215G1111 Vigna mungo HOM05D005661 ORTHO05D007997 2.3e-96 356.3 245 73.1
Glyma.17G002400 Glycine max HOM05D005661 ORTHO05D007997 6.8e-96 354.8 232 74.6
PSO210G4998 Papaver somniferum HOM05D005661 ORTHO05D007997 1.5e-95 353.6 294 64.3
SEGI_39309 Sequoiadendron giganteum HOM05D005661 ORTHO05D007997 1.5e-95 353.6 228 77.6
MBI06_g17067_MAGBIO Magnolia biondii HOM05D005661 ORTHO05D007997 3.4e-95 352.4 280 66.4
Sc09g0007750 Simmondsia chinensis HOM05D005661 ORTHO05D007997 5.8e-95 351.7 238 71.8
Sabra01G0175500 Salix brachista HOM05D005661 ORTHO05D007997 4.9e-94 348.6 359 56.0
DCAR_001732 Daucus carota HOM05D005661 ORTHO05D007997 2.4e-93 346.3 298 62.8
Zm00001eb365960 Zea mays HOM05D005661 ORTHO05D007997 9.2e-93 344.4 239 72.0
HPP92_003721 Vanilla planifolia HOM05D005661 ORTHO05D007997 1.6e-92 343.6 242 71.1
HPP92_003715 Vanilla planifolia HOM05D005661 ORTHO05D007997 2.1e-92 343.2 239 71.5
Phvul.003G090900 Phaseolus vulgaris HOM05D005661 ORTHO05D007997 6.0e-92 341.7 235 72.8
Lj4g0018255 Lotus japonicus HOM05D005661 ORTHO05D007997 3.0e-91 339.3 263 66.2
AUR62042241 Chenopodium quinoa HOM05D005661 ORTHO05D007997 1.9e-90 336.7 313 60.4
Zm00001eb145390 Zea mays HOM05D005661 ORTHO05D007997 1.9e-90 336.7 226 73.9
COL.COLO4_31208 Corchorus olitorius HOM05D005661 ORTHO05D007997 7.3e-90 334.7 207 79.7
Mapoly0006s0146 Marchantia polymorpha HOM05D005661 ORTHO05D007997 3.1e-88 329.3 248 68.5
Medtr4g134540 Medicago truncatula HOM05D005661 ORTHO05D007997 4.0e-88 328.9 217 75.1
Haze_09964 Corylus avellana HOM05D005661 ORTHO05D007997 1.7e-86 323.6 257 65.8
EL10Ac6g13962 Beta vulgaris HOM05D005661 ORTHO05D007997 2.9e-86 322.8 274 62.8
Dinv29650 Davidia involucrata HOM05D005661 ORTHO05D007997 3.8e-86 322.4 207 76.8
arahy.Tifrunner.gnm1.ann1.PPAS6H Arachis hypogaea HOM05D005661 ORTHO05D007997 4.9e-86 322.0 243 67.9
AUR62032486 Chenopodium quinoa HOM05D005661 ORTHO05D007997 1.4e-85 320.5 250 68.8
Lalb_Chr07g0176831 Lupinus albus HOM05D005661 ORTHO05D007997 3.2e-85 319.3 216 74.5
ClCG10G007530 Citrullus lanatus HOM05D005661 ORTHO05D007997 2.3e-83 313.2 337 53.4
Pp3c15_1010 Physcomitrium patens HOM05D005661 ORTHO05D007997 5.1e-83 312.0 222 69.8
SGA_v2.0_scaffold131G34439 Striga asiatica HOM05D005661 ORTHO05D007997 6.6e-83 311.6 278 63.7
arahy.Tifrunner.gnm1.ann1.FQN863 Arachis hypogaea HOM05D005661 ORTHO05D007997 1.5e-82 310.5 240 67.1
Pp3c9_590 Physcomitrium patens HOM05D005661 ORTHO05D007997 1.5e-82 310.5 226 69.0
Cpa.g.sc173.2 Carica papaya HOM05D005661 ORTHO05D007997 9.6e-82 307.8 217 71.9
SMO367G1090 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 2.1e-81 306.6 226 67.3
Ah.02g128470 Amaranthus hybridus HOM05D005661 ORTHO05D007997 9.9e-79 297.7 284 58.5
Ca_13523_v3 Cicer arietinum L. HOM05D005661 ORTHO05D007997 1.4e-77 293.9 193 75.1
vmacro01624 Vaccinium macrocarpon HOM05D005661 ORTHO05D007997 2.3e-75 286.6 309 55.3
Sed0000786 Sechium edule HOM05D005661 ORTHO05D007997 5.1e-75 285.4 196 73.0
CDE02G0980 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 1.6e-73 280.4 238 62.6
Cre16.g679669 Chlamydomonas reinhardtii HOM05D005661 ORTHO05D007997 1.2e-71 274.2 265 54.7
CiPaw.06G177000 Carya illinoinensis HOM05D005661 ORTHO05D007997 3.4e-71 272.7 212 65.1
MCO15G500 Micromonas commoda HOM05D005661 ORTHO05D007997 2.2e-70 270.0 248 58.5
CDE04G2298 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 7.1e-69 265.0 239 60.3
Os01g0887100 Oryza sativa ssp. japonica HOM05D005661 ORTHO05D007997 7.1e-69 265.0 172 74.4
Atru.chr6.139 Acer truncatum HOM05D005661 ORTHO05D007997 1.0e-67 261.2 219 65.3
Lj5A292T55 Lonicera japonica HOM05D005661 ORTHO05D007997 1.3e-67 260.8 207 66.7
Actinidia00142 Actinidia chinensis HOM05D005661 ORTHO05D007997 4.8e-57 225.7 209 58.9
Lj5A292T53 Lonicera japonica HOM05D005661 ORTHO05D007997 1.5e-50 204.1 171 62.6
CBR_g214 Chara braunii HOM05D005661 ORTHO05D007997 4.3e-50 202.6 177 58.2
AagrBONN_evm.TU.Sc2ySwM_362.430 Anthoceros agrestis HOM05D005661 ORTHO05D007997 1.1e-40 171.4 155 59.4
HanXRQChr03g0069601 Helianthus annuus HOM05D005661 ORTHO05D007997 1.5e-39 167.5 105 78.1
Hund15335 Selenicereus undatus HOM05D005661 ORTHO05D007997 1.5e-39 167.5 162 57.4
arahy.Tifrunner.gnm1.ann1.H0NKK3 Arachis hypogaea HOM05D005661 ORTHO05D007997 7.2e-37 158.7 116 69.8
AUR62030219 Chenopodium quinoa HOM05D005661 ORTHO05D007997 3.0e-35 153.3 168 54.2
Ca_21047_v3 Cicer arietinum L. HOM05D005661 ORTHO05D147477 2.2e-25 120.6 235 37.0
VMungo1364G0001 Vigna mungo HOM05D005661 ORTHO05D005421 7.0e-24 115.5 151 47.0
FvH4_5g27493 Fragaria vesca HOM05D005661 ORTHO05D007997 8.5e-22 108.6 257 36.2
SMO367G1054 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 3.2e-21 106.7 144 47.2
AagrBONN_evm.TU.Sc2ySwM_362.419 Anthoceros agrestis HOM05D005661 ORTHO05D007997 9.4e-21 105.1 65 73.8
FAN08G1519 Fragaria x ananassa HOM05D005661 ORTHO05D210776 3.0e-19 100.1 116 52.6
Haze_27119 Corylus avellana HOM05D005196 ORTHO05D006107 1.3e-17 94.7 246 29.3
FAN08G3692 Fragaria x ananassa HOM05D005661 ORTHO05D208506 1.1e-16 91.7 145 44.8
Ca_29126_v3 Cicer arietinum L. HOM05D005661 ORTHO05D148461 1.4e-16 91.3 219 30.6
HanXRQChr14g0444001 Helianthus annuus HOM05D005661 ORTHO05D007997 9.1e-16 88.6 62 66.1
CAN.G242.16 Capsicum annuum HOM05D005661 ORTHO05D007997 4.5e-15 86.3 56 66.1
Lj5A292T54 Lonicera japonica HOM05D005661 ORTHO05D007997 2.7e-12 77.0 49 71.4
FvH4_5g27491 Fragaria vesca HOM05D005661 ORTHO05D046262 9.8e-10 68.6 87 52.9
FAN08G0833 Fragaria x ananassa HOM05D005661 ORTHO05D203111 1.1e-08 65.1 60 58.3


User provided reference genes

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