Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G7600 Aethionema arabicum HOM05D005857 ORTHO05D007193 1.2e-38 162.5 76 100.0
Sp1g12820 Schrenkiella parvula HOM05D005857 ORTHO05D007193 2.8e-30 134.8 76 85.5
BcaB03g13096 Brassica carinata HOM05D005857 ORTHO05D007193 6.2e-30 133.7 76 84.2
BolC5t29979H Brassica oleracea HOM05D005857 ORTHO05D007193 1.1e-29 132.9 76 84.2
A06p10470 Brassica napus HOM05D005857 ORTHO05D007193 1.4e-29 132.5 76 84.2
C05p12250 Brassica napus HOM05D005857 ORTHO05D007193 1.4e-29 132.5 76 84.2
BraA06t24227Z Brassica rapa HOM05D005857 ORTHO05D007193 1.4e-29 132.5 76 84.2
CARHR014900 Cardamine hirsuta HOM05D005857 ORTHO05D007193 2.3e-29 131.7 76 82.9
AL1G26340 Arabidopsis lyrata HOM05D005857 ORTHO05D007193 3.1e-29 131.3 76 82.9
AT1G14450 Arabidopsis thaliana HOM05D005857 ORTHO05D007193 3.1e-29 131.3 76 82.9
BcaB07g30330 Brassica carinata HOM05D005857 ORTHO05D007193 3.1e-29 131.3 76 84.2
Carub.0001s1416 Capsella rubella HOM05D005857 ORTHO05D007193 3.1e-29 131.3 76 81.6
Thhalv10005238m.g Eutrema salsugineum HOM05D005857 ORTHO05D007193 3.1e-29 131.3 76 82.9
BcaB08g34397 Brassica carinata HOM05D005857 ORTHO05D007193 4.0e-29 131.0 76 81.6
Thhalv10009257m.g Eutrema salsugineum HOM05D005857 ORTHO05D007193 4.0e-29 131.0 76 82.9
C08p16740 Brassica napus HOM05D005857 ORTHO05D007193 2.0e-28 128.6 76 81.6
BcaC03g17146 Brassica carinata HOM05D005857 ORTHO05D007193 2.6e-28 128.3 76 81.6
C02p50660 Brassica napus HOM05D005857 ORTHO05D007193 3.4e-28 127.9 76 81.6
BolC2t11149H Brassica oleracea HOM05D005857 ORTHO05D007193 3.4e-28 127.9 76 81.6
BraA02t08316Z Brassica rapa HOM05D005857 ORTHO05D007193 3.4e-28 127.9 76 81.6
Carub.0005s0154 Capsella rubella HOM05D005857 ORTHO05D007193 3.4e-28 127.9 76 81.6
CARHR145070 Cardamine hirsuta HOM05D005857 ORTHO05D007193 3.4e-28 127.9 76 81.6
BcaC05g25348 Brassica carinata HOM05D005857 ORTHO05D007193 4.4e-28 127.5 76 81.6
AT2G02510 Arabidopsis thaliana HOM05D005857 ORTHO05D007193 5.8e-28 127.1 76 80.3
Sp2g13760 Schrenkiella parvula HOM05D005857 ORTHO05D007193 5.8e-28 127.1 76 78.9
THA.LOC104801779 Tarenaya hassleriana HOM05D005857 ORTHO05D007193 7.5e-28 126.7 72 81.9
THA.LOC104805131 Tarenaya hassleriana HOM05D005857 ORTHO05D007193 7.5e-28 126.7 72 80.6
Aa31LG1G600 Aethionema arabicum HOM05D005857 ORTHO05D007193 4.9e-27 124.0 76 80.3
AL5G11780 Arabidopsis lyrata HOM05D005857 ORTHO05D007193 4.9e-27 124.0 76 77.6
COL.COLO4_31107 Corchorus olitorius HOM05D005857 ORTHO05D007193 9.2e-26 119.8 76 73.7
QL02p103650 Quercus lobata HOM05D005857 ORTHO05D007193 3.9e-24 114.4 73 72.6
Thecc.06G020800 Theobroma cacao HOM05D005857 ORTHO05D007193 3.9e-24 114.4 65 78.5
TWI23G0165 Tripterygium wilfordii HOM05D005857 ORTHO05D007193 5.6e-23 110.5 74 67.6
Manes.14G164233 Manihot esculenta HOM05D005857 ORTHO05D007193 9.5e-23 109.8 64 75.0
BcaC07g41575 Brassica carinata HOM05D005857 ORTHO05D007193 1.2e-22 109.4 76 72.4
CANSAT01G1822 Cannabis sativa HOM05D005857 ORTHO05D007193 1.2e-22 109.4 74 66.2
CiPaw.06G177300 Carya illinoinensis HOM05D005857 ORTHO05D007193 1.2e-22 109.4 72 70.8
Duzib133G0295 Durio zibethinus HOM05D005857 ORTHO05D007193 1.2e-22 109.4 76 67.1
FvH4_5g27520 Fragaria vesca HOM05D005857 ORTHO05D007193 1.6e-22 109.0 63 76.2
PGR042G3007 Punica granatum HOM05D005857 ORTHO05D007193 3.6e-22 107.8 66 69.7
Potri.004G229900 Populus trichocarpa HOM05D005857 ORTHO05D007193 4.7e-22 107.5 68 73.5
Cpa.g.sc34.126 Carica papaya HOM05D005857 ORTHO05D007193 6.2e-22 107.1 67 71.6
AUR62040136 Chenopodium quinoa HOM05D005857 ORTHO05D007193 8.1e-22 106.7 68 75.0
Gohir.A05G160000 Gossypium hirsutum HOM05D005857 ORTHO05D007193 1.1e-21 106.3 59 78.0
Gohir.D05G162700 Gossypium hirsutum HOM05D005857 ORTHO05D007193 1.1e-21 106.3 59 78.0
Gorai.009G167700 Gossypium raimondii HOM05D005857 ORTHO05D007193 1.1e-21 106.3 59 78.0
CSS0043387 Camellia sinensis var. sinensis HOM05D005857 ORTHO05D007193 1.4e-21 105.9 61 75.4
RcHm_v2.0_Chr7g0218891 Rosa chinensis HOM05D005857 ORTHO05D007193 1.4e-21 105.9 68 72.1
TWI59G0768 Tripterygium wilfordii HOM05D005857 ORTHO05D007193 1.8e-21 105.5 74 64.9
Manes.06G013700 Manihot esculenta HOM05D005857 ORTHO05D007193 4.0e-21 104.4 64 70.3
CsaV3_5G027560 Cucumis sativus L. HOM05D005857 ORTHO05D007193 5.2e-21 104.0 59 78.0
PSO210G5758 Papaver somniferum HOM05D005857 ORTHO05D007193 5.2e-21 104.0 67 71.6
vmacro01623 Vaccinium macrocarpon HOM05D005857 ORTHO05D007193 5.2e-21 104.0 71 66.2
A02p32930 Brassica napus HOM05D005857 ORTHO05D007193 6.8e-21 103.6 66 77.3
Cc08_g11670 Coffea canephora HOM05D005857 ORTHO05D007193 6.8e-21 103.6 61 75.4
PSO447G0367 Papaver somniferum HOM05D005857 ORTHO05D007193 8.9e-21 103.2 67 70.1
Migut.B00707 Erythranthe guttata HOM05D005857 ORTHO05D007193 1.2e-20 102.8 68 70.6
MD08G1249300 Malus domestica HOM05D005857 ORTHO05D007193 1.5e-20 102.4 57 78.9
CSS0006636 Camellia sinensis var. sinensis HOM05D005857 ORTHO05D007193 2.0e-20 102.1 61 73.8
AUR62032483 Chenopodium quinoa HOM05D005857 ORTHO05D007193 2.0e-20 102.1 68 72.1
MD15G1444100 Malus domestica HOM05D005857 ORTHO05D007193 2.0e-20 102.1 57 78.9
Prupe.1G586500 Prunus persica HOM05D005857 ORTHO05D007193 2.0e-20 102.1 60 73.3
SalBow1G1563 Salvia bowleyana HOM05D005857 ORTHO05D007193 2.0e-20 102.1 63 69.8
Cfa004425 Carpinus fangiana HOM05D005857 ORTHO05D007193 3.4e-20 101.3 57 75.4
Haze_09965 Corylus avellana HOM05D005857 ORTHO05D007193 3.4e-20 101.3 57 75.4
Aqoxy5G01841 Aquilegia oxysepala HOM05D005857 ORTHO05D007193 5.8e-20 100.5 61 72.1
Nitab4.5_0006159g0060 Nicotiana tabacum HOM05D005857 ORTHO05D007193 5.8e-20 100.5 62 71.0
Solyc01g102830.3 Solanum lycopersicum HOM05D005857 ORTHO05D007193 7.5e-20 100.1 62 71.0
Sopen01g045230 Solanum pennellii HOM05D005857 ORTHO05D007193 7.5e-20 100.1 62 71.0
PGSC0003DMG400018258 Solanum tuberosum HOM05D005857 ORTHO05D007193 7.5e-20 100.1 62 71.0
SGA_v2.0_scaffold100G29556 Striga asiatica HOM05D001195 ORTHO05D001138 7.5e-20 100.1 65 72.3
Sed0006374 Sechium edule HOM05D005857 ORTHO05D007193 9.9e-20 99.8 61 70.5
CAN.G1379.7 Capsicum annuum HOM05D005857 ORTHO05D007193 1.3e-19 99.4 66 66.7
FAN18G0749 Fragaria x ananassa HOM05D005857 ORTHO05D007193 1.3e-19 99.4 54 81.5
Oeu010607.1 Olea europaea HOM05D005857 ORTHO05D007193 1.3e-19 99.4 72 62.5
Nitab4.5_0000521g0060 Nicotiana tabacum HOM05D005857 ORTHO05D007193 1.7e-19 99.0 62 67.7
Oeu000158.1 Olea europaea HOM05D005857 ORTHO05D007193 1.7e-19 99.0 62 69.4
DCAR_001733 Daucus carota HOM05D005857 ORTHO05D007193 2.2e-19 98.6 71 64.8
HanXRQChr11g0343801 Helianthus annuus HOM05D005857 ORTHO05D007193 2.9e-19 98.2 66 65.2
Peaxi162Scf00194g01021 Petunia axillaris HOM05D005857 ORTHO05D007193 3.7e-19 97.8 70 62.9
FAN04G0073 Fragaria x ananassa HOM05D005857 ORTHO05D007193 4.9e-19 97.4 54 79.6
SHI07423 Sapria himalayana HOM05D005857 ORTHO05D007193 4.9e-19 97.4 59 69.5
Lalb_Chr12g0195891 Lupinus albus HOM05D005857 ORTHO05D007193 8.3e-19 96.7 68 66.2
CiPaw.05G001000 Carya illinoinensis HOM05D005857 ORTHO05D007193 1.1e-18 96.3 72 61.1
TAR628G1233 Trochodendron aralioides HOM05D005857 ORTHO05D007193 1.1e-18 96.3 70 62.9
MBI03_g21081_MAGBIO Magnolia biondii HOM05D005857 ORTHO05D007193 1.9e-18 95.5 53 75.5
ATR1089G102 Amborella trichopoda HOM05D005857 ORTHO05D007193 4.1e-18 94.4 54 74.1
FAN13G1483 Fragaria x ananassa HOM05D005857 ORTHO05D007193 4.1e-18 94.4 55 74.5
Sc03g0005520 Simmondsia chinensis HOM05D005857 ORTHO05D007193 4.1e-18 94.4 64 65.6
TPR.G6546 Trifolium pratense HOM05D005857 ORTHO05D007193 5.4e-18 94.0 57 73.7
Zm00001eb244200 Zea mays HOM05D005857 ORTHO05D007193 5.4e-18 94.0 62 64.5
Lj4g0009904 Lotus japonicus HOM05D005857 ORTHO05D007193 7.1e-18 93.6 57 70.2
Glyma.17G002300 Glycine max HOM05D005857 ORTHO05D007193 9.2e-18 93.2 55 72.7
Lsat_1_v5_gn_9_83180 Lactuca sativa HOM05D005857 ORTHO05D007193 9.2e-18 93.2 66 63.6
Atru.chr6.134 Acer truncatum HOM05D005857 ORTHO05D007193 1.2e-17 92.8 71 57.7
Atru.chr6.187 Acer truncatum HOM05D005857 ORTHO05D007193 1.2e-17 92.8 71 57.7
FAN08G0400 Fragaria x ananassa HOM05D005857 ORTHO05D007193 1.2e-17 92.8 53 77.4
Os02g0564200 Oryza sativa ssp. japonica HOM05D005857 ORTHO05D007193 1.2e-17 92.8 62 62.9
MD11G1276400 Malus domestica HOM05D005857 ORTHO05D007193 1.6e-17 92.4 75 61.3
Medtr4g134550 Medicago truncatula HOM05D005857 ORTHO05D007193 2.7e-17 91.7 57 70.2
Ciclev10003044m.g Citrus clementina HOM05D005857 ORTHO05D007193 4.6e-17 90.9 60 63.3
Ciclev10003046m.g Citrus clementina HOM05D005857 ORTHO05D007193 6.0e-17 90.5 71 56.3
HanXRQChr10g0285581 Helianthus annuus HOM05D005857 ORTHO05D007193 6.0e-17 90.5 66 63.6
EL10Ac3g06399 Beta vulgaris HOM05D005857 ORTHO05D007193 7.8e-17 90.1 49 77.6
Nitab4.5_0001085g0140 Nicotiana tabacum HOM05D005857 ORTHO05D007193 1.0e-16 89.7 62 64.5
Ca_13524_v3 Cicer arietinum L. HOM05D005857 ORTHO05D007193 2.3e-16 88.6 57 71.9
Lsat_1_v5_gn_9_124880 Lactuca sativa HOM05D005857 ORTHO05D007193 3.9e-16 87.8 58 65.5
Psat0s2555g0160 Pisum sativum HOM05D005857 ORTHO05D007193 3.9e-16 87.8 57 71.9
Actinidia11730 Actinidia chinensis HOM05D005857 ORTHO05D007193 6.6e-16 87.0 46 80.4
ECA236G3879 Erigeron canadensis HOM05D005857 ORTHO05D007193 6.6e-16 87.0 73 54.8
unitig_8.g2962 Utricularia gibba HOM05D005857 ORTHO05D007193 4.3e-15 84.3 47 78.7
Phvul.003G091000 Phaseolus vulgaris HOM05D005857 ORTHO05D007193 2.8e-14 81.6 62 62.9
Nitab4.5_0008987g0050 Nicotiana tabacum HOM05D005857 ORTHO05D007193 8.1e-14 80.1 55 63.6
BolC8t49293H Brassica oleracea HOM05D005857 ORTHO05D007193 5.2e-13 77.4 37 91.9
Psat4g149960 Pisum sativum HOM05D005857 ORTHO05D007193 5.2e-13 77.4 58 63.8
Nitab4.5_0004030g0040 Nicotiana tabacum HOM05D005857 ORTHO05D007193 2.2e-11 72.0 53 60.4
Zm00001eb182520 Zea mays HOM05D005857 ORTHO05D007193 2.9e-11 71.6 58 51.7
Zm00001eb353890 Zea mays HOM05D005857 ORTHO05D007193 6.4e-11 70.5 50 60.0
Zm00001eb203220 Zea mays HOM05D005857 ORTHO05D007193 9.2e-10 66.6 51 51.0
Pp3c9_5250 Physcomitrium patens HOM05D005857 ORTHO05D007193 1.2e-09 66.2 56 51.8
GSVIVG01023132001 Vitis vinifera HOM05D005857 ORTHO05D007193 2.7e-09 65.1 30 86.7
Zm00001eb203730 Zea mays HOM05D005857 ORTHO05D007193 3.5e-09 64.7 50 50.0
BcaB08g35768 Brassica carinata HOM05D005857 ORTHO05D007193 6.0e-09 63.9 45 71.1
Pp3c15_3960 Physcomitrium patens HOM05D005857 ORTHO05D007193 3.3e-07 58.2 57 49.1
AagrBONN_evm.TU.Sc2ySwM_369.408 Anthoceros agrestis HOM05D005857 ORTHO05D007193 5.6e-07 57.4 60 45.0
Os07g0175750 Oryza sativa ssp. japonica HOM05D005857 ORTHO05D007193 9.6e-07 56.6 46 50.0
Medtr2g036340 Medicago truncatula HOM05D005857 ORTHO05D007193 1.2e-06 56.2 57 47.4
Medtr8g046930 Medicago truncatula HOM05D005857 ORTHO05D007193 1.2e-06 56.2 57 47.4
Mapoly0052s0008 Marchantia polymorpha HOM05D005857 ORTHO05D007193 6.2e-06 53.9 57 43.9


User provided reference genes

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