Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 5.1e-196 687.6 349 100.0
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 1.4e-153 546.6 345 82.9
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 3.4e-152 542.0 343 82.5
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 4.5e-152 541.6 343 81.9
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 7.2e-150 534.3 345 82.0
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 9.4e-150 533.9 345 81.7
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 9.4e-150 533.9 344 81.1
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 1.2e-149 533.5 345 80.9
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 2.7e-149 532.3 345 81.4
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 5.2e-148 528.1 343 79.6
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 2.6e-147 525.8 344 78.5
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 3.3e-147 525.4 344 78.8
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 3.3e-147 525.4 344 78.8
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 1.6e-141 506.5 351 76.9
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 2.8e-122 442.6 345 67.8
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 2.8e-122 442.6 299 80.3
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 5.4e-121 438.3 348 67.8
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 2.0e-120 436.4 349 66.2
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 7.8e-120 434.5 344 70.1
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 1.0e-119 434.1 345 69.0
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 1.3e-119 433.7 340 68.2
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 1.7e-119 433.3 348 67.2
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 2.3e-119 433.0 349 65.6
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 8.6e-119 431.0 345 67.5
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 1.1e-118 430.6 348 67.5
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 2.5e-118 429.5 348 66.1
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 6.1e-117 424.9 345 67.0
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 1.4e-116 423.7 345 66.1
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 2.3e-116 422.9 348 64.9
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 1.5e-115 420.2 350 64.6
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 5.7e-115 418.3 346 67.1
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 7.5e-115 417.9 340 65.3
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 9.8e-115 417.5 345 65.8
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 1.7e-114 416.8 342 65.5
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 3.7e-114 415.6 345 67.0
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 1.4e-113 413.7 345 66.7
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 1.8e-113 413.3 343 64.7
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 3.2e-113 412.5 346 65.0
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 7.0e-113 411.4 352 63.6
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 9.2e-113 411.0 348 63.8
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 1.6e-112 410.2 345 65.2
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 1.6e-112 410.2 345 64.1
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 2.7e-112 409.5 344 63.4
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 1.7e-111 406.8 349 62.5
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 2.3e-111 406.4 345 65.8
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 5.0e-111 405.2 346 62.7
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 5.0e-111 405.2 345 63.5
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 6.6e-111 404.8 344 63.7
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 2.5e-110 402.9 347 63.4
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 5.6e-110 401.7 346 61.8
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 7.3e-110 401.4 340 62.6
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 9.5e-110 401.0 347 61.7
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 1.2e-109 400.6 350 61.7
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 1.2e-109 400.6 348 62.6
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 1.6e-109 400.2 352 63.6
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 1.6e-109 400.2 352 63.6
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 2.8e-109 399.4 345 64.1
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 3.6e-109 399.1 343 62.4
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 1.0e-108 397.5 347 62.8
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 5.2e-108 395.2 349 61.0
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 8.9e-108 394.4 350 61.1
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 4.4e-107 392.1 343 59.8
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 1.3e-106 390.6 347 63.7
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 1.3e-106 390.6 286 71.0
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 3.7e-106 389.0 378 58.5
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.1e-105 387.5 345 64.3
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 1.9e-105 386.7 341 63.9
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 2.0e-104 383.3 388 56.7
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 3.5e-104 382.5 343 61.8
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 6.0e-104 381.7 299 69.2
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 2.3e-103 379.8 350 60.6
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 4.3e-102 375.6 269 71.7
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 5.6e-102 375.2 347 60.5
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 1.2e-101 374.0 345 59.7
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 6.2e-101 371.7 333 59.5
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 8.1e-101 371.3 378 56.3
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 1.8e-100 370.2 345 59.4
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 4.0e-100 369.0 289 66.4
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 6.8e-100 368.2 364 57.1
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 6.8e-100 368.2 352 59.7
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 2.6e-99 366.3 379 55.7
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 1.1e-97 360.9 344 60.5
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 2.1e-96 356.7 349 57.0
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 4.6e-96 355.5 282 66.0
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 6.0e-96 355.1 281 65.5
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 4.7e-93 345.5 298 64.1
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 6.8e-92 341.7 343 56.9
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 1.3e-90 337.4 285 67.4
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 2.2e-90 336.7 299 61.9
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 3.8e-90 335.9 298 61.4
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 1.4e-89 334.0 347 53.9
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 2.1e-88 330.1 281 65.5
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 2.7e-88 329.7 327 57.5
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 1.1e-84 317.8 298 58.1
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 4.4e-83 312.4 351 52.1
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 5.8e-83 312.0 281 62.6
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 3.8e-82 309.3 263 60.5
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 2.1e-77 293.5 261 55.9
Aa31sc734G30 Aethionema arabicum HOM05D002318 ORTHO05D008744 6.9e-76 288.5 202 79.7
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 1.5e-75 287.3 303 52.1
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 4.9e-74 282.3 261 54.4
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 3.2e-73 279.6 291 55.7
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 9.9e-67 258.1 229 65.5
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 3.3e-62 243.0 292 48.6
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 8.2e-61 238.4 166 75.9
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 1.2e-59 234.6 269 48.3
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 2.6e-59 233.4 222 55.4
arahy.Tifrunner.gnm1.ann1.1U2S5X Arachis hypogaea HOM05D002318 ORTHO05D008744 2.1e-56 223.8 225 61.3
arahy.Tifrunner.gnm1.ann1.TF58FW Arachis hypogaea HOM05D002318 ORTHO05D008744 6.0e-56 222.2 225 60.9
CSS0007300 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 1.1e-54 218.0 219 60.7
Glyma.01G055000 Glycine max HOM05D002318 ORTHO05D008744 1.5e-54 217.6 162 75.3
Zm00001eb370310 Zea mays HOM05D002318 ORTHO05D008744 6.1e-48 195.7 151 69.5
CSS0032009 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 4.5e-43 179.5 246 45.9
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 1.4e-39 167.9 276 38.4
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 9.1e-36 155.2 264 34.5
CBR_g50304 Chara braunii HOM05D020303 ORTHO05D021299 2.1e-16 90.9 169 34.9
Glyma.01G054950 Glycine max HOM05D002318 ORTHO05D008744 3.6e-16 90.1 82 56.1
Os01g0764500 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 2.8e-13 80.5 62 59.7
arahy.Tifrunner.gnm1.ann1.QV9UMR Arachis hypogaea HOM05D000001 ORTHO05D000003 2.9e-10 70.5 45 68.9
Lsat_1_v5_gn_5_151580 Lactuca sativa HOM05D002318 ORTHO05D008744 6.1e-08 62.8 98 41.8
CBR_g3150 Chara braunii HOM05D020303 ORTHO05D021299 7.5e-06 55.8 85 38.8
Cfa025736 Carpinus fangiana HOM05D020303 ORTHO05D021299 9.8e-06 55.5 92 33.7


User provided reference genes

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