Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G6270 Aethionema arabicum HOM05D007119 ORTHO05D009220 1.4e-270 935.6 464 100.0
AT3G26090 Arabidopsis thaliana HOM05D007119 ORTHO05D009220 2.5e-230 802.0 465 84.7
Carub.0005s0397 Capsella rubella HOM05D007119 ORTHO05D009220 7.1e-230 800.4 465 85.4
AL5G14790 Arabidopsis lyrata HOM05D007119 ORTHO05D009220 3.5e-229 798.1 465 84.5
CARHR147090 Cardamine hirsuta HOM05D007119 ORTHO05D009220 8.7e-228 793.5 466 83.9
Sp2g15290 Schrenkiella parvula HOM05D007119 ORTHO05D009220 9.7e-227 790.0 464 85.1
BcaC06g31092 Brassica carinata HOM05D007119 ORTHO05D009220 8.2e-226 786.9 466 83.5
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 4.2e-222 774.6 467 82.2
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 4.2e-222 774.6 467 82.2
BcaC06g33928 Brassica carinata HOM05D007119 ORTHO05D009220 9.4e-222 773.5 467 82.7
BcaB07g30623 Brassica carinata HOM05D007119 ORTHO05D009220 2.7e-221 771.9 466 81.3
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 1.0e-220 770.0 467 82.4
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 2.3e-220 768.8 467 82.2
C09p32210 Brassica napus HOM05D007119 ORTHO05D009220 2.2e-218 762.3 466 80.9
BcaC04g21404 Brassica carinata HOM05D007119 ORTHO05D009220 1.1e-217 760.0 466 80.7
BolC9t56067H Brassica oleracea HOM05D007119 ORTHO05D009220 1.1e-217 760.0 466 80.7
BraA09t38102Z Brassica rapa HOM05D007119 ORTHO05D009220 1.4e-217 759.6 466 80.7
THA.LOC104825682 Tarenaya hassleriana HOM05D007119 ORTHO05D009220 1.4e-217 759.6 460 78.3
A09p25150 Brassica napus HOM05D007119 ORTHO05D009220 3.4e-216 755.0 466 80.3
Thhalv10004169m.g Eutrema salsugineum HOM05D007119 ORTHO05D009220 2.1e-197 692.6 399 85.5
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 1.2e-184 650.2 451 75.8
CiPaw.05G175700 Carya illinoinensis HOM05D007119 ORTHO05D009220 1.3e-183 646.7 453 66.7
Potri.008G181500 Populus trichocarpa HOM05D007119 ORTHO05D009220 1.3e-183 646.7 451 68.5
Manes.13G018700 Manihot esculenta HOM05D007119 ORTHO05D009220 1.7e-183 646.4 460 66.1
Thecc.02G269100 Theobroma cacao HOM05D007119 ORTHO05D009220 1.5e-182 643.3 462 66.0
QL03p055873 Quercus lobata HOM05D007119 ORTHO05D009220 3.0e-180 635.6 457 65.0
TAR629G0375 Trochodendron aralioides HOM05D007119 ORTHO05D009220 5.2e-180 634.8 456 66.4
Ciclev10031444m.g Citrus clementina HOM05D007119 ORTHO05D009220 1.5e-179 633.3 458 65.1
COL.COLO4_23551 Corchorus olitorius HOM05D007119 ORTHO05D009220 7.5e-179 630.9 454 64.3
GSVIVG01010292001 Vitis vinifera HOM05D007119 ORTHO05D009220 9.8e-179 630.6 454 64.8
Dinv14769 Davidia involucrata HOM05D007119 ORTHO05D009220 1.7e-178 629.8 451 65.2
Gorai.008G162700 Gossypium raimondii HOM05D007119 ORTHO05D009220 4.9e-178 628.2 457 64.1
Gohir.D12G151200 Gossypium hirsutum HOM05D007119 ORTHO05D009220 8.3e-178 627.5 457 64.1
FvH4_4g24980 Fragaria vesca HOM05D007119 ORTHO05D009220 1.1e-177 627.1 447 66.7
arahy.Tifrunner.gnm1.ann1.3UY64B Arachis hypogaea HOM05D007119 ORTHO05D009220 1.2e-176 623.6 455 62.9
arahy.Tifrunner.gnm1.ann1.U7Q0BA Arachis hypogaea HOM05D007119 ORTHO05D009220 1.2e-176 623.6 455 62.9
CSS0010905 Camellia sinensis var. sinensis HOM05D007119 ORTHO05D009220 7.8e-176 620.9 453 64.2
TWI36G1063 Tripterygium wilfordii HOM05D007119 ORTHO05D009220 7.8e-176 620.9 457 64.1
Eucgr.H04699 Eucalyptus grandis HOM05D007119 ORTHO05D009220 2.9e-175 619.0 456 63.4
Phvul.001G257500 Phaseolus vulgaris HOM05D007119 ORTHO05D009220 2.9e-175 619.0 458 64.6
Prupe.1G238900 Prunus persica HOM05D007119 ORTHO05D009220 2.9e-175 619.0 448 66.5
RcHm_v2.0_Chr4g0432041 Rosa chinensis HOM05D007119 ORTHO05D009220 8.6e-175 617.5 447 65.8
Duzib248G1022 Durio zibethinus HOM05D007119 ORTHO05D009220 1.5e-174 616.7 455 65.1
Atru.chr11.2204 Acer truncatum HOM05D007119 ORTHO05D009220 1.9e-174 616.3 456 63.6
Glyma.18G011400 Glycine max HOM05D007119 ORTHO05D009220 3.3e-174 615.5 458 63.3
Actinidia15126 Actinidia chinensis HOM05D007119 ORTHO05D009220 5.6e-174 614.8 457 63.9
Medtr3g086170 Medicago truncatula HOM05D007119 ORTHO05D009220 9.5e-174 614.0 452 62.6
Glyma.11G245800 Glycine max HOM05D007119 ORTHO05D009220 1.2e-173 613.6 458 62.9
CANSAT01G1522 Cannabis sativa HOM05D007119 ORTHO05D009220 1.6e-173 613.2 458 65.1
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 1.5e-171 606.7 522 57.1
TPR.G14230 Trifolium pratense HOM05D007119 ORTHO05D009220 2.6e-171 605.9 467 60.8
MD13G1107500 Malus domestica HOM05D007119 ORTHO05D009220 4.4e-171 605.1 450 64.2
MD16G1107500 Malus domestica HOM05D007119 ORTHO05D009220 4.4e-171 605.1 450 64.7
CAN.G49.9 Capsicum annuum HOM05D007119 ORTHO05D009220 2.2e-170 602.8 453 63.4
Lj6g0003042 Lotus japonicus HOM05D007119 ORTHO05D009220 1.9e-169 599.7 452 64.2
Lalb_Chr23g0277791 Lupinus albus HOM05D007119 ORTHO05D009220 2.4e-169 599.4 453 62.3
Sabra08G0138500 Salix brachista HOM05D007119 ORTHO05D009220 7.0e-169 597.8 547 56.3
Hma1.2p1_0079F.1_g041390 Hydrangea macrophylla HOM05D007119 ORTHO05D009220 3.5e-168 595.5 455 63.1
Sed0010682 Sechium edule HOM05D007119 ORTHO05D009220 6.0e-168 594.7 457 62.1
TAR371G0886 Trochodendron aralioides HOM05D007119 ORTHO05D009220 6.6e-167 591.3 443 63.7
Gorai.005G173800 Gossypium raimondii HOM05D007119 ORTHO05D009220 1.5e-166 590.1 459 61.2
CsaV3_5G030670 Cucumis sativus L. HOM05D007119 ORTHO05D009220 2.5e-166 589.3 457 62.4
Gohir.A12G146600 Gossypium hirsutum HOM05D007119 ORTHO05D009220 3.3e-166 589.0 466 60.9
VMungo1383G3713 Vigna mungo HOM05D007119 ORTHO05D009220 2.1e-165 586.3 458 60.7
Lsat_1_v5_gn_8_150440 Lactuca sativa HOM05D007119 ORTHO05D009220 3.4e-163 578.9 452 60.8
Cc11_g16270 Coffea canephora HOM05D007119 ORTHO05D009220 1.3e-162 577.0 457 59.5
vmacro16153 Vaccinium macrocarpon HOM05D007119 ORTHO05D009220 1.7e-162 576.6 508 56.5
Sc14g0008910 Simmondsia chinensis HOM05D007119 ORTHO05D009220 2.9e-162 575.9 456 60.3
Gohir.A03G131100 Gossypium hirsutum HOM05D007119 ORTHO05D009220 4.9e-162 575.1 459 59.9
Migut.E00228 Erythranthe guttata HOM05D007119 ORTHO05D009220 1.2e-160 570.5 455 60.2
Nn3g16605 Nelumbo nucifera HOM05D007119 ORTHO05D009220 4.6e-160 568.5 453 58.9
DCAR_007027 Daucus carota HOM05D007119 ORTHO05D009220 1.7e-159 566.6 448 59.2
MSTRG.13331 Avicennia marina HOM05D007119 ORTHO05D009220 3.9e-159 565.5 456 59.9
Solyc05g014160.4 Solanum lycopersicum HOM05D007119 ORTHO05D009220 1.1e-158 563.9 424 63.0
HanXRQChr12g0372081 Helianthus annuus HOM05D007119 ORTHO05D009220 3.6e-157 558.9 447 58.8
FAN22G2246 Fragaria x ananassa HOM05D007119 ORTHO05D009220 4.7e-157 558.5 452 62.2
Aqoxy3G01324 Aquilegia oxysepala HOM05D007119 ORTHO05D009220 4.0e-156 555.4 451 57.2
Hund25421 Selenicereus undatus HOM05D007119 ORTHO05D009220 7.6e-155 551.2 465 57.4
PSO017G0770 Papaver somniferum HOM05D007119 ORTHO05D009220 8.4e-154 547.7 459 58.0
Ah.03g133650 Amaranthus hybridus HOM05D007119 ORTHO05D009220 1.2e-152 543.9 452 54.6
ATR0824G105 Amborella trichopoda HOM05D007119 ORTHO05D009220 1.0e-151 540.8 455 55.8
Gohir.D02G154800 Gossypium hirsutum HOM05D007119 ORTHO05D009220 1.2e-149 533.9 396 63.6
AUR62024193 Chenopodium quinoa HOM05D007119 ORTHO05D009220 1.8e-148 530.0 469 54.8
SalBow8G1200 Salvia bowleyana HOM05D007119 ORTHO05D009220 8.9e-148 527.7 434 58.8
Psat5g093400 Pisum sativum HOM05D007119 ORTHO05D009220 1.2e-147 527.3 390 63.3
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 2.4e-145 519.6 422 57.3
Lj6C818G13 Lonicera japonica HOM05D007119 ORTHO05D009220 1.2e-139 500.7 434 59.0
ClCG05G026170 Citrullus lanatus HOM05D007119 ORTHO05D009220 3.4e-139 499.2 462 55.6
Nn4g22487 Nelumbo nucifera HOM05D007119 ORTHO05D009220 3.4e-139 499.2 390 59.5
Peaxi162Scf00128g00648 Petunia axillaris HOM05D007119 ORTHO05D009220 1.3e-138 497.3 402 59.5
EL10As2g23223 Beta vulgaris HOM05D007119 ORTHO05D009220 7.1e-137 491.5 459 52.7
SGA_v2.0_scaffold87G27113 Striga asiatica HOM05D007119 ORTHO05D009220 7.1e-129 464.9 396 57.1
MELO3C011902.2 Cucumis melo HOM05D007119 ORTHO05D009220 1.8e-119 433.7 383 57.2
Nitab4.5_0002688g0040 Nicotiana tabacum HOM05D007119 ORTHO05D009220 2.8e-117 426.4 332 61.4
Oeu012665.1 Olea europaea HOM05D007119 ORTHO05D009220 3.4e-115 419.5 323 60.7
SEGI_05094 Sequoiadendron giganteum HOM05D007119 ORTHO05D009220 4.8e-109 399.1 399 46.9
Ca_16499_v3 Cicer arietinum L. HOM05D007119 ORTHO05D009220 3.1e-108 396.4 302 63.2
Sopen05g009180 Solanum pennellii HOM05D007119 ORTHO05D009220 5.3e-108 395.6 310 61.0
AUR62005541 Chenopodium quinoa HOM05D007119 ORTHO05D009220 4.1e-92 342.8 317 53.3
MBI08_g43995_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 2.4e-84 317.0 252 61.1
MBI08_g44099_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 2.4e-84 317.0 252 61.1
AagrBONN_evm.TU.Sc2ySwM_117.1226 Anthoceros agrestis HOM05D001585 ORTHO05D001677 1.7e-77 294.3 453 37.1
SMO165G0024 Selaginella moellendorffii HOM05D007119 ORTHO05D009220 3.2e-73 280.0 356 40.4
Nitab4.5_0000041g0220 Nicotiana tabacum HOM05D007119 ORTHO05D009220 3.0e-63 246.9 241 53.1
HanXRQChr08g0208021 Helianthus annuus HOM05D007119 ORTHO05D009220 3.4e-62 243.4 207 57.0
PGSC0003DMG401010743 Solanum tuberosum HOM05D007119 ORTHO05D009220 1.7e-61 241.1 183 63.4
CANSAT25G1465 Cannabis sativa HOM05D007119 ORTHO05D009220 1.3e-29 135.2 115 60.0
HanXRQChr08g0208031 Helianthus annuus HOM05D007119 ORTHO05D009220 4.0e-23 113.6 95 56.8
Nitab4.5_0002688g0050 Nicotiana tabacum HOM05D007119 ORTHO05D036862 9.0e-15 85.9 66 60.6
Nitab4.5_0000041g0230 Nicotiana tabacum HOM05D007119 ORTHO05D036862 2.6e-14 84.3 66 62.1
Peaxi162Scf00128g00647 Petunia axillaris HOM05D007119 ORTHO05D036862 6.0e-11 73.2 78 50.0


User provided reference genes

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