Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G5960 Aethionema arabicum HOM05D006540 ORTHO05D008202 3.1e-185 651.7 354 100.0
Sp2g15690 Schrenkiella parvula HOM05D006540 ORTHO05D008202 1.2e-157 560.1 354 85.6
A06p41910 Brassica napus HOM05D006540 ORTHO05D008202 6.8e-156 554.3 357 85.7
BraA06t27110Z Brassica rapa HOM05D006540 ORTHO05D008202 6.8e-156 554.3 357 85.7
AL5G15370 Arabidopsis lyrata HOM05D006540 ORTHO05D008202 8.9e-156 553.9 354 86.2
Thhalv10004491m.g Eutrema salsugineum HOM05D006540 ORTHO05D008202 2.6e-155 552.4 357 83.5
CARHR147570 Cardamine hirsuta HOM05D006540 ORTHO05D008202 7.5e-155 550.8 357 86.0
BcaC06g33900 Brassica carinata HOM05D006540 ORTHO05D008202 1.7e-154 549.7 361 83.1
C07p35560 Brassica napus HOM05D006540 ORTHO05D008202 1.6e-152 543.1 361 82.3
BolC7t44080H Brassica oleracea HOM05D006540 ORTHO05D008202 1.6e-152 543.1 361 82.3
AT3G26580 Arabidopsis thaliana HOM05D006540 ORTHO05D008202 1.0e-151 540.4 354 85.0
BcaC06g31063 Brassica carinata HOM05D006540 ORTHO05D008202 1.5e-150 536.6 356 83.4
Carub.0005s0457 Capsella rubella HOM05D006540 ORTHO05D008202 3.9e-143 511.9 355 80.3
THA.LOC104825662 Tarenaya hassleriana HOM05D006540 ORTHO05D008202 1.5e-123 446.8 354 74.0
CiPaw.05G182700 Carya illinoinensis HOM05D006540 ORTHO05D008202 2.3e-119 433.0 358 68.2
Atru.chr11.2104 Acer truncatum HOM05D006540 ORTHO05D008202 3.3e-118 429.1 359 65.7
Cpa.g.sc33.16 Carica papaya HOM05D006540 ORTHO05D008202 3.7e-117 425.6 358 68.4
ClCG05G025710 Citrullus lanatus HOM05D006540 ORTHO05D008202 2.0e-115 419.9 359 65.5
Ciclev10032003m.g Citrus clementina HOM05D006540 ORTHO05D008202 2.6e-115 419.5 360 66.7
Duzib268G1404 Durio zibethinus HOM05D006540 ORTHO05D008202 4.5e-115 418.7 361 68.1
PGR102G2745 Punica granatum HOM05D006540 ORTHO05D008202 1.4e-113 413.7 361 67.9
Migut.K00595 Erythranthe guttata HOM05D006540 ORTHO05D008202 2.4e-113 412.9 361 62.0
Eucgr.B03288 Eucalyptus grandis HOM05D006540 ORTHO05D008202 3.0e-111 406.0 358 65.9
MD16G1102400 Malus domestica HOM05D006540 ORTHO05D008202 3.9e-111 405.6 363 63.4
Cfa009208 Carpinus fangiana HOM05D006540 ORTHO05D008202 8.7e-111 404.4 360 63.3
SalBow2G2200 Salvia bowleyana HOM05D006540 ORTHO05D008202 5.6e-110 401.7 366 60.7
MD13G1101900 Malus domestica HOM05D006540 ORTHO05D008202 1.3e-109 400.6 363 63.6
Prupe.1G243900 Prunus persica HOM05D006540 ORTHO05D008202 3.7e-109 399.1 363 62.3
MSTRG.568 Avicennia marina HOM05D006540 ORTHO05D008202 5.3e-108 395.2 363 60.9
Gohir.D01G150500 Gossypium hirsutum HOM05D006540 ORTHO05D008202 1.5e-107 393.7 365 63.8
Gorai.002G186600 Gossypium raimondii HOM05D006540 ORTHO05D008202 2.6e-107 392.9 365 63.8
RcHm_v2.0_Chr4g0432921 Rosa chinensis HOM05D006540 ORTHO05D008202 3.4e-107 392.5 362 63.0
Phvul.003G064400 Phaseolus vulgaris HOM05D006540 ORTHO05D008202 1.7e-106 390.2 354 61.3
Dinv24788 Davidia involucrata HOM05D006540 ORTHO05D008202 7.1e-105 384.8 358 65.4
Manes.13G024900 Manihot esculenta HOM05D006540 ORTHO05D008202 7.1e-105 384.8 356 62.6
Oeu059907.1 Olea europaea HOM05D006540 ORTHO05D008202 2.3e-103 379.8 368 58.7
Hma1.2p1_0223F.1_g093990 Hydrangea macrophylla HOM05D006540 ORTHO05D008202 1.1e-102 377.5 384 59.1
Duzib248G0112 Durio zibethinus HOM05D006540 ORTHO05D008202 5.7e-102 375.2 361 63.2
Actinidia37429 Actinidia chinensis HOM05D006540 ORTHO05D008202 7.4e-102 374.8 358 62.8
TAR622G1382 Trochodendron aralioides HOM05D006540 ORTHO05D008202 7.4e-102 374.8 358 60.6
vmacro16198 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 1.3e-101 374.0 360 58.9
Lj4g0023216 Lotus japonicus HOM05D006540 ORTHO05D008202 1.6e-101 373.6 361 60.4
FAN22G2305 Fragaria x ananassa HOM05D006540 ORTHO05D008202 2.2e-101 373.2 364 58.0
Glyma.17G134500 Glycine max HOM05D006540 ORTHO05D008202 3.7e-101 372.5 358 62.0
FAN17G1845 Fragaria x ananassa HOM05D006540 ORTHO05D008202 4.8e-101 372.1 364 57.7
FAN07G1259 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.1e-100 370.9 364 57.7
Thecc.02G259400 Theobroma cacao HOM05D006540 ORTHO05D008202 1.1e-100 370.9 355 63.4
arahy.Tifrunner.gnm1.ann1.LD9JWE Arachis hypogaea HOM05D006540 ORTHO05D008202 1.8e-100 370.2 366 61.7
FvH4_4g25530 Fragaria vesca HOM05D006540 ORTHO05D008202 1.8e-100 370.2 364 57.4
FAN12G0822 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.8e-100 370.2 364 57.4
arahy.Tifrunner.gnm1.ann1.NX3C69 Arachis hypogaea HOM05D006540 ORTHO05D008202 4.1e-100 369.0 366 61.5
Lj6A811T79 Lonicera japonica HOM05D006540 ORTHO05D008202 2.0e-99 366.7 365 58.1
QL03p058139 Quercus lobata HOM05D006540 ORTHO05D008202 3.4e-99 365.9 414 54.8
TWI18G0987 Tripterygium wilfordii HOM05D006540 ORTHO05D008202 5.9e-99 365.2 362 59.4
CANSAT35G0572 Cannabis sativa HOM05D006540 ORTHO05D008202 7.6e-99 364.8 360 62.5
Cc11_g15700 Coffea canephora HOM05D006540 ORTHO05D008202 5.0e-98 362.1 370 59.7
COL.COLO4_24263 Corchorus olitorius HOM05D006540 ORTHO05D008202 6.5e-98 361.7 355 56.9
Gohir.A01G159600 Gossypium hirsutum HOM05D006540 ORTHO05D008202 4.2e-97 359.0 357 61.1
PGSC0003DMG400018605 Solanum tuberosum HOM05D006540 ORTHO05D008202 3.6e-96 355.9 367 61.0
Haze_12245 Corylus avellana HOM05D006540 ORTHO05D008202 7.9e-96 354.8 379 56.5
Rhsim12G0110600 Rhododendron simsii HOM05D006540 ORTHO05D008202 7.9e-96 354.8 362 59.9
DCAR_024432 Daucus carota HOM05D006540 ORTHO05D008202 2.8e-93 346.3 341 59.8
Actinidia15092 Actinidia chinensis HOM05D006540 ORTHO05D008202 4.8e-93 345.5 358 60.1
Sc04g0009450 Simmondsia chinensis HOM05D006540 ORTHO05D008202 1.1e-92 344.4 357 58.5
EL10Ac6g13801 Beta vulgaris HOM05D006540 ORTHO05D008202 4.1e-92 342.4 364 55.8
Psat4g116680 Pisum sativum HOM05D006540 ORTHO05D008202 1.2e-91 340.9 359 57.9
Ca_22583_v3 Cicer arietinum L. HOM05D006540 ORTHO05D008202 1.0e-90 337.8 237 73.8
CSS0000303 Camellia sinensis var. sinensis HOM05D006540 ORTHO05D008202 1.7e-90 337.0 366 58.5
CDE09G1037 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 2.2e-90 336.7 358 54.5
Nitab4.5_0000007g0060 Nicotiana tabacum HOM05D006540 ORTHO05D008202 3.8e-90 335.9 368 56.0
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 5.0e-90 335.5 320 60.0
Peaxi162Scf00128g00138 Petunia axillaris HOM05D006540 ORTHO05D008202 6.5e-90 335.1 368 56.8
Lsat_1_v5_gn_8_152220 Lactuca sativa HOM05D006540 ORTHO05D008202 1.1e-89 334.3 367 58.0
BcaB01g00564 Brassica carinata HOM05D006540 ORTHO05D008202 3.2e-89 332.8 290 66.9
CDE02G2769 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 5.5e-89 332.0 356 55.3
Medtr8g069450 Medicago truncatula HOM05D006540 ORTHO05D008202 5.5e-89 332.0 357 56.0
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 9.4e-89 331.3 320 58.8
Aqoxy3G01202 Aquilegia oxysepala HOM05D006540 ORTHO05D008202 4.7e-88 328.9 362 55.0
AUR62024282 Chenopodium quinoa HOM05D006540 ORTHO05D008202 1.0e-87 327.8 360 57.2
ECA233G5619 Erigeron canadensis HOM05D006540 ORTHO05D008202 1.8e-87 327.0 285 63.9
Nitab4.5_0003628g0010 Nicotiana tabacum HOM05D006540 ORTHO05D008202 3.0e-87 326.2 368 54.9
PSO017G4849 Papaver somniferum HOM05D006540 ORTHO05D008202 5.1e-87 325.5 380 52.4
vmacro01127 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 2.0e-86 323.6 363 54.0
ATR0686G190 Amborella trichopoda HOM05D006540 ORTHO05D008202 5.7e-86 322.0 331 57.1
Ah.03g133040 Amaranthus hybridus HOM05D006540 ORTHO05D008202 1.3e-85 320.9 366 56.3
Sopen05g008320 Solanum pennellii HOM05D006540 ORTHO05D008202 2.8e-85 319.7 366 54.6
HanXRQChr08g0208131 Helianthus annuus HOM05D006540 ORTHO05D008202 4.8e-85 318.9 368 55.4
GSVIVG01004073001 Vitis vinifera HOM05D006540 ORTHO05D008202 8.2e-85 318.2 196 77.6
Lalb_Chr05g0228421 Lupinus albus HOM05D006540 ORTHO05D008202 1.1e-84 317.8 357 52.9
CAN.G832.5 Capsicum annuum HOM05D006540 ORTHO05D008202 7.0e-84 315.1 368 55.2
unitig_21.g20872 Utricularia gibba HOM05D006540 ORTHO05D008202 7.0e-84 315.1 364 52.2
Nn4g22628 Nelumbo nucifera HOM05D006540 ORTHO05D008202 2.0e-83 313.5 193 79.8
AUR62005459 Chenopodium quinoa HOM05D006540 ORTHO05D008202 1.1e-81 307.8 361 55.1
PSO478G4529 Papaver somniferum HOM05D006540 ORTHO05D008202 3.6e-80 302.8 366 52.2
VMungo0251G1250 Vigna mungo HOM05D006540 ORTHO05D008202 1.5e-78 297.4 290 61.0
Rhsim12G0041000 Rhododendron simsii HOM05D006540 ORTHO05D008202 7.4e-78 295.0 437 46.5
MELO3C011955.2 Cucumis melo HOM05D006540 ORTHO05D008202 5.5e-73 278.9 289 60.2
CsaV3_5G031170 Cucumis sativus L. HOM05D006540 ORTHO05D008202 1.6e-72 277.3 289 59.9
MBI10_g13027_MAGBIO Magnolia biondii HOM05D006540 ORTHO05D008202 5.2e-71 272.3 391 49.6
TPR.G17765 Trifolium pratense HOM05D006540 ORTHO05D008202 1.4e-68 264.2 328 51.5
HPP92_002022 Vanilla planifolia HOM05D006540 ORTHO05D008202 5.3e-68 262.3 247 57.9
Sed0005489 Sechium edule HOM05D006540 ORTHO05D008202 3.5e-67 259.6 289 57.4
TAR374G0845 Trochodendron aralioides HOM05D006540 ORTHO05D008202 8.8e-63 245.0 285 58.9
Os03g0428800 Oryza sativa ssp. japonica HOM05D006540 ORTHO05D008202 4.5e-59 232.6 202 61.4
Zm00001eb096140 Zea mays HOM05D006540 ORTHO05D008202 2.3e-55 220.3 240 55.0
AagrBONN_evm.TU.Sc2ySwM_340.367 Anthoceros agrestis HOM05D006540 ORTHO05D008202 4.3e-49 199.5 243 44.4
Mapoly0037s0067 Marchantia polymorpha HOM05D006540 ORTHO05D008202 9.5e-49 198.4 241 47.7
SMO347G0417 Selaginella moellendorffii HOM05D006540 ORTHO05D008202 6.8e-47 192.2 237 44.7
SEGI_37038 Sequoiadendron giganteum HOM05D006540 ORTHO05D008202 3.4e-46 189.9 173 52.0
Pp3c27_6670 Physcomitrium patens HOM05D006540 ORTHO05D008202 6.0e-43 179.1 193 45.1
BcaC06g33898 Brassica carinata HOM05D006540 ORTHO05D008202 1.3e-34 151.4 82 85.4
Cre12.g528050 Chlamydomonas reinhardtii HOM05D006540 ORTHO05D008202 4.9e-21 106.3 150 40.0
CBR_g8379 Chara braunii HOM05D006540 ORTHO05D008202 6.0e-19 99.4 138 38.4
MCO07G599 Micromonas commoda HOM05D006540 ORTHO05D008202 7.3e-17 92.4 192 32.3
RcHm_v2.0_Chr5g0067811 Rosa chinensis HOM05D006540 ORTHO05D008202 7.3e-17 92.4 61 77.0
Oeu029879.1 Olea europaea HOM05D006540 ORTHO05D008202 2.6e-14 84.0 72 54.2
QL04p066147 Quercus lobata HOM05D006540 ORTHO05D008202 3.4e-14 83.6 52 82.7
PRCOL_00004949 Prasinoderma coloniale HOM05D006540 ORTHO05D008202 1.3e-13 81.6 211 29.9
unitig_744.g24293 Utricularia gibba HOM05D006540 ORTHO05D008202 6.6e-10 69.3 44 68.2
TAR625G0150 Trochodendron aralioides HOM05D006540 ORTHO05D008202 3.4e-06 57.0 84 45.2


User provided reference genes

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