Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G590 Aethionema arabicum HOM05D006075 ORTHO05D007527 3.6e-280 967.6 492 100.0
Thhalv10023435m.g Eutrema salsugineum HOM05D006075 ORTHO05D007527 1.8e-231 805.8 493 84.0
AL2G12410 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 3.4e-230 801.6 492 83.5
Sp2g01480 Schrenkiella parvula HOM05D006075 ORTHO05D007527 1.3e-229 799.7 493 83.8
AT1G63110 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 1.7e-229 799.3 494 83.4
Carub.0002s0185 Capsella rubella HOM05D006075 ORTHO05D007527 3.2e-228 795.0 487 84.2
BcaB07g31383 Brassica carinata HOM05D006075 ORTHO05D007527 5.6e-225 784.3 490 81.2
THA.LOC104818186 Tarenaya hassleriana HOM05D006075 ORTHO05D007527 4.8e-224 781.2 494 80.8
BcaC04g22472 Brassica carinata HOM05D006075 ORTHO05D007527 1.8e-223 779.2 491 81.3
A09p15680 Brassica napus HOM05D006075 ORTHO05D007527 2.0e-222 775.8 493 81.5
BraA09t37209Z Brassica rapa HOM05D006075 ORTHO05D007527 2.0e-222 775.8 493 81.5
C09p18910 Brassica napus HOM05D006075 ORTHO05D007527 1.1e-220 770.0 493 80.9
BolC9t54793H Brassica oleracea HOM05D006075 ORTHO05D007527 8.4e-213 743.8 496 79.2
AT1G12730 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 9.7e-193 677.2 484 71.1
Carub.0001s1243 Capsella rubella HOM05D006075 ORTHO05D007527 2.1e-187 659.4 487 69.6
CiPaw.11G140500 Carya illinoinensis HOM05D006075 ORTHO05D007527 3.6e-179 632.1 494 66.6
TPR.G19222 Trifolium pratense HOM05D006075 ORTHO05D007527 2.6e-177 625.9 496 66.1
QL12p017421 Quercus lobata HOM05D006075 ORTHO05D007527 3.3e-177 625.5 481 66.1
Atru.chr9.1549 Acer truncatum HOM05D006075 ORTHO05D007527 8.2e-176 620.9 474 67.3
Lj4g0025720 Lotus japonicus HOM05D006075 ORTHO05D007527 1.1e-175 620.5 495 64.6
Thecc.02G127300 Theobroma cacao HOM05D006075 ORTHO05D007527 1.1e-175 620.5 483 67.3
Nn6g34229 Nelumbo nucifera HOM05D006075 ORTHO05D007527 7.0e-175 617.8 489 64.8
Phvul.003G211900 Phaseolus vulgaris HOM05D006075 ORTHO05D007527 7.0e-175 617.8 492 65.2
Manes.01G066100 Manihot esculenta HOM05D006075 ORTHO05D007527 9.1e-175 617.5 475 67.8
GSVIVG01019817001 Vitis vinifera HOM05D006075 ORTHO05D007527 1.2e-174 617.1 477 66.9
Medtr4g102820 Medicago truncatula HOM05D006075 ORTHO05D007527 1.6e-174 616.7 494 65.8
CANSAT21G0515 Cannabis sativa HOM05D006075 ORTHO05D007527 7.7e-174 614.4 486 66.3
Glyma.17G131000 Glycine max HOM05D006075 ORTHO05D007527 1.0e-173 614.0 491 65.8
Eucgr.E00536 Eucalyptus grandis HOM05D006075 ORTHO05D007527 3.8e-173 612.1 480 65.4
Psat4g067760 Pisum sativum HOM05D006075 ORTHO05D007527 3.8e-173 612.1 492 64.6
Potri.001G109200 Populus trichocarpa HOM05D006075 ORTHO05D007527 6.5e-173 611.3 479 66.0
Dinv37681 Davidia involucrata HOM05D006075 ORTHO05D007527 1.5e-172 610.1 473 67.2
Lalb_Chr16g0389751 Lupinus albus HOM05D006075 ORTHO05D007527 1.9e-172 609.8 484 66.1
TPR.G23260 Trifolium pratense HOM05D006075 ORTHO05D007527 1.9e-172 609.8 492 64.6
Lalb_Chr09g0333281 Lupinus albus HOM05D006075 ORTHO05D007527 3.2e-172 609.0 487 65.1
TWI81G0173 Tripterygium wilfordii HOM05D006075 ORTHO05D007527 4.2e-172 608.6 477 65.4
Prupe.5G091900 Prunus persica HOM05D006075 ORTHO05D007527 5.5e-172 608.2 483 66.7
CSS0042428 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 9.4e-172 607.4 465 66.5
Psat1g082240 Pisum sativum HOM05D006075 ORTHO05D007527 9.4e-172 607.4 493 64.1
Ciclev10019953m.g Citrus clementina HOM05D006075 ORTHO05D007527 2.1e-171 606.3 482 64.7
Migut.E01290 Erythranthe guttata HOM05D006075 ORTHO05D007527 2.1e-171 606.3 471 66.2
Rhsim07G0094000 Rhododendron simsii HOM05D006075 ORTHO05D007527 2.1e-171 606.3 496 62.5
MSTRG.13821 Avicennia marina HOM05D006075 ORTHO05D007527 8.0e-171 604.4 472 64.2
Oeu011664.1 Olea europaea HOM05D006075 ORTHO05D007527 1.8e-170 603.2 482 64.3
Gorai.002G011900 Gossypium raimondii HOM05D006075 ORTHO05D007527 4.0e-170 602.1 483 65.6
Gohir.D01G009800 Gossypium hirsutum HOM05D006075 ORTHO05D007527 5.2e-170 601.7 487 65.1
AL1G24320 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 6.7e-170 601.3 486 66.5
Cc08_g14070 Coffea canephora HOM05D006075 ORTHO05D007527 8.8e-170 600.9 470 66.8
Gohir.A01G010200 Gossypium hirsutum HOM05D006075 ORTHO05D007527 8.8e-170 600.9 483 65.4
FAN18G0544 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.2e-169 600.5 486 65.8
MD06G1073700 Malus domestica HOM05D006075 ORTHO05D007527 2.0e-169 599.7 480 64.4
FAN08G0877 Fragaria x ananassa HOM05D006075 ORTHO05D007527 3.3e-169 599.0 486 65.6
RcHm_v2.0_Chr7g0199111 Rosa chinensis HOM05D006075 ORTHO05D007527 3.3e-169 599.0 491 65.8
Sed0007766 Sechium edule HOM05D006075 ORTHO05D007527 3.3e-169 599.0 480 64.8
CAN.G981.23 Capsicum annuum HOM05D006075 ORTHO05D007527 2.8e-168 595.9 471 64.8
Sopen08g028750 Solanum pennellii HOM05D006075 ORTHO05D007527 6.3e-168 594.7 483 63.1
FAN04G1557 Fragaria x ananassa HOM05D006075 ORTHO05D007527 8.3e-168 594.3 490 64.7
Solyc08g080420.4 Solanum lycopersicum HOM05D006075 ORTHO05D007527 3.1e-167 592.4 471 63.9
PSO478G2556 Papaver somniferum HOM05D006075 ORTHO05D007527 5.3e-167 591.7 493 61.9
Lj2A193G48 Lonicera japonica HOM05D006075 ORTHO05D007527 1.2e-166 590.5 463 66.7
MELO3C005634.2 Cucumis melo HOM05D006075 ORTHO05D007527 1.6e-166 590.1 480 63.8
PSO782G2103 Papaver somniferum HOM05D006075 ORTHO05D007527 2.0e-166 589.7 493 61.5
HanXRQChr03g0085661 Helianthus annuus HOM05D006075 ORTHO05D007527 2.7e-166 589.3 478 65.7
arahy.Tifrunner.gnm1.ann1.M2EVQD Arachis hypogaea HOM05D006075 ORTHO05D007527 3.5e-166 589.0 496 61.9
ECA240G3011 Erigeron canadensis HOM05D006075 ORTHO05D007527 5.9e-166 588.2 483 64.2
Sabra01G0082500 Salix brachista HOM05D006075 ORTHO05D007527 7.7e-166 587.8 517 60.7
PGR042G3166 Punica granatum HOM05D006075 ORTHO05D007527 4.7e-163 578.6 494 62.1
CsaV3_5G003210 Cucumis sativus L. HOM05D006075 ORTHO05D007527 2.3e-162 576.2 480 62.5
MD04G1066500 Malus domestica HOM05D006075 ORTHO05D007527 4.1e-159 565.5 456 65.8
arahy.Tifrunner.gnm1.ann1.S8HR28 Arachis hypogaea HOM05D006075 ORTHO05D007527 2.3e-157 559.7 496 60.3
Os02g0688900 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 1.1e-156 557.4 471 61.1
HPP92_001310 Vanilla planifolia HOM05D006075 ORTHO05D007527 1.9e-156 556.6 469 60.6
VMungo1215G1399 Vigna mungo HOM05D006075 ORTHO05D007527 1.4e-154 550.4 446 65.5
SalBow1G6580 Salvia bowleyana HOM05D006075 ORTHO05D007527 1.8e-154 550.1 574 53.7
SGA_v2.0_scaffold385G50455 Striga asiatica HOM05D006075 ORTHO05D007527 3.7e-152 542.3 472 61.2
FvH4_5g01570 Fragaria vesca HOM05D006075 ORTHO05D007527 1.2e-150 537.3 435 65.5
EL10Ac5g12736 Beta vulgaris HOM05D006075 ORTHO05D007527 1.0e-149 534.3 461 61.2
Actinidia05225 Actinidia chinensis HOM05D006075 ORTHO05D007527 1.1e-148 530.8 480 59.2
Lsat_1_v5_gn_6_87521 Lactuca sativa HOM05D006075 ORTHO05D007527 1.5e-148 530.4 460 62.4
Peaxi162Scf00714g00528 Petunia axillaris HOM05D006075 ORTHO05D007527 4.4e-145 518.8 554 52.5
CDE11G0531 Ceratophyllum demersum HOM05D006075 ORTHO05D007527 4.9e-144 515.4 471 56.7
SEGI_27555 Sequoiadendron giganteum HOM05D006075 ORTHO05D007527 8.3e-144 514.6 491 54.4
CARHR013020 Cardamine hirsuta HOM05D006075 ORTHO05D007527 2.4e-143 513.1 386 68.9
CARHR048400 Cardamine hirsuta HOM05D006075 ORTHO05D007527 3.2e-143 512.7 337 78.0
TAR629G3145 Trochodendron aralioides HOM05D006075 ORTHO05D007527 1.4e-135 487.3 395 63.8
vmacro13924 Vaccinium macrocarpon HOM05D006075 ORTHO05D007527 2.7e-134 483.0 479 54.9
HanXRQChr11g0323321 Helianthus annuus HOM05D006075 ORTHO05D007527 6.0e-134 481.9 479 57.4
ClCG01G003090 Citrullus lanatus HOM05D006075 ORTHO05D007527 2.5e-132 476.5 486 55.1
FAN08G0114 Fragaria x ananassa HOM05D006075 ORTHO05D007527 3.1e-130 469.5 428 61.2
FAN13G2280 Fragaria x ananassa HOM05D006075 ORTHO05D007527 2.9e-128 463.0 410 61.5
COL.COLO4_32412 Corchorus olitorius HOM05D006075 ORTHO05D007527 2.7e-126 456.4 504 53.6
unitig_744.g24646 Utricularia gibba HOM05D006075 ORTHO05D007527 1.0e-125 454.5 489 51.9
Duzib052G1148 Durio zibethinus HOM05D006075 ORTHO05D007527 1.1e-124 451.1 481 53.4
Manes.02G026900 Manihot esculenta HOM05D006075 ORTHO05D007527 1.5e-124 450.7 518 52.5
TAR629G0535 Trochodendron aralioides HOM05D006075 ORTHO05D007527 6.8e-122 441.8 364 63.5
Nitab4.5_0002853g0070 Nicotiana tabacum HOM05D006075 ORTHO05D007527 1.2e-121 441.0 512 50.4
Nitab4.5_0016932g0010 Nicotiana tabacum HOM05D006075 ORTHO05D007527 3.5e-118 429.5 476 51.3
PSO478G1113 Papaver somniferum HOM05D006075 ORTHO05D007527 5.1e-117 425.6 342 64.6
Sc01g0008740 Simmondsia chinensis HOM05D006075 ORTHO05D007527 2.8e-115 419.9 385 59.2
PGSC0003DMG400003033 Solanum tuberosum HOM05D006075 ORTHO05D007527 3.2e-111 406.4 468 49.8
ATR0322G053 Amborella trichopoda HOM05D006075 ORTHO05D007527 3.0e-109 399.8 349 59.6
Mapoly0001s0316 Marchantia polymorpha HOM05D006075 ORTHO05D007527 3.6e-107 392.9 485 46.8
Pp3c9_23740 Physcomitrium patens HOM05D006075 ORTHO05D007527 8.1e-107 391.7 505 45.7
Glyma.05G049100 Glycine max HOM05D006075 ORTHO05D007527 1.8e-106 390.6 364 59.6
Ah.12g057560 Amaranthus hybridus HOM05D006075 ORTHO05D007527 9.6e-100 368.2 464 47.8
Haze_08940 Corylus avellana HOM05D006075 ORTHO05D007527 1.0e-96 358.2 300 63.3
SMO270G0127 Selaginella moellendorffii HOM05D006075 ORTHO05D007527 2.3e-93 347.1 522 41.2
Hund14727 Selenicereus undatus HOM05D006075 ORTHO05D007527 3.3e-92 343.2 488 45.5
Sed0016840 Sechium edule HOM05D006075 ORTHO05D007527 9.0e-90 335.1 287 61.0
Zm00001eb251050 Zea mays HOM05D006075 ORTHO05D007527 2.0e-89 334.0 328 53.7
Cpa.g.sc74.79 Carica papaya HOM05D006075 ORTHO05D007527 1.5e-84 317.8 300 57.0
AagrBONN_evm.TU.Sc2ySwM_117.1004 Anthoceros agrestis HOM05D006075 ORTHO05D007527 5.1e-77 292.7 392 45.2
Dinv39003 Davidia involucrata HOM05D006075 ORTHO05D007527 6.1e-70 269.2 308 51.6
CBR_g17923 Chara braunii HOM05D006075 ORTHO05D007527 4.7e-62 243.0 758 27.8
Os01g0870201 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 2.3e-61 240.7 475 35.4
Ca_20251_v3 Cicer arietinum L. HOM05D006075 ORTHO05D007527 4.7e-54 216.5 160 65.0
CSS0009197 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 1.7e-51 208.0 442 35.7
AUR62017286 Chenopodium quinoa HOM05D006075 ORTHO05D007527 9.8e-44 182.2 175 61.7
TAR636G1294 Trochodendron aralioides HOM05D006075 ORTHO05D007527 2.3e-40 171.0 157 56.7
C09p15950 Brassica napus HOM05D006075 ORTHO05D007527 1.2e-38 165.2 99 80.8
MCO15G123 Micromonas commoda HOM05D006075 ORTHO05D007527 2.0e-36 157.9 471 28.9
BolC9t54506H Brassica oleracea HOM05D006075 ORTHO05D007527 7.8e-33 146.0 116 68.1
AUR62010644 Chenopodium quinoa HOM05D006075 ORTHO05D007527 3.9e-32 143.7 175 49.1
ATR0322G060 Amborella trichopoda HOM05D006075 ORTHO05D007527 2.7e-25 120.9 94 64.9
Eucgr.H02816 Eucalyptus grandis HOM05D005128 ORTHO05D006227 4.6e-25 120.2 76 71.1
TAR636G2798 Trochodendron aralioides HOM05D006075 ORTHO05D007527 1.0e-24 119.0 67 80.6
PRCOL_00005762 Prasinoderma coloniale HOM05D006075 ORTHO05D007527 6.2e-22 109.8 545 25.1
Cre03.g150400 Chlamydomonas reinhardtii HOM05D006075 ORTHO05D007527 1.1e-13 82.4 629 23.4
Actinidia27405 Actinidia chinensis HOM05D006075 ORTHO05D007527 8.4e-11 72.8 64 59.4
Pp3c15_22645 Physcomitrium patens HOM05D006075 ORTHO05D007527 2.7e-09 67.8 114 42.1
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 1.9e-07 61.6 44 63.6


User provided reference genes

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