Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 8.2e-149 530.4 275 100.0
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 2.2e-114 416.0 274 82.5
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 3.8e-114 415.2 271 80.8
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 1.5e-113 413.3 272 80.1
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 3.2e-113 412.1 267 78.7
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 4.2e-113 411.8 272 80.5
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 2.7e-112 409.1 274 80.3
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 2.7e-112 409.1 273 81.0
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 6.1e-112 407.9 273 80.6
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 6.1e-112 407.9 273 80.6
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 8.0e-112 407.5 272 82.0
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 8.0e-112 407.5 275 81.1
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 1.0e-111 407.1 272 79.8
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 3.0e-111 405.6 272 81.2
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 8.8e-111 404.1 270 80.7
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 2.2e-109 399.4 270 78.1
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 3.7e-109 398.7 271 79.7
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 1.0e-90 337.4 233 79.0
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 1.1e-89 334.0 275 66.2
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 5.6e-89 331.6 269 67.7
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 1.6e-88 330.1 270 67.4
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 4.7e-88 328.6 268 67.2
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 8.1e-88 327.8 276 66.7
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 1.4e-87 327.0 277 66.1
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 2.3e-87 326.2 273 65.9
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 3.1e-87 325.9 269 66.9
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 4.0e-87 325.5 236 72.5
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 5.2e-87 325.1 245 71.0
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 8.9e-87 324.3 220 75.5
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 2.0e-86 323.2 231 72.7
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 4.4e-86 322.0 273 65.6
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 7.5e-86 321.2 213 77.5
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 9.8e-86 320.9 286 63.3
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 2.2e-85 319.7 273 63.0
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 2.9e-85 319.3 228 75.0
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 2.9e-85 319.3 268 64.9
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 8.3e-85 317.8 274 64.2
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 8.3e-85 317.8 225 74.2
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 1.1e-84 317.4 277 63.2
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 2.4e-84 316.2 275 62.9
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 2.4e-84 316.2 234 71.8
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 2.4e-84 316.2 228 74.1
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 3.2e-84 315.8 197 80.2
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 3.2e-84 315.8 202 79.2
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 3.2e-84 315.8 218 73.4
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 3.2e-84 315.8 218 73.4
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 3.2e-84 315.8 245 69.4
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 3.2e-84 315.8 226 73.9
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 4.1e-84 315.5 197 82.2
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 4.1e-84 315.5 276 65.6
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 9.2e-84 314.3 197 81.7
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 9.2e-84 314.3 193 82.4
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 9.2e-84 314.3 274 63.5
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 9.2e-84 314.3 218 72.9
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 9.2e-84 314.3 198 80.3
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 9.2e-84 314.3 246 69.5
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 1.2e-83 313.9 245 69.0
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 1.2e-83 313.9 270 64.8
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 1.6e-83 313.5 276 64.9
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 1.6e-83 313.5 197 80.2
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 1.6e-83 313.5 213 76.1
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 2.1e-83 313.2 274 65.0
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 2.7e-83 312.8 198 80.8
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 2.7e-83 312.8 270 66.3
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 3.5e-83 312.4 199 81.9
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 6.0e-83 311.6 274 63.1
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 6.0e-83 311.6 267 62.9
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 7.8e-83 311.2 270 63.7
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 1.0e-82 310.8 209 77.5
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 1.3e-82 310.5 255 66.3
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 2.3e-82 309.7 217 74.7
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 2.3e-82 309.7 269 66.2
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 3.0e-82 309.3 273 64.1
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 3.0e-82 309.3 271 66.1
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 3.0e-82 309.3 214 77.1
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 5.1e-82 308.5 230 70.4
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 6.6e-82 308.1 239 67.8
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 8.6e-82 307.8 189 82.5
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 1.1e-81 307.4 188 81.9
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 1.1e-81 307.4 271 65.7
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 1.5e-81 307.0 198 79.8
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 2.5e-81 306.2 201 77.6
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 2.5e-81 306.2 267 61.8
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 3.3e-81 305.8 272 64.3
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 4.3e-81 305.4 202 77.7
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 1.2e-80 303.9 192 80.7
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 2.8e-80 302.8 202 78.2
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 4.7e-80 302.0 187 82.4
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 4.7e-80 302.0 195 79.0
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 1.1e-79 300.8 188 80.9
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 1.8e-79 300.1 203 77.3
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 8.9e-79 297.7 189 80.4
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 3.4e-78 295.8 187 80.7
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 5.8e-78 295.0 201 76.6
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 1.3e-77 293.9 194 79.9
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 1.7e-77 293.5 186 79.0
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 2.9e-77 292.7 191 78.0
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 1.1e-76 290.8 186 79.0
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 6.0e-75 285.0 196 75.5
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 1.4e-71 273.9 194 69.6
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 5.2e-71 271.9 267 59.2
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 2.7e-67 259.6 269 57.6
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 6.0e-67 258.5 204 70.1
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 8.1e-64 248.1 188 65.4
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 5.3e-63 245.4 191 63.9
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 5.1e-58 228.8 196 58.2
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 2.8e-56 223.0 213 60.1
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 3.4e-54 216.1 136 81.6
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 9.9e-54 214.5 206 58.7
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 1.4e-52 210.7 269 48.3
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 5.3e-47 192.2 197 51.8
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 4.2e-44 182.6 137 70.8
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 4.2e-44 182.6 109 81.7
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 7.9e-43 178.3 181 55.2
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 2.3e-42 176.8 184 50.5
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 1.3e-37 161.0 109 67.9
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 1.3e-34 151.0 189 43.4
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.2e-29 133.7 142 54.2
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 6.9e-23 112.1 81 69.1
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 1.3e-21 107.8 72 80.6
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 1.0e-18 98.2 174 43.7
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 7.7e-14 82.0 47 83.0
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 3.8e-13 79.7 46 87.0
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 8.5e-13 78.6 146 41.8
BcaB01g05146 Brassica carinata HOM05D039718 ORTHO05D031954 7.0e-07 58.9 104 39.4
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 2.7e-06 57.0 44 59.1


User provided reference genes

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