Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G5770 Aethionema arabicum HOM05D005312 ORTHO05D006459 8.1e-225 783.5 417 100.0
Carub.0005s0483 Capsella rubella HOM05D005312 ORTHO05D006459 7.7e-175 617.5 389 81.2
Thhalv10004350m.g Eutrema salsugineum HOM05D005312 ORTHO05D006459 2.1e-172 609.4 424 79.0
AL5G15650 Arabidopsis lyrata HOM05D005312 ORTHO05D006459 4.7e-172 608.2 420 77.9
C02p53340 Brassica napus HOM05D005312 ORTHO05D006459 6.1e-172 607.8 417 78.9
BcaC03g17388 Brassica carinata HOM05D005312 ORTHO05D006459 8.0e-172 607.4 417 78.9
BolC2t11405H Brassica oleracea HOM05D005312 ORTHO05D006459 8.0e-172 607.4 417 78.9
Sp2g15910 Schrenkiella parvula HOM05D005312 ORTHO05D006459 8.0e-172 607.4 395 81.0
BraA02t08484Z Brassica rapa HOM05D005312 ORTHO05D006459 3.0e-171 605.5 420 78.8
AT3G26780 Arabidopsis thaliana HOM05D005312 ORTHO05D006459 1.5e-170 603.2 390 80.0
A02p34780 Brassica napus HOM05D005312 ORTHO05D006459 1.5e-170 603.2 420 79.0
BcaB07g30210 Brassica carinata HOM05D005312 ORTHO05D006459 4.5e-167 591.7 393 78.9
THA.LOC104823996 Tarenaya hassleriana HOM05D005312 ORTHO05D006459 2.2e-166 589.3 399 75.2
Aa31LG1G1910 Aethionema arabicum HOM05D005312 ORTHO05D006459 1.1e-165 587.0 425 75.8
THA.LOC104805304 Tarenaya hassleriana HOM05D005312 ORTHO05D006459 1.5e-165 586.6 397 74.6
Ciclev10015374m.g Citrus clementina HOM05D005312 ORTHO05D006459 1.0e-163 580.5 387 74.2
Atru.chr6.2642 Acer truncatum HOM05D005312 ORTHO05D006459 7.5e-162 574.3 392 74.5
Dinv33289 Davidia involucrata HOM05D005312 ORTHO05D006459 6.6e-158 561.2 392 72.4
CARHR013180 Cardamine hirsuta HOM05D005312 ORTHO05D006459 1.5e-154 550.1 430 71.9
Sp1g11430 Schrenkiella parvula HOM05D005312 ORTHO05D006459 4.4e-154 548.5 428 72.0
AT1G12850 Arabidopsis thaliana HOM05D005312 ORTHO05D006459 1.7e-153 546.6 393 73.3
AL1G24500 Arabidopsis lyrata HOM05D005312 ORTHO05D006459 2.9e-153 545.8 429 71.1
QL02p069878 Quercus lobata HOM05D005312 ORTHO05D006459 2.9e-153 545.8 393 70.5
Cpa.g.sc70.78 Carica papaya HOM05D005312 ORTHO05D006459 6.4e-153 544.7 432 67.6
Carub.0001s1260 Capsella rubella HOM05D005312 ORTHO05D006459 4.1e-152 542.0 386 72.8
TWI32G0425 Tripterygium wilfordii HOM05D005312 ORTHO05D006459 2.0e-151 539.7 394 71.3
COL.COLO4_13349 Corchorus olitorius HOM05D005312 ORTHO05D006459 3.5e-151 538.9 394 69.5
CARHR147850 Cardamine hirsuta HOM05D005312 ORTHO05D006459 5.0e-150 535.0 430 73.3
Hma1.2p1_0868F.1_g230570 Hydrangea macrophylla HOM05D005312 ORTHO05D006459 8.6e-150 534.3 376 71.5
Thecc.04G046000 Theobroma cacao HOM05D005312 ORTHO05D006459 8.6e-150 534.3 393 68.7
Cfa007172 Carpinus fangiana HOM05D005312 ORTHO05D006459 1.1e-149 533.9 392 69.6
Prupe.3G312600 Prunus persica HOM05D005312 ORTHO05D006459 1.5e-149 533.5 397 70.0
Duzib264G0870 Durio zibethinus HOM05D005312 ORTHO05D006459 5.6e-149 531.6 431 69.1
CiPaw.03G003000 Carya illinoinensis HOM05D005312 ORTHO05D006459 1.6e-148 530.0 392 69.1
CSS0036880 Camellia sinensis var. sinensis HOM05D005312 ORTHO05D006459 2.1e-148 529.6 393 68.4
Duzib147G0684 Durio zibethinus HOM05D005312 ORTHO05D006459 6.2e-148 528.1 430 68.4
Manes.11G077500 Manihot esculenta HOM05D005312 ORTHO05D006459 6.2e-148 528.1 435 68.5
Sabra14G0109800 Salix brachista HOM05D005312 ORTHO05D006459 6.8e-147 524.6 385 68.6
Thhalv10007881m.g Eutrema salsugineum HOM05D005312 ORTHO05D006459 8.9e-147 524.2 427 70.5
Potri.014G145900 Populus trichocarpa HOM05D005312 ORTHO05D006459 1.2e-146 523.9 385 69.1
MD17G1007700 Malus domestica HOM05D005312 ORTHO05D006459 1.5e-146 523.5 430 67.4
Peaxi162Scf00420g00087 Petunia axillaris HOM05D005312 ORTHO05D006459 5.8e-146 521.5 388 66.5
CANSAT64G1152 Cannabis sativa HOM05D005312 ORTHO05D006459 9.8e-146 520.8 395 67.3
CAN.G473.156 Capsicum annuum HOM05D005312 ORTHO05D006459 9.8e-146 520.8 385 66.0
RcHm_v2.0_Chr2g0176401 Rosa chinensis HOM05D005312 ORTHO05D006459 3.7e-145 518.8 392 68.4
MD09G1004000 Malus domestica HOM05D005312 ORTHO05D006459 6.4e-145 518.1 392 68.6
Manes.04G092300 Manihot esculenta HOM05D005312 ORTHO05D006459 6.4e-145 518.1 399 66.9
PGSC0003DMG400020194 Solanum tuberosum HOM05D005312 ORTHO05D006459 6.4e-145 518.1 385 66.0
Duzib187G0698 Durio zibethinus HOM05D005312 ORTHO05D006459 8.3e-145 517.7 395 67.3
Rhsim10G0001700 Rhododendron simsii HOM05D005312 ORTHO05D006459 2.4e-144 516.2 394 66.2
Actinidia37728 Actinidia chinensis HOM05D005312 ORTHO05D006459 7.0e-144 514.6 391 67.8
Cc07_g01210 Coffea canephora HOM05D005312 ORTHO05D006459 7.0e-144 514.6 389 67.1
Sopen02g039150 Solanum pennellii HOM05D005312 ORTHO05D006459 1.2e-143 513.8 385 66.2
Solyc02g094480.4 Solanum lycopersicum HOM05D000001 ORTHO05D000003 1.6e-143 513.5 384 66.1
Glyma.02G066000 Glycine max HOM05D005312 ORTHO05D006459 3.5e-143 512.3 391 68.5
Gohir.A07G232100 Gossypium hirsutum HOM05D005312 ORTHO05D006459 6.0e-143 511.5 386 67.9
Potri.002G236600 Populus trichocarpa HOM05D005312 ORTHO05D006459 6.0e-143 511.5 376 68.4
Sabra02G0180200 Salix brachista HOM05D005312 ORTHO05D006459 1.0e-142 510.8 421 66.7
vmacro22240 Vaccinium macrocarpon HOM05D005312 ORTHO05D006459 3.0e-142 509.2 388 67.5
Gohir.D07G239300 Gossypium hirsutum HOM05D005312 ORTHO05D006459 5.0e-142 508.4 386 67.6
Gorai.001G275400 Gossypium raimondii HOM05D005312 ORTHO05D006459 5.0e-142 508.4 386 67.6
FvH4_6g54210 Fragaria vesca HOM05D005312 ORTHO05D006459 8.6e-142 507.7 386 67.1
FAN09G1737 Fragaria x ananassa HOM05D005312 ORTHO05D006459 8.6e-142 507.7 386 67.1
FAN05G1132 Fragaria x ananassa HOM05D005312 ORTHO05D006459 1.1e-141 507.3 386 67.1
BolC8t49199H Brassica oleracea HOM05D005312 ORTHO05D006459 1.5e-141 506.9 430 67.9
TAR629G1483 Trochodendron aralioides HOM05D005312 ORTHO05D006459 1.5e-141 506.9 395 67.3
FAN14G0182 Fragaria x ananassa HOM05D005312 ORTHO05D006459 3.3e-141 505.8 386 66.8
C08p15720 Brassica napus HOM05D005312 ORTHO05D006459 5.6e-141 505.0 430 67.9
Sed0007531 Sechium edule HOM05D005312 ORTHO05D006459 1.2e-140 503.8 427 66.3
ClCG05G012720 Citrullus lanatus HOM05D005312 ORTHO05D006459 3.6e-140 502.3 427 66.5
Lj7A616T62 Lonicera japonica HOM05D005312 ORTHO05D006459 6.2e-140 501.5 389 65.0
Phvul.004G070300 Phaseolus vulgaris HOM05D005312 ORTHO05D006459 6.2e-140 501.5 430 65.3
Glyma.16G146900 Glycine max HOM05D005312 ORTHO05D006459 8.1e-140 501.1 396 66.9
TAR371G0255 Trochodendron aralioides HOM05D005312 ORTHO05D006459 1.1e-139 500.7 396 65.4
FAN02G3987 Fragaria x ananassa HOM05D005312 ORTHO05D006459 1.8e-139 500.0 382 66.8
Oeu039797.1 Olea europaea HOM05D005312 ORTHO05D006459 3.1e-139 499.2 398 63.3
Eucgr.G01940 Eucalyptus grandis HOM05D005312 ORTHO05D006459 4.4e-138 495.4 395 65.8
BcaB03g13161 Brassica carinata HOM05D005312 ORTHO05D006459 5.8e-138 495.0 436 67.0
SalBow4G2016 Salvia bowleyana HOM05D005312 ORTHO05D006459 5.8e-138 495.0 391 64.5
A08p32570 Brassica napus HOM05D005312 ORTHO05D006459 9.8e-138 494.2 392 68.1
Migut.F00017 Erythranthe guttata HOM05D005312 ORTHO05D006459 3.7e-137 492.3 393 65.4
Psat1g097480 Pisum sativum HOM05D005312 ORTHO05D006459 1.4e-136 490.3 388 66.8
Nn4g22171 Nelumbo nucifera HOM05D005312 ORTHO05D006459 2.4e-136 489.6 391 62.7
MELO3C014806.2 Cucumis melo HOM05D005312 ORTHO05D006459 5.4e-136 488.4 428 64.5
BraA08t35181Z Brassica rapa HOM05D005312 ORTHO05D006459 7.1e-136 488.0 392 67.3
DCAR_002973 Daucus carota HOM05D005312 ORTHO05D006459 9.2e-136 487.6 403 63.5
Ah.02g128920 Amaranthus hybridus HOM05D005312 ORTHO05D006459 1.6e-135 486.9 396 64.6
Lj2g0017210 Lotus japonicus HOM05D005312 ORTHO05D006459 3.5e-135 485.7 389 65.8
MSTRG.3045 Avicennia marina HOM05D005312 ORTHO05D006459 1.7e-134 483.4 391 62.9
Lalb_Chr06g0173771 Lupinus albus HOM05D005312 ORTHO05D006459 6.6e-134 481.5 385 66.2
TPR.G36663 Trifolium pratense HOM05D005312 ORTHO05D006459 1.1e-133 480.7 394 63.5
Medtr6g033275 Medicago truncatula HOM05D005312 ORTHO05D006459 2.5e-133 479.6 387 64.9
EL10As7g23753 Beta vulgaris HOM05D005312 ORTHO05D006459 3.3e-133 479.2 401 63.3
SGA_v2.0_scaffold44G16946 Striga asiatica HOM05D005312 ORTHO05D006459 8.1e-132 474.6 396 63.6
arahy.Tifrunner.gnm1.ann1.ZY683S Arachis hypogaea HOM05D005312 ORTHO05D006459 2.3e-131 473.0 404 61.9
arahy.Tifrunner.gnm1.ann1.JN3C7K Arachis hypogaea HOM05D005312 ORTHO05D006459 5.2e-131 471.9 408 61.5
Lalb_Chr02g0156821 Lupinus albus HOM05D005312 ORTHO05D006459 1.2e-130 470.7 388 65.7
Sc03g0004830 Simmondsia chinensis HOM05D005312 ORTHO05D006459 5.8e-130 468.4 396 62.4
Nitab4.5_0025697g0010 Nicotiana tabacum HOM05D005312 ORTHO05D006459 1.3e-129 467.2 358 64.5
PGR083G1093 Punica granatum HOM05D005312 ORTHO05D006459 1.2e-127 460.7 386 63.0
Aqoxy5G03173 Aquilegia oxysepala HOM05D005312 ORTHO05D006459 1.0e-126 457.6 433 61.2
HanXRQChr14g0451381 Helianthus annuus HOM05D005312 ORTHO05D006459 1.3e-126 457.2 374 64.2
CSS0020784 Camellia sinensis var. sinensis HOM05D005312 ORTHO05D006459 1.7e-126 456.8 387 62.3
AUR62041074 Chenopodium quinoa HOM05D005312 ORTHO05D006459 8.6e-126 454.5 382 63.1
MBI07_g40342_MAGBIO Magnolia biondii HOM05D005312 ORTHO05D006459 9.6e-125 451.1 376 63.3
PSO478G3188 Papaver somniferum HOM05D005312 ORTHO05D006459 1.6e-124 450.3 391 63.2
Oeu003422.1 Olea europaea HOM05D005312 ORTHO05D006459 3.6e-124 449.1 409 58.4
PSO017G1316 Papaver somniferum HOM05D005312 ORTHO05D006459 4.7e-124 448.7 401 62.3
Lsat_1_v5_gn_2_94460 Lactuca sativa HOM05D005312 ORTHO05D006459 9.3e-120 434.5 377 60.7
Gohir.D10G081000 Gossypium hirsutum HOM05D005312 ORTHO05D006459 1.1e-117 427.6 381 57.0
Gorai.011G088100 Gossypium raimondii HOM05D005312 ORTHO05D006459 1.9e-117 426.8 381 56.7
Nitab4.5_0002172g0150 Nicotiana tabacum HOM05D005312 ORTHO05D006459 2.5e-117 426.4 393 56.7
Gohir.A10G070100 Gossypium hirsutum HOM05D005312 ORTHO05D006459 1.1e-115 421.0 381 55.9
CDE02G3855 Ceratophyllum demersum HOM05D005312 ORTHO05D006459 1.0e-110 404.4 381 59.3
CDE06G1073 Ceratophyllum demersum HOM05D005312 ORTHO05D006459 3.9e-110 402.5 381 58.0
ATR0582G189 Amborella trichopoda HOM05D005312 ORTHO05D006459 4.3e-109 399.1 415 53.3
AUR62037835 Chenopodium quinoa HOM05D005312 ORTHO05D006459 7.4e-109 398.3 320 64.4
Zm00001eb170350 Zea mays HOM05D005312 ORTHO05D006459 3.1e-107 392.9 375 56.3
Os11g0522000 Oryza sativa ssp. japonica HOM05D005312 ORTHO05D006459 7.1e-104 381.7 381 52.8
GSVIVG01033003001 Vitis vinifera HOM05D005312 ORTHO05D006459 5.6e-101 372.1 310 62.6
SEGI_01379 Sequoiadendron giganteum HOM05D005312 ORTHO05D006459 1.2e-98 364.4 393 49.4
ECA238G3491 Erigeron canadensis HOM05D000001 ORTHO05D000003 8.5e-89 331.6 329 55.9
Ca_26608_v3 Cicer arietinum L. HOM05D005312 ORTHO05D006459 2.0e-82 310.5 426 44.6
VMungo0464G0174 Vigna mungo HOM05D005312 ORTHO05D006459 3.6e-79 299.7 242 65.3
SEGI_20575 Sequoiadendron giganteum HOM05D005312 ORTHO05D006459 4.4e-69 266.2 295 48.8
Pp3c21_20660 Physcomitrium patens HOM05D005312 ORTHO05D006459 1.3e-68 264.6 398 38.9
unitig_37.g12041 Utricularia gibba HOM05D005312 ORTHO05D006459 1.3e-65 254.6 224 57.6
HPP92_008243 Vanilla planifolia HOM05D005312 ORTHO05D006459 3.7e-60 236.5 231 56.7
ECA246G2144 Erigeron canadensis HOM05D005312 ORTHO05D006459 4.1e-59 233.0 239 49.8
Actinidia19557 Actinidia chinensis HOM05D005312 ORTHO05D006459 1.0e-54 218.4 150 71.3
Nn3g16305 Nelumbo nucifera HOM05D005312 ORTHO05D006459 2.2e-52 210.7 205 56.1
VMungo0464G1790 Vigna mungo HOM05D005312 ORTHO05D006459 1.1e-51 208.4 151 71.5
Haze_14938 Corylus avellana HOM05D005312 ORTHO05D006459 4.5e-50 203.0 154 68.2
CSS0007293 Camellia sinensis var. sinensis HOM05D005312 ORTHO05D006459 2.9e-49 200.3 153 67.3
unitig_37.g12040 Utricularia gibba HOM05D005312 ORTHO05D006459 9.2e-43 178.7 145 63.4
CBR_g2835 Chara braunii HOM05D005312 ORTHO05D006459 5.9e-42 176.0 356 32.3
AagrBONN_evm.TU.Sc2ySwM_344.1953 Anthoceros agrestis HOM05D005312 ORTHO05D006459 3.3e-40 170.2 321 34.3
SGA_v2.0_scaffold173G39196 Striga asiatica HOM05D005312 ORTHO05D006459 9.2e-19 99.0 111 52.3
CARHR120940 Cardamine hirsuta HOM05D005312 ORTHO05D006459 6.0e-18 96.3 65 76.9
SEGI_29311 Sequoiadendron giganteum HOM05D005312 ORTHO05D006459 2.0e-13 81.3 75 52.0
PRCOL_00002808 Prasinoderma coloniale HOM05D005312 ORTHO05D006459 1.9e-11 74.7 166 30.7
C05p10420 Brassica napus HOM05D005312 ORTHO05D006459 5.6e-08 63.2 36 72.2
C08p14660 Brassica napus HOM05D023945 ORTHO05D042485 2.8e-07 60.8 47 59.6
Actinidia19558 Actinidia chinensis HOM05D005312 ORTHO05D006459 1.4e-06 58.5 93 44.1


User provided reference genes

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