Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G5540 Aethionema arabicum HOM05D001420 ORTHO05D009292 9.1e-96 353.6 182 100.0
AT3G27050 Arabidopsis thaliana HOM05D001420 ORTHO05D009292 2.7e-79 298.9 181 85.1
BcaB04g19424 Brassica carinata HOM05D001420 ORTHO05D009292 2.7e-79 298.9 182 83.0
BcaC04g23914 Brassica carinata HOM05D001420 ORTHO05D009292 2.7e-79 298.9 182 83.5
A09p03260 Brassica napus HOM05D001420 ORTHO05D009292 2.7e-79 298.9 183 84.7
BraA09t35964Z Brassica rapa HOM05D001420 ORTHO05D009292 2.7e-79 298.9 183 84.7
Sp2g16180 Schrenkiella parvula HOM05D001420 ORTHO05D009292 2.7e-79 298.9 182 84.1
BolC9t53267H Brassica oleracea HOM05D001420 ORTHO05D009292 2.2e-78 295.8 183 83.6
AL5G16160 Arabidopsis lyrata HOM05D001420 ORTHO05D009292 3.8e-78 295.0 180 84.4
C09p03460 Brassica napus HOM05D001420 ORTHO05D009292 6.5e-78 294.3 183 83.1
Thhalv10004992m.g Eutrema salsugineum HOM05D001420 ORTHO05D009292 8.5e-78 293.9 182 83.0
Carub.0005s0529 Capsella rubella HOM05D001420 ORTHO05D009292 1.6e-76 289.7 181 82.3
CARHR148270 Cardamine hirsuta HOM05D001420 ORTHO05D009292 1.2e-74 283.5 182 79.7
THA.LOC104825624 Tarenaya hassleriana HOM05D001420 ORTHO05D009292 1.1e-72 276.9 177 78.0
Prupe.3G306700 Prunus persica HOM05D001420 ORTHO05D009292 2.5e-61 239.2 177 68.4
Potri.001G329600 Populus trichocarpa HOM05D001420 ORTHO05D009292 7.3e-61 237.7 179 68.7
vmacro18348 Vaccinium macrocarpon HOM05D001420 ORTHO05D009292 9.5e-61 237.3 178 67.4
Nitab4.5_0005161g0070 Nicotiana tabacum HOM05D001420 ORTHO05D009292 2.1e-60 236.1 179 65.9
MD09G1010400 Malus domestica HOM05D001420 ORTHO05D009292 8.0e-60 234.2 174 66.7
GSVIVG01033089001 Vitis vinifera HOM05D001420 ORTHO05D009292 1.0e-59 233.8 178 65.7
Cpa.g.sc171.11 Carica papaya HOM05D001420 ORTHO05D009292 1.4e-59 233.4 180 65.6
RcHm_v2.0_Chr2g0175601 Rosa chinensis HOM05D001420 ORTHO05D009292 1.4e-59 233.4 180 65.6
Eucgr.I01645 Eucalyptus grandis HOM05D001420 ORTHO05D009292 1.8e-59 233.0 181 66.3
CSS0004965 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 3.0e-59 232.3 178 66.9
Haze_14879 Corylus avellana HOM05D001420 ORTHO05D009292 3.0e-59 232.3 176 65.9
Glyma.19G091500 Glycine max HOM05D001420 ORTHO05D009292 3.0e-59 232.3 178 64.6
Lj1g0001542 Lotus japonicus HOM05D001420 ORTHO05D009292 8.9e-59 230.7 181 64.1
Dinv25658 Davidia involucrata HOM05D001420 ORTHO05D002488 1.5e-58 229.9 180 64.4
PGR142G3591 Punica granatum HOM05D001420 ORTHO05D009292 1.5e-58 229.9 178 65.7
arahy.Tifrunner.gnm1.ann1.WDB61R Arachis hypogaea HOM05D001420 ORTHO05D009292 2.0e-58 229.6 182 64.3
FvH4_6g53561 Fragaria vesca HOM05D001420 ORTHO05D009292 3.4e-58 228.8 177 64.4
Thecc.04G036700 Theobroma cacao HOM05D001420 ORTHO05D009292 3.4e-58 228.8 180 63.3
FAN09G1657 Fragaria x ananassa HOM05D001420 ORTHO05D009292 9.8e-58 227.3 177 63.8
Gohir.A09G036000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 9.8e-58 227.3 175 64.6
MBI11_g44423_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 9.8e-58 227.3 175 65.1
Medtr7g029105 Medicago truncatula HOM05D001420 ORTHO05D009292 9.8e-58 227.3 174 64.9
Actinidia04437 Actinidia chinensis HOM05D001420 ORTHO05D009292 1.7e-57 226.5 171 66.7
Oeu035224.1 Olea europaea HOM05D001420 ORTHO05D009292 1.7e-57 226.5 178 65.2
Sc15g0002740 Simmondsia chinensis HOM05D001420 ORTHO05D009292 1.7e-57 226.5 169 66.9
Manes.15G161200 Manihot esculenta HOM05D001420 ORTHO05D009292 2.2e-57 226.1 175 65.7
Migut.F00060 Erythranthe guttata HOM05D001420 ORTHO05D009292 2.9e-57 225.7 175 62.3
QL02p071311 Quercus lobata HOM05D001420 ORTHO05D009292 2.9e-57 225.7 181 63.5
Gorai.006G042300 Gossypium raimondii HOM05D001420 ORTHO05D009292 4.9e-57 224.9 177 61.6
Duzib147G1300 Durio zibethinus HOM05D001420 ORTHO05D009292 6.4e-57 224.6 178 62.4
Cc07_g00860 Coffea canephora HOM05D001420 ORTHO05D009292 1.1e-56 223.8 174 64.4
Nitab4.5_0000559g0390 Nicotiana tabacum HOM05D001420 ORTHO05D009292 1.1e-56 223.8 186 62.4
CSS0009369 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 1.8e-56 223.0 192 62.0
MSTRG.3074 Avicennia marina HOM05D001420 ORTHO05D009292 2.4e-56 222.6 176 62.5
CANSAT64G1297 Cannabis sativa HOM05D001420 ORTHO05D009292 4.1e-56 221.9 174 64.4
TPR.G38286 Trifolium pratense HOM05D001420 ORTHO05D009292 4.1e-56 221.9 177 62.1
AUR62003518 Chenopodium quinoa HOM05D001420 ORTHO05D009292 1.6e-55 219.9 178 62.4
Psat3g174720 Pisum sativum HOM05D001420 ORTHO05D002488 1.6e-55 219.9 173 63.6
AUR62017830 Chenopodium quinoa HOM05D001420 ORTHO05D009292 2.0e-55 219.5 173 63.6
TWI60G0015 Tripterygium wilfordii HOM05D001420 ORTHO05D009292 2.7e-55 219.2 181 60.8
FAN05G4256 Fragaria x ananassa HOM05D001420 ORTHO05D009292 3.5e-55 218.8 189 59.3
Glyma.16G056200 Glycine max HOM05D001420 ORTHO05D009292 3.5e-55 218.8 174 61.5
FAN14G1551 Fragaria x ananassa HOM05D001420 ORTHO05D000136 4.6e-55 218.4 167 65.3
VMungo1383G3091 Vigna mungo HOM05D001420 ORTHO05D009292 4.6e-55 218.4 176 61.4
TAR622G0082 Trochodendron aralioides HOM05D001420 ORTHO05D009292 5.9e-55 218.0 170 64.7
SGA_v2.0_scaffold44G16915 Striga asiatica HOM05D001420 ORTHO05D009292 1.0e-54 217.2 176 59.7
Hma1.2p1_1278F.1_g272270 Hydrangea macrophylla HOM05D001420 ORTHO05D009292 1.3e-54 216.9 181 61.9
Lalb_Chr22g0360361 Lupinus albus HOM05D001420 ORTHO05D009292 1.7e-54 216.5 173 61.8
Nn3g16459 Nelumbo nucifera HOM05D001420 ORTHO05D009292 1.5e-53 213.4 174 62.1
Rhsim08G0042700 Rhododendron simsii HOM05D001420 ORTHO05D009292 2.8e-52 209.1 171 63.7
PSO478G4377 Papaver somniferum HOM05D001420 ORTHO05D009292 1.0e-51 207.2 180 60.6
PGSC0003DMG400022915 Solanum tuberosum HOM05D001420 ORTHO05D009292 1.8e-51 206.5 174 60.9
Aqoxy3G01555 Aquilegia oxysepala HOM05D001420 ORTHO05D009292 3.1e-51 205.7 170 61.8
HPP92_009721 Vanilla planifolia HOM05D001420 ORTHO05D009292 1.2e-50 203.8 172 63.4
ATR0561G272 Amborella trichopoda HOM05D001420 ORTHO05D009292 7.5e-50 201.1 172 57.6
HanXRQChr17g0550091 Helianthus annuus HOM05D001420 ORTHO05D009292 9.8e-50 200.7 160 63.1
SalBow4G1795 Salvia bowleyana HOM05D001420 ORTHO05D009292 9.8e-50 200.7 176 57.4
Sabra16G0211000 Salix brachista HOM05D001420 ORTHO05D009292 1.3e-49 200.3 254 48.0
unitig_60.g25408 Utricularia gibba HOM05D001420 ORTHO05D009292 1.1e-48 197.2 179 57.0
Cfa007225 Carpinus fangiana HOM05D001420 ORTHO05D009292 2.4e-48 196.1 143 67.1
ClCG05G013550 Citrullus lanatus HOM05D001420 ORTHO05D009292 2.4e-48 196.1 166 62.0
PSO017G5378 Papaver somniferum HOM05D001420 ORTHO05D009292 9.2e-48 194.1 185 57.3
Lsat_1_v5_gn_0_26060 Lactuca sativa HOM05D001420 ORTHO05D009292 2.7e-47 192.6 160 59.4
Haze_14955 Corylus avellana HOM05D001420 ORTHO05D009292 3.5e-47 192.2 141 67.4
CsaV3_3G026980 Cucumis sativus L. HOM05D001420 ORTHO05D009292 7.8e-47 191.0 171 58.5
Sed0020252 Sechium edule HOM05D001420 ORTHO05D009292 1.0e-46 190.7 168 60.1
CDE05G2056 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 3.3e-45 185.7 174 54.0
Gohir.D09G037000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 3.3e-45 185.7 143 62.2
Atru.chr6.2574 Acer truncatum HOM05D001420 ORTHO05D009292 4.3e-45 185.3 146 63.0
ECA246G1005 Erigeron canadensis HOM05D001420 ORTHO05D002488 4.3e-45 185.3 161 55.9
SalBow4G0299 Salvia bowleyana HOM05D001420 ORTHO05D009292 7.3e-45 184.5 207 48.8
Phvul.001G093200 Phaseolus vulgaris HOM05D001420 ORTHO05D009292 1.4e-43 180.3 178 52.2
Peaxi162Scf00700g00030 Petunia axillaris HOM05D001420 ORTHO05D009292 1.8e-43 179.9 140 65.0
RcHm_v2.0_Chr2g0175681 Rosa chinensis HOM05D001420 ORTHO05D009292 7.5e-42 174.5 138 65.9
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 1.7e-41 173.3 139 63.3
AagrBONN_evm.TU.Sc2ySwM_228.3079 Anthoceros agrestis HOM05D001420 ORTHO05D009292 8.3e-41 171.0 171 49.7
SEGI_21368 Sequoiadendron giganteum HOM05D001420 ORTHO05D009292 1.9e-40 169.9 164 50.6
Ciclev10017089m.g Citrus clementina HOM05D001420 ORTHO05D009292 4.1e-40 168.7 140 60.7
MELO3C014890.2 Cucumis melo HOM05D001420 ORTHO05D009292 5.4e-40 168.3 146 59.6
Os11g0488600 Oryza sativa ssp. japonica HOM05D001420 ORTHO05D009292 5.4e-40 168.3 175 52.0
Dinv33335 Davidia involucrata HOM05D001420 ORTHO05D009292 7.8e-39 164.5 121 65.3
Pp3c1_27230 Physcomitrium patens HOM05D001420 ORTHO05D009292 7.8e-39 164.5 164 50.0
Pp3c14_4200 Physcomitrium patens HOM05D001420 ORTHO05D009292 2.3e-38 162.9 161 48.4
SMO119G0238 Selaginella moellendorffii HOM05D001420 ORTHO05D009292 5.6e-37 158.3 141 56.0
Zm00001eb112760 Zea mays HOM05D001420 ORTHO05D009292 7.3e-37 157.9 199 44.7
Ah.03g147520 Amaranthus hybridus HOM05D001420 ORTHO05D009292 1.1e-35 154.1 140 58.6
Lj7C610G7 Lonicera japonica HOM05D001420 ORTHO05D009292 9.2e-32 141.0 117 60.7
MD16G1254400 Malus domestica HOM05D001420 ORTHO05D009292 2.1e-31 139.8 123 60.2
CBR_g762 Chara braunii HOM05D001420 ORTHO05D009292 4.7e-28 128.6 160 40.0
CDE05G0537 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 1.7e-25 120.2 112 53.6
CiPaw.03G055800 Carya illinoinensis HOM05D001420 ORTHO05D002488 8.4e-17 91.3 59 72.9
DCAR_021795 Daucus carota HOM05D001420 ORTHO05D009292 4.2e-16 89.0 89 52.8
FAN02G0503 Fragaria x ananassa HOM05D001420 ORTHO05D009292 3.9e-14 82.4 66 63.6
Hund12739 Selenicereus undatus HOM05D001420 ORTHO05D009292 2.8e-12 76.3 52 71.2
Cre01.g049050 Chlamydomonas reinhardtii HOM05D001420 ORTHO05D009292 2.0e-10 70.1 148 28.4
Nitab4.5_0000525g0030 Nicotiana tabacum HOM05D001420 ORTHO05D009292 2.2e-09 66.6 42 71.4


User provided reference genes

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