Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G5400 Aethionema arabicum HOM05D004407 ORTHO05D005074 8.5e-108 393.7 195 100.0
CARHR213820 Cardamine hirsuta HOM05D004407 ORTHO05D005074 1.1e-49 200.7 213 55.9
A04p13730 Brassica napus HOM05D004407 ORTHO05D005074 1.2e-48 197.2 221 54.8
Carub.0007s3479 Capsella rubella HOM05D004407 ORTHO05D005074 1.5e-48 196.8 214 55.1
BolC4t26352H Brassica oleracea HOM05D004407 ORTHO05D005074 2.0e-48 196.4 205 56.6
THA.LOC104825308 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 2.6e-48 196.1 204 56.4
THA.LOC104805351 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 5.8e-48 194.9 135 72.6
BraA04t17032Z Brassica rapa HOM05D004407 ORTHO05D005074 5.4e-46 188.3 224 52.7
Thhalv10028148m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 7.1e-46 188.0 211 52.6
Sp7g01180 Schrenkiella parvula HOM05D004407 ORTHO05D005074 9.2e-46 187.6 128 70.3
PGR083G0262 Punica granatum HOM05D004407 ORTHO05D005074 1.9e-43 179.9 201 51.7
TWI36G1179 Tripterygium wilfordii HOM05D004407 ORTHO05D005074 1.9e-43 179.9 195 53.3
C04p47510 Brassica napus HOM05D004407 ORTHO05D005074 9.5e-43 177.6 227 49.8
QL02p073303 Quercus lobata HOM05D004407 ORTHO05D005074 1.8e-41 173.3 211 51.2
QL02p073308 Quercus lobata HOM05D004407 ORTHO05D005074 1.8e-41 173.3 211 51.2
MD09G1018600 Malus domestica HOM05D004407 ORTHO05D005074 2.4e-41 172.9 202 49.5
Prupe.3G298600 Prunus persica HOM05D004407 ORTHO05D005074 5.2e-41 171.8 201 50.2
MD17G1019100 Malus domestica HOM05D004407 ORTHO05D005074 6.8e-41 171.4 199 50.8
Haze_14799 Corylus avellana HOM05D002760 ORTHO05D003169 1.2e-40 170.6 209 50.2
Ciclev10017684m.g Citrus clementina HOM05D004407 ORTHO05D005074 4.4e-40 168.7 207 47.3
CiPaw.03G049400 Carya illinoinensis HOM05D004407 ORTHO05D005074 7.6e-40 167.9 204 48.0
Thecc.04G026300 Theobroma cacao HOM05D004407 ORTHO05D005074 8.4e-39 164.5 216 47.2
Manes.15G155400 Manihot esculenta HOM05D004407 ORTHO05D005074 2.4e-38 162.9 222 46.8
Nn3g16588 Nelumbo nucifera HOM05D004407 ORTHO05D005074 3.2e-38 162.5 197 47.2
CANSAT64G2558 Cannabis sativa HOM05D004407 ORTHO05D005074 7.1e-38 161.4 212 49.1
Gorai.012G091100 Gossypium raimondii HOM05D004407 ORTHO05D005074 7.1e-38 161.4 202 48.0
AT5G40690 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 1.2e-37 160.6 209 48.3
Duzib187G1586 Durio zibethinus HOM05D004407 ORTHO05D005074 3.5e-37 159.1 201 47.3
CSS0009144 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.6e-37 158.7 218 46.3
Eucgr.J02274 Eucalyptus grandis HOM05D004407 ORTHO05D005074 4.6e-37 158.7 208 46.2
Aqoxy3G01382 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 6.0e-37 158.3 194 46.4
AL7G49050 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 7.8e-37 157.9 213 47.9
Gohir.D04G080420 Gossypium hirsutum HOM05D004407 ORTHO05D005074 1.0e-36 157.5 202 47.5
Gorai.006G037000 Gossypium raimondii HOM05D004407 ORTHO05D005074 1.0e-36 157.5 132 60.6
Actinidia05950 Actinidia chinensis HOM05D004407 ORTHO05D005074 5.1e-36 155.2 190 48.9
BcaB02g07933 Brassica carinata HOM05D004407 ORTHO05D005074 1.1e-35 154.1 200 48.5
CAN.G473.50 Capsicum annuum HOM05D004407 ORTHO05D005074 1.9e-35 153.3 208 47.6
FvH4_6g52330 Fragaria vesca HOM05D004407 ORTHO05D005074 1.9e-35 153.3 194 45.4
Gohir.A09G032000 Gossypium hirsutum HOM05D004407 ORTHO05D005074 1.9e-35 153.3 189 48.7
Rhsim10G0012400 Rhododendron simsii HOM05D004407 ORTHO05D005074 1.9e-35 153.3 136 57.4
Nitab4.5_0001031g0160 Nicotiana tabacum HOM05D004407 ORTHO05D005074 2.5e-35 152.9 220 45.9
Sed0027888 Sechium edule HOM05D004407 ORTHO05D005074 2.5e-35 152.9 196 48.0
Thhalv10028030m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 4.3e-35 152.1 199 51.3
Nn4g22470 Nelumbo nucifera HOM05D004407 ORTHO05D005074 4.3e-35 152.1 207 45.9
Nitab4.5_0001863g0220 Nicotiana tabacum HOM05D004407 ORTHO05D005074 4.3e-35 152.1 191 48.2
Solyc02g093710.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 9.6e-35 151.0 197 49.7
TAR622G1038 Trochodendron aralioides HOM05D004407 ORTHO05D005074 1.2e-34 150.6 207 44.9
Sopen02g038350 Solanum pennellii HOM05D004407 ORTHO05D005074 1.6e-34 150.2 203 48.8
VMungo1383G1696 Vigna mungo HOM05D004407 ORTHO05D005074 3.1e-33 146.0 153 51.6
Aa31LG9G940 Aethionema arabicum HOM05D004407 ORTHO05D005074 4.0e-33 145.6 201 49.3
PGSC0003DMG400012626 Solanum tuberosum HOM05D004407 ORTHO05D005074 4.0e-33 145.6 203 45.3
Cpa.g.sc130.51 Carica papaya HOM05D004407 ORTHO05D005074 5.2e-33 145.2 212 47.6
Sabra16G0217100 Salix brachista HOM05D004407 ORTHO05D005074 2.0e-32 143.3 199 45.7
Sp2g16550 Schrenkiella parvula HOM05D013829 ORTHO05D015952 2.6e-32 142.9 198 49.5
FAN05G1079 Fragaria x ananassa HOM05D004407 ORTHO05D005074 4.4e-32 142.1 194 43.8
Potri.001G336200 Populus trichocarpa HOM05D004407 ORTHO05D005074 4.4e-32 142.1 201 44.8
GSVIVG01003970001 Vitis vinifera HOM05D004407 ORTHO05D005074 5.8e-32 141.7 103 64.1
EL10Ac4g07679 Beta vulgaris HOM05D004407 ORTHO05D005074 9.9e-32 141.0 122 57.4
Potri.001G338100 Populus trichocarpa HOM05D004407 ORTHO05D005074 1.7e-31 140.2 130 54.6
COL.COLO4_29257 Corchorus olitorius HOM05D004407 ORTHO05D005074 3.8e-31 139.0 87 74.7
Thecc.04G026400 Theobroma cacao HOM05D004407 ORTHO05D005074 6.4e-31 138.3 226 39.8
MBI11_g29154_MAGBIO Magnolia biondii HOM05D004407 ORTHO05D005074 8.4e-31 137.9 204 44.6
TAR625G1142 Trochodendron aralioides HOM05D004407 ORTHO05D005074 1.1e-30 137.5 136 52.9
Oeu054661.1 Olea europaea HOM05D004407 ORTHO05D005074 1.9e-30 136.7 198 46.0
Sed0009704 Sechium edule HOM05D004407 ORTHO05D005074 2.4e-30 136.3 100 65.0
Medtr1g051195 Medicago truncatula HOM05D004407 ORTHO05D005074 4.2e-30 135.6 195 43.6
Gohir.A05G342300 Gossypium hirsutum HOM05D004407 ORTHO05D005074 9.3e-30 134.4 96 66.7
Ah.06g182110 Amaranthus hybridus HOM05D004407 ORTHO05D005074 1.2e-29 134.0 230 39.1
Prupe.3G298500 Prunus persica HOM05D004407 ORTHO05D005074 1.6e-29 133.7 129 53.5
BcaC06g33826 Brassica carinata HOM05D013829 ORTHO05D015952 2.1e-29 133.3 200 47.5
Phvul.008G156900 Phaseolus vulgaris HOM05D004407 ORTHO05D005074 2.7e-29 132.9 151 49.0
Carub.0005s0566 Capsella rubella HOM05D013829 ORTHO05D015952 4.6e-29 132.1 203 48.3
Cc07_g00320 Coffea canephora HOM05D004407 ORTHO05D005074 4.6e-29 132.1 220 42.3
DCAR_015072 Daucus carota HOM05D004407 ORTHO05D005074 4.6e-29 132.1 123 52.8
PSO063G0264 Papaver somniferum HOM05D004407 ORTHO05D005074 7.8e-29 131.3 133 51.1
Glyma.02G190900 Glycine max HOM05D004407 ORTHO05D005074 1.7e-28 130.2 194 43.3
DCAR_015074 Daucus carota HOM05D004407 ORTHO05D005074 2.3e-28 129.8 123 52.0
PSO832G4071 Papaver somniferum HOM05D004407 ORTHO05D005074 2.3e-28 129.8 199 41.2
Rhsim10G0012300 Rhododendron simsii HOM05D004407 ORTHO05D005074 3.0e-28 129.4 191 42.4
AL5G16690 Arabidopsis lyrata HOM05D013829 ORTHO05D015952 6.6e-28 128.3 197 46.2
Hma1.2p1_1484F.1_g286410 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 8.7e-28 127.9 130 53.1
RcHm_v2.0_Chr2g0173921 Rosa chinensis HOM05D004407 ORTHO05D005074 1.1e-27 127.5 169 44.4
ClCG09G019590 Citrullus lanatus HOM05D004407 ORTHO05D005074 2.5e-27 126.3 200 42.0
PSO017G7028 Papaver somniferum HOM05D004407 ORTHO05D005074 2.5e-27 126.3 203 40.4
CsaV3_5G026800 Cucumis sativus L. HOM05D004407 ORTHO05D005074 3.3e-27 125.9 215 41.4
Hma1.2p1_0818F.1_g223530 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 3.3e-27 125.9 130 53.1
Duzib264G0535 Durio zibethinus HOM05D004407 ORTHO05D005074 4.3e-27 125.6 186 41.9
PSO407G0367 Papaver somniferum HOM05D004407 ORTHO05D005074 4.3e-27 125.6 144 47.2
Sed0005342 Sechium edule HOM05D004407 ORTHO05D005074 7.3e-27 124.8 86 66.3
CANSAT64G1834 Cannabis sativa HOM05D004407 ORTHO05D005074 9.6e-27 124.4 139 49.6
Hma1.2p1_1484F.1_g286386 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.3e-26 124.0 130 52.3
Psat0s1368g0080 Pisum sativum HOM05D004407 ORTHO05D005074 1.6e-26 123.6 155 49.0
MSTRG.24058 Avicennia marina HOM05D004407 ORTHO05D005074 2.8e-26 122.9 150 48.0
Sabra16G0218800 Salix brachista HOM05D000111 ORTHO05D000134 3.6e-26 122.5 124 50.8
Hma1.2p1_0818F.1_g223560 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 6.2e-26 121.7 130 51.5
MELO3C021614.2 Cucumis melo HOM05D004407 ORTHO05D005074 8.1e-26 121.3 214 39.3
TPR.G1219 Trifolium pratense HOM05D004407 ORTHO05D005074 8.1e-26 121.3 147 50.3
FAN14G0353 Fragaria x ananassa HOM05D004407 ORTHO05D005074 1.1e-25 120.9 92 60.9
TPR.G1105 Trifolium pratense HOM05D004407 ORTHO05D005074 1.1e-25 120.9 198 41.9
Aqoxy4G01774 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 1.4e-25 120.6 122 51.6
Migut.K01432 Erythranthe guttata HOM05D004407 ORTHO05D005074 1.8e-25 120.2 124 52.4
Ca_03872_v3 Cicer arietinum L. HOM05D004407 ORTHO05D005074 2.4e-25 119.8 196 41.8
Hma1.2p1_0279F.1_g112130 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 4.0e-25 119.0 119 53.8
Lsat_1_v5_gn_2_93521 Lactuca sativa HOM05D004407 ORTHO05D005074 4.0e-25 119.0 136 50.7
Hma1.2p1_1484F.1_g286420 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 6.9e-25 118.2 131 52.7
Hma1.2p1_0818F.1_g223550 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 9.0e-25 117.9 131 51.9
TAR374G1728 Trochodendron aralioides HOM05D004407 ORTHO05D005074 1.2e-24 117.5 186 43.0
Dinv25704 Davidia involucrata HOM05D004407 ORTHO05D005074 4.5e-24 115.5 183 44.3
Hma1.2p1_0818F.1_g223510 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 7.6e-24 114.8 98 61.2
PGR083G0848 Punica granatum HOM05D004407 ORTHO05D005074 1.7e-23 113.6 149 46.3
C07p36420 Brassica napus HOM05D013829 ORTHO05D015952 2.2e-23 113.2 201 45.3
Hma1.2p1_1484F.1_g286390 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.9e-23 112.8 131 50.4
BcaB07g31285 Brassica carinata HOM05D004407 ORTHO05D005074 3.8e-23 112.5 122 49.2
AT3G27355 Arabidopsis thaliana HOM05D013829 ORTHO05D015952 6.4e-23 111.7 203 41.4
PGR083G1149 Punica granatum HOM05D004407 ORTHO05D005074 8.4e-23 111.3 142 47.2
ECA238G3732 Erigeron canadensis HOM05D004407 ORTHO05D005074 1.1e-22 110.9 144 48.6
SGA_v2.0_scaffold47G17536 Striga asiatica HOM05D004407 ORTHO05D005074 1.1e-22 110.9 196 39.3
Aqoxy5G03597 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 1.4e-22 110.5 249 34.5
BcaC04g22350 Brassica carinata HOM05D004407 ORTHO05D005074 1.4e-22 110.5 84 61.9
C09p20260 Brassica napus HOM05D006758 ORTHO05D008326 1.4e-22 110.5 84 61.9
BolC9t54931H Brassica oleracea HOM05D006758 ORTHO05D008326 1.4e-22 110.5 84 61.9
Sc03g0006940 Simmondsia chinensis HOM05D004407 ORTHO05D005074 1.4e-22 110.5 210 39.5
Sc03g0006970 Simmondsia chinensis HOM05D004407 ORTHO05D005074 2.4e-22 109.8 210 37.6
ECA238G3518 Erigeron canadensis HOM05D004407 ORTHO05D005074 4.2e-22 109.0 144 47.9
BolC7t44160H Brassica oleracea HOM05D013829 ORTHO05D015952 5.4e-22 108.6 208 45.2
PGSC0003DMG400006921 Solanum tuberosum HOM05D004407 ORTHO05D005074 9.3e-22 107.8 137 47.4
Sopen02g017070 Solanum pennellii HOM05D000413 ORTHO05D005074 1.2e-21 107.5 137 46.7
HanXRQChr09g0255761 Helianthus annuus HOM05D004407 ORTHO05D005074 2.1e-21 106.7 132 47.0
Duzib187G1582 Durio zibethinus HOM05D004407 ORTHO05D005074 2.7e-21 106.3 152 40.1
A09p16650 Brassica napus HOM05D006758 ORTHO05D008326 3.5e-21 105.9 84 60.7
BraA09t37304Z Brassica rapa HOM05D006758 ORTHO05D008326 3.5e-21 105.9 84 60.7
Migut.H00046 Erythranthe guttata HOM05D004407 ORTHO05D005074 1.3e-20 104.0 139 46.0
A06p41240 Brassica napus HOM05D013829 ORTHO05D015952 2.3e-20 103.2 205 44.4
BraA06t27048Z Brassica rapa HOM05D013829 ORTHO05D015952 2.3e-20 103.2 205 44.4
AUR62020325 Chenopodium quinoa HOM05D004407 ORTHO05D005074 3.9e-20 102.4 240 35.0
CARHR025870 Cardamine hirsuta HOM05D004407 ORTHO05D005074 6.7e-20 101.7 132 43.9
HanXRQChr14g0451031 Helianthus annuus HOM05D004407 ORTHO05D005074 6.7e-20 101.7 158 43.0
A05p02450 Brassica napus HOM05D004407 ORTHO05D005074 1.1e-19 100.9 89 57.3
BraA05t19239Z Brassica rapa HOM05D004407 ORTHO05D005074 1.1e-19 100.9 89 57.3
BcaNung02830 Brassica carinata HOM05D004407 ORTHO05D005074 2.5e-19 99.8 89 58.4
C04p02920 Brassica napus HOM05D004407 ORTHO05D005074 4.3e-19 99.0 89 56.2
BolC4t21933H Brassica oleracea HOM05D004407 ORTHO05D005074 4.3e-19 99.0 89 56.2
C04p02950 Brassica napus HOM05D004407 ORTHO05D005074 9.6e-19 97.8 134 44.8
BolC4t21935H Brassica oleracea HOM05D004407 ORTHO05D005074 9.6e-19 97.8 134 44.8
A05p02480 Brassica napus HOM05D004407 ORTHO05D005074 2.1e-18 96.7 135 43.7
BraA05t19241Z Brassica rapa HOM05D004407 ORTHO05D005074 2.1e-18 96.7 135 43.7
A05p02470 Brassica napus HOM05D004407 ORTHO05D005074 4.8e-18 95.5 89 55.1
BcaNung05649 Brassica carinata HOM05D013829 ORTHO05D015952 6.2e-18 95.1 118 51.7
Thhalv10019315m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 8.1e-18 94.7 129 40.3
BcaNung02832 Brassica carinata HOM05D004407 ORTHO05D005074 1.1e-17 94.4 139 41.7
CARHR148680 Cardamine hirsuta HOM05D013829 ORTHO05D015952 4.0e-17 92.4 160 43.1
Gorai.007G074900 Gossypium raimondii HOM05D004407 ORTHO05D005074 5.3e-17 92.0 132 39.4
Peaxi162Scf00420g00249 Petunia axillaris HOM05D004407 ORTHO05D005074 6.9e-17 91.7 207 38.6
BraA05t19240Z Brassica rapa HOM05D004407 ORTHO05D005074 2.0e-16 90.1 89 52.8
Gohir.A11G065600 Gossypium hirsutum HOM05D004407 ORTHO05D005074 2.6e-16 89.7 210 31.9
A05p02490 Brassica napus HOM05D004407 ORTHO05D005074 4.5e-16 89.0 139 39.6
BraA05t19242Z Brassica rapa HOM05D004407 ORTHO05D005074 4.5e-16 89.0 139 39.6
C04p02940 Brassica napus HOM05D004407 ORTHO05D005074 1.3e-15 87.4 139 39.6
BolC4t21934H Brassica oleracea HOM05D004407 ORTHO05D005074 1.3e-15 87.4 139 39.6
Gohir.D11G069800 Gossypium hirsutum HOM05D004407 ORTHO05D005074 1.1e-14 84.3 209 33.0
Solyc02g067935.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 1.6e-13 80.5 71 54.9
BcaNung02831 Brassica carinata HOM05D004407 ORTHO05D005074 4.6e-13 79.0 124 39.5
SGA_v2.0_scaffold154G37145 Striga asiatica HOM05D002760 ORTHO05D003169 6.0e-13 78.6 48 70.8
Sp4g23980 Schrenkiella parvula HOM05D004407 ORTHO05D005074 1.0e-12 77.8 129 38.8
HPP92_009916 Vanilla planifolia HOM05D004407 ORTHO05D005074 1.8e-12 77.0 157 34.4
SEGI_17639 Sequoiadendron giganteum HOM05D050174 ORTHO05D005074 5.1e-12 75.5 207 33.3
HPP92_009915 Vanilla planifolia HOM05D004407 ORTHO05D005074 6.7e-12 75.1 100 42.0
AT2G41730 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 1.5e-11 73.9 86 50.0
unitig_747.g21864 Utricularia gibba HOM05D004407 ORTHO05D005074 2.5e-11 73.2 131 39.7
Lsat_1_v5_gn_4_184741 Lactuca sativa HOM05D004407 ORTHO05D005074 7.4e-11 71.6 90 47.8
Medtr4g061650 Medicago truncatula HOM05D004407 ORTHO05D005074 2.8e-10 69.7 53 66.0
AL4G40040 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 4.8e-10 68.9 86 46.5
AT5G24640 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 1.8e-09 67.0 86 45.3
ECA232G1846 Erigeron canadensis HOM05D004407 ORTHO05D005074 1.3e-07 60.8 197 29.9
CANSAT64G1789 Cannabis sativa HOM05D004407 ORTHO05D005074 1.7e-07 60.5 147 38.8
AagrBONN_evm.TU.Sc2ySwM_228.3156 Anthoceros agrestis HOM05D018410 ORTHO05D021325 7.1e-06 55.1 71 38.0


User provided reference genes

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