Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 4.2e-113 411.4 209 100.0
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 1.2e-64 250.4 205 67.8
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 6.2e-64 248.1 201 67.2
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 6.2e-64 248.1 207 66.2
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 1.7e-58 229.9 201 63.7
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 5.2e-55 218.4 201 62.7
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 1.2e-54 217.2 192 62.5
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 6.4e-53 211.5 207 59.4
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 7.3e-49 198.0 193 59.1
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 7.3e-49 198.0 193 59.1
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 6.2e-48 194.9 196 58.2
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 8.1e-48 194.5 191 57.1
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 1.1e-47 194.1 196 57.7
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 4.0e-47 192.2 196 57.7
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 4.0e-47 192.2 202 55.9
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 1.2e-46 190.7 191 55.5
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 4.4e-46 188.7 191 55.5
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 7.6e-46 188.0 196 58.2
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 2.1e-43 179.9 191 53.9
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 2.1e-43 179.9 191 53.9
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 8.7e-42 174.5 191 53.9
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 2.4e-39 166.4 190 47.4
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 1.7e-37 160.2 189 50.3
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 1.4e-36 157.1 190 45.3
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 1.4e-36 157.1 202 47.5
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.9e-36 156.8 202 48.0
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 4.2e-36 155.6 198 50.5
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 2.7e-35 152.9 194 46.4
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 2.3e-34 149.8 193 47.2
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 5.1e-34 148.7 161 54.7
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 1.5e-33 147.1 195 46.7
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.3e-32 144.1 199 44.7
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 2.8e-32 142.9 199 44.2
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 4.8e-32 142.1 204 42.2
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 2.4e-31 139.8 198 41.4
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 6.9e-31 138.3 192 45.3
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 2.0e-30 136.7 200 40.5
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 2.6e-30 136.3 188 45.7
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 7.6e-30 134.8 191 41.4
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 1.3e-29 134.0 197 43.7
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 1.3e-29 134.0 190 45.3
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 1.3e-29 134.0 190 41.6
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 2.2e-29 133.3 191 41.9
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 6.4e-29 131.7 192 43.2
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 8.4e-29 131.3 201 41.8
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.1e-28 131.0 191 41.9
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 1.9e-28 130.2 200 44.0
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 1.9e-28 130.2 202 43.1
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 4.2e-28 129.0 194 46.4
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 5.4e-28 128.6 191 41.4
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 5.4e-28 128.6 193 42.5
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 9.3e-28 127.9 193 42.5
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 1.6e-27 127.1 188 45.2
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.6e-27 127.1 200 37.5
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 2.7e-27 126.3 199 41.2
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 3.5e-27 125.9 197 41.6
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 6.0e-27 125.2 194 40.2
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.0e-26 124.4 192 42.2
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 1.0e-26 124.4 200 38.0
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 1.0e-26 124.4 191 42.4
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.3e-26 124.0 200 38.0
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 3.0e-26 122.9 191 41.4
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 6.7e-26 121.7 191 40.3
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 8.7e-26 121.3 199 39.7
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.5e-25 120.6 199 39.7
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 1.5e-25 120.6 193 40.9
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.9e-25 120.2 199 39.7
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 1.9e-25 120.2 188 43.1
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 2.5e-25 119.8 190 38.9
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 2.5e-25 119.8 192 42.2
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 1.3e-24 117.5 194 40.2
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 1.6e-24 117.1 188 42.6
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 2.1e-24 116.7 192 40.6
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 2.1e-24 116.7 192 38.5
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 2.8e-24 116.3 195 39.0
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 2.8e-24 116.3 188 39.4
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 3.7e-24 115.9 193 40.9
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 3.7e-24 115.9 189 40.2
Aa31sc17G60 Aethionema arabicum HOM05D005478 ORTHO05D006426 8.1e-24 114.8 71 85.9
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 5.3e-23 112.1 192 38.0
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 5.3e-23 112.1 192 40.1
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 9.0e-23 111.3 190 37.4
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 1.5e-22 110.5 146 44.5
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 4.5e-22 109.0 192 38.0
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 5.8e-22 108.6 196 39.8
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 1.7e-21 107.1 188 36.7
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 1.7e-21 107.1 192 37.5
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 2.2e-21 106.7 194 33.5
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 2.9e-21 106.3 188 35.1
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 4.9e-21 105.5 192 36.5
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 8.4e-21 104.8 194 36.6
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 1.4e-20 104.0 196 35.7
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 2.5e-20 103.2 189 36.0
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 2.5e-20 103.2 191 38.2
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 7.1e-20 101.7 191 39.3
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 1.2e-19 100.9 195 33.3
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 1.2e-19 100.9 194 36.6
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 1.6e-19 100.5 191 33.5
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 2.1e-19 100.1 192 36.5
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 2.1e-19 100.1 192 32.8
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 2.7e-19 99.8 192 32.8
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 2.7e-19 99.8 192 32.8
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 4.6e-19 99.0 180 36.7
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 7.9e-19 98.2 191 34.6
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 4.3e-17 92.4 188 33.0
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 5.7e-17 92.0 196 34.2
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 5.7e-17 92.0 193 31.6
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 5.7e-17 92.0 189 37.0
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 7.4e-17 91.7 166 38.0
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 9.6e-17 91.3 220 32.7
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 9.6e-17 91.3 213 33.8
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 6.2e-16 88.6 189 33.3
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 2.4e-15 86.7 188 34.0
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 2.4e-15 86.7 195 31.3
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 5.3e-15 85.5 189 33.9
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 5.3e-15 85.5 187 33.2
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 2.6e-14 83.2 189 33.9
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 5.8e-14 82.0 227 31.3
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 2.9e-13 79.7 187 28.9
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 8.4e-13 78.2 187 27.8
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 1.6e-11 73.9 181 29.3
Gohir.D05G130900 Gossypium hirsutum HOM05D005478 ORTHO05D006426 4.8e-08 62.4 111 33.3
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 2.4e-07 60.1 54 55.6
Os02g0595300 Oryza sativa ssp. japonica HOM05D005478 ORTHO05D006426 4.1e-07 59.3 192 24.0
Dinv25725 Davidia involucrata HOM05D005478 ORTHO05D006426 5.3e-07 58.9 90 40.0
Cc07_g01510 Coffea canephora HOM05D005478 ORTHO05D006426 1.5e-06 57.4 93 38.7
Oeu018990.1 Olea europaea HOM05D005478 ORTHO05D006426 3.4e-06 56.2 89 39.3
EL10Ac6g14100 Beta vulgaris HOM05D005478 ORTHO05D006426 4.5e-06 55.8 136 36.0
Lju41C43G9 Lonicera japonica HOM05D005478 ORTHO05D006426 5.9e-06 55.5 100 37.0
Nn3g16214 Nelumbo nucifera HOM05D005478 ORTHO05D006426 7.7e-06 55.1 72 37.5


User provided reference genes

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