Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G4670 Aethionema arabicum HOM05D007214 ORTHO05D008907 2.0e-80 302.8 202 100.0
A06p40570 Brassica napus HOM05D007214 ORTHO05D008907 3.8e-42 175.6 223 56.5
A06p40600 Brassica napus HOM05D007214 ORTHO05D008907 1.4e-41 173.7 223 56.5
BraA06t26979Z Brassica rapa HOM05D007214 ORTHO05D008907 1.4e-41 173.7 223 56.5
Sp2g17170 Schrenkiella parvula HOM05D007214 ORTHO05D008907 4.2e-41 172.2 217 58.1
C07p37400 Brassica napus HOM05D007214 ORTHO05D008907 1.0e-39 167.5 223 56.5
CARHR292610 Cardamine hirsuta HOM05D007214 ORTHO05D008907 1.1e-36 157.5 221 49.3
Carub.0005s0686 Capsella rubella HOM05D007214 ORTHO05D008907 1.8e-36 156.8 217 60.4
AT3G28370 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 2.4e-36 156.4 219 53.9
Thhalv10004882m.g Eutrema salsugineum HOM05D007214 ORTHO05D008907 5.3e-36 155.2 224 60.7
BcaC06g33744 Brassica carinata HOM05D007214 ORTHO05D008907 1.2e-35 154.1 215 56.3
AL5G17980 Arabidopsis lyrata HOM05D007214 ORTHO05D008907 1.7e-34 150.2 219 53.0
BolC7t44250H Brassica oleracea HOM05D007214 ORTHO05D008907 1.7e-34 150.2 226 52.7
BcaC06g30923 Brassica carinata HOM05D007214 ORTHO05D008907 8.4e-34 147.9 222 58.1
BraA06t26977Z Brassica rapa HOM05D007214 ORTHO05D008907 3.1e-28 129.4 223 55.2
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 3.4e-27 125.9 229 39.7
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 4.9e-26 122.1 219 38.4
THA.LOC104805424 Tarenaya hassleriana HOM05D007214 ORTHO05D008907 2.4e-25 119.8 219 55.3
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 5.4e-25 118.6 223 38.1
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 1.2e-24 117.5 224 37.1
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 2.3e-23 113.2 224 45.5
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 1.9e-22 110.2 219 38.4
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 1.5e-19 100.5 218 35.8
AUR62030556 Chenopodium quinoa HOM05D007214 ORTHO05D008907 2.2e-18 96.7 201 36.8
CSS0043780 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 2.9e-18 96.3 200 34.5
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 2.9e-18 96.3 223 39.5
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 2.9e-18 96.3 224 34.8
Aqoxy3G00863 Aquilegia oxysepala HOM05D007214 ORTHO05D008907 2.5e-17 93.2 221 35.3
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 2.5e-17 93.2 218 31.7
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 2.5e-17 93.2 226 31.9
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 7.9e-16 88.2 261 29.9
Gorai.001G258300 Gossypium raimondii HOM05D007214 ORTHO05D008907 1.8e-15 87.0 221 44.8
Gohir.A07G216951 Gossypium hirsutum HOM05D007214 ORTHO05D008907 3.9e-15 85.9 208 42.8
RcHm_v2.0_Chr2g0169771 Rosa chinensis HOM05D007214 ORTHO05D008907 3.9e-15 85.9 224 42.9
Solyc02g087420.3 Solanum lycopersicum HOM05D007214 ORTHO05D008907 3.9e-15 85.9 222 36.5
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 6.7e-15 85.1 220 29.5
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 6.7e-15 85.1 221 30.8
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 1.9e-14 83.6 221 32.1
Sabra16G0229500 Salix brachista HOM05D007214 ORTHO05D008907 7.4e-14 81.6 211 34.1
Sopen02g032170 Solanum pennellii HOM05D007214 ORTHO05D008907 1.3e-13 80.9 222 34.2
Peaxi162Scf00129g00734 Petunia axillaris HOM05D007214 ORTHO05D008907 2.8e-13 79.7 227 29.5
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 4.8e-13 79.0 227 29.5
CSS0027558 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 9.0e-12 74.7 200 30.0
TWI12G0421 Tripterygium wilfordii HOM05D007214 ORTHO05D008907 9.0e-12 74.7 219 43.8
Sc11g0006840 Simmondsia chinensis HOM05D007214 ORTHO05D008907 1.2e-11 74.3 101 43.6
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 1.2e-11 74.3 220 29.5
FAN14G2712 Fragaria x ananassa HOM05D007214 ORTHO05D008907 2.0e-11 73.6 224 41.1
MD09G1042000 Malus domestica HOM05D007214 ORTHO05D008907 2.0e-11 73.6 223 42.2
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 3.4e-11 72.8 217 30.4
AT1G51430 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 5.8e-11 72.0 154 37.7
Manes.17G117300 Manihot esculenta HOM05D007214 ORTHO05D008907 1.0e-10 71.2 150 38.0
Prupe.3G275800 Prunus persica HOM05D007214 ORTHO05D008907 1.0e-10 71.2 223 40.8
MBI15_g38192_MAGBIO Magnolia biondii HOM05D007214 ORTHO05D008907 1.3e-10 70.9 102 42.2
QL02p079285 Quercus lobata HOM05D007214 ORTHO05D008907 1.3e-10 70.9 236 42.4
FvH4_6g49740 Fragaria vesca HOM05D007214 ORTHO05D008907 2.2e-10 70.1 221 41.2
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 3.8e-10 69.3 227 30.0
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 8.4e-10 68.2 226 30.1
Atru.chr8.2432 Acer truncatum HOM05D007214 ORTHO05D008907 1.9e-09 67.0 105 41.9
GSVIVG01032574001 Vitis vinifera HOM05D007214 ORTHO05D008907 2.5e-09 66.6 103 59.2
Dinv33685 Davidia involucrata HOM05D007214 ORTHO05D008907 3.2e-09 66.2 228 31.1
Cpa.g.sc14.68 Carica papaya HOM05D007214 ORTHO05D008907 5.5e-09 65.5 145 35.2
Sabra17G0063300 Salix brachista HOM05D007214 ORTHO05D008907 2.7e-08 63.2 61 54.1
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 3.5e-08 62.8 231 26.8
TPR.G39121 Trifolium pratense HOM05D007214 ORTHO05D008907 3.5e-08 62.8 239 25.1
Ah.12g065280 Amaranthus hybridus HOM05D007214 ORTHO05D008907 1.0e-07 61.2 201 31.3
Gohir.D07G223900 Gossypium hirsutum HOM05D007214 ORTHO05D008907 1.0e-07 61.2 189 44.4
DCAR_011179 Daucus carota HOM05D007214 ORTHO05D008907 1.8e-07 60.5 177 27.7
Zm00001eb280040 Zea mays HOM05D007214 ORTHO05D008907 6.7e-07 58.5 222 26.6
Oeu060589.1 Olea europaea HOM05D007214 ORTHO05D008907 8.7e-07 58.2 85 70.6
FAN05G0748 Fragaria x ananassa HOM05D007214 ORTHO05D008907 5.7e-06 55.5 61 50.8
COL.COLO4_36999 Corchorus olitorius HOM05D007214 ORTHO05D008907 7.4e-06 55.1 205 44.4


User provided reference genes

Program Settings