Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G4530 Aethionema arabicum HOM05D005719 ORTHO05D007030 7.2e-265 916.8 487 100.0
Sp2g17320 Schrenkiella parvula HOM05D005719 ORTHO05D007030 1.5e-209 733.0 492 79.3
CARHR286650 Cardamine hirsuta HOM05D005719 ORTHO05D007030 1.6e-208 729.6 493 79.5
Thhalv10004086m.g Eutrema salsugineum HOM05D005719 ORTHO05D007030 1.6e-208 729.6 491 78.6
AT3G28670 Arabidopsis thaliana HOM05D005719 ORTHO05D007030 8.9e-207 723.8 492 78.7
AL5G18300 Arabidopsis lyrata HOM05D005719 ORTHO05D007030 1.3e-205 719.9 491 77.2
BcaC06g30902 Brassica carinata HOM05D005719 ORTHO05D007030 2.2e-205 719.2 489 76.7
BcaC06g33632 Brassica carinata HOM05D005719 ORTHO05D007030 4.3e-201 704.9 490 77.8
C07p37630 Brassica napus HOM05D005719 ORTHO05D007030 1.2e-200 703.4 490 77.8
BolC7t44279H Brassica oleracea HOM05D005719 ORTHO05D007030 3.1e-199 698.7 491 77.6
Carub.0005s0719 Capsella rubella HOM05D005719 ORTHO05D007030 6.8e-199 697.6 491 75.4
A06p40410 Brassica napus HOM05D005719 ORTHO05D007030 1.2e-198 696.8 492 76.4
BraA06t26959Z Brassica rapa HOM05D005719 ORTHO05D007030 1.2e-198 696.8 492 76.4
THA.LOC104805699 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 1.3e-173 613.6 490 66.1
THA.LOC104823811 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 2.1e-171 606.3 492 65.4
Gohir.A05G217800 Gossypium hirsutum HOM05D005719 ORTHO05D007030 3.4e-150 535.8 491 58.9
Duzib093G1837 Durio zibethinus HOM05D005719 ORTHO05D007030 1.7e-149 533.5 486 58.8
Sabra02G0085500 Salix brachista HOM05D005719 ORTHO05D007030 5.0e-149 531.9 495 57.4
Gorai.009G226700 Gossypium raimondii HOM05D005719 ORTHO05D007030 3.2e-148 529.3 491 58.2
Thecc.08G076500 Theobroma cacao HOM05D005719 ORTHO05D007030 1.6e-147 526.9 491 58.2
Gohir.D05G219700 Gossypium hirsutum HOM05D005719 ORTHO05D007030 3.6e-147 525.8 491 58.5
MD15G1392600 Malus domestica HOM05D005719 ORTHO05D007030 3.6e-147 525.8 493 56.4
MD08G1208600 Malus domestica HOM05D005719 ORTHO05D007030 4.7e-147 525.4 496 56.7
TWI56G1147 Tripterygium wilfordii HOM05D005719 ORTHO05D007030 5.2e-146 521.9 491 57.4
CiPaw.07G161600 Carya illinoinensis HOM05D005719 ORTHO05D007030 2.6e-145 519.6 455 60.2
Prupe.1G540100 Prunus persica HOM05D005719 ORTHO05D007030 2.6e-145 519.6 493 56.0
Manes.18G055200 Manihot esculenta HOM05D005719 ORTHO05D007030 1.3e-144 517.3 497 55.3
GSVIVG01009231001 Vitis vinifera HOM05D005719 ORTHO05D007030 1.1e-143 514.2 432 62.3
CiPaw.08G058000 Carya illinoinensis HOM05D005719 ORTHO05D007030 1.4e-143 513.8 486 55.8
Cpa.g.sc177.3 Carica papaya HOM05D005719 ORTHO05D007030 5.3e-143 511.9 415 64.3
CANSAT21G2028 Cannabis sativa HOM05D005719 ORTHO05D007030 7.0e-143 511.5 487 56.1
vmacro04622 Vaccinium macrocarpon HOM05D005719 ORTHO05D007030 1.9e-140 503.4 491 54.4
Haze_22505 Corylus avellana HOM05D005719 ORTHO05D007030 2.5e-140 503.1 514 54.1
QL12p040011 Quercus lobata HOM05D005719 ORTHO05D007030 1.2e-139 500.7 497 58.6
RcHm_v2.0_Chr7g0233191 Rosa chinensis HOM05D005719 ORTHO05D007030 1.6e-139 500.4 497 54.9
Ciclev10000979m.g Citrus clementina HOM05D005719 ORTHO05D007030 2.1e-139 500.0 493 54.6
CSS0009932 Camellia sinensis var. sinensis HOM05D005719 ORTHO05D007030 1.8e-138 496.9 495 55.6
Hma1.2p1_0010F.1_g006360 Hydrangea macrophylla HOM05D005719 ORTHO05D007030 2.0e-137 493.4 485 54.8
Cfa013832 Carpinus fangiana HOM05D000446 ORTHO05D000321 3.3e-137 492.7 459 57.3
TAR628G1450 Trochodendron aralioides HOM05D005719 ORTHO05D007030 5.7e-137 491.9 489 55.8
Glyma.06G092200 Glycine max HOM05D005719 ORTHO05D007030 2.2e-136 490.0 485 53.8
Actinidia19605 Actinidia chinensis HOM05D005719 ORTHO05D007030 5.3e-135 485.3 487 53.4
FvH4_5g33860 Fragaria vesca HOM05D005719 ORTHO05D007030 5.3e-135 485.3 461 55.3
Sc02g0008400 Simmondsia chinensis HOM05D005719 ORTHO05D007030 7.7e-134 481.5 495 51.9
arahy.Tifrunner.gnm1.ann1.SLT0HR Arachis hypogaea HOM05D005719 ORTHO05D007030 6.5e-133 478.4 485 53.0
EL10Ac1g02246 Beta vulgaris HOM05D005719 ORTHO05D007030 1.6e-131 473.8 490 51.6
Psat5g018640 Pisum sativum HOM05D005719 ORTHO05D007030 2.7e-131 473.0 486 52.1
arahy.Tifrunner.gnm1.ann1.I1WLRD Arachis hypogaea HOM05D005719 ORTHO05D007030 3.6e-131 472.6 485 52.6
TPR.G12418 Trifolium pratense HOM05D005719 ORTHO05D007030 4.7e-131 472.2 486 52.3
TAR381G0820 Trochodendron aralioides HOM05D005719 ORTHO05D007030 6.1e-131 471.9 439 57.4
Lalb_Chr11g0064791 Lupinus albus HOM05D005719 ORTHO05D007030 8.0e-131 471.5 484 52.5
Phvul.009G145500 Phaseolus vulgaris HOM05D005719 ORTHO05D007030 1.4e-130 470.7 488 51.6
ClCG11G014800 Citrullus lanatus HOM05D005719 ORTHO05D007030 2.3e-130 469.9 484 53.5
PSO700G0171 Papaver somniferum HOM05D005719 ORTHO05D007030 4.0e-130 469.2 459 54.0
Atru.chr13.942 Acer truncatum HOM05D005719 ORTHO05D007030 6.8e-130 468.4 491 53.2
COL.COLO4_35322 Corchorus olitorius HOM05D005719 ORTHO05D007030 8.8e-130 468.0 486 54.7
Eucgr.F02170 Eucalyptus grandis HOM05D005719 ORTHO05D007030 1.2e-129 467.6 487 53.8
PGR031G2819 Punica granatum HOM05D005719 ORTHO05D007030 1.2e-129 467.6 485 52.2
PSO761G0268 Papaver somniferum HOM05D005719 ORTHO05D007030 2.0e-129 466.8 446 55.2
Sed0009724 Sechium edule HOM05D005719 ORTHO05D007030 2.0e-129 466.8 435 58.2
CsaV3_3G048210 Cucumis sativus L. HOM05D005719 ORTHO05D007030 5.7e-129 465.3 484 52.9
Lj1g0010479 Lotus japonicus HOM05D005719 ORTHO05D007030 5.7e-129 465.3 485 52.4
ECA240G4523 Erigeron canadensis HOM05D005719 ORTHO05D007030 1.3e-128 464.2 496 51.8
HanXRQChr03g0065451 Helianthus annuus HOM05D005719 ORTHO05D007030 1.3e-128 464.2 488 52.9
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 1.7e-128 463.8 436 56.0
Glyma.04G090400 Glycine max HOM05D005719 ORTHO05D007030 2.2e-128 463.4 488 52.3
Medtr3g111330 Medicago truncatula HOM05D005719 ORTHO05D007030 2.2e-128 463.4 507 50.3
Migut.C00296 Erythranthe guttata HOM05D005719 ORTHO05D007030 6.3e-128 461.8 493 50.1
Hund05222 Selenicereus undatus HOM05D005719 ORTHO05D007030 4.1e-127 459.1 495 51.3
Duzib041G0544 Durio zibethinus HOM05D005719 ORTHO05D007030 7.0e-127 458.4 491 52.7
Cc10_g08220 Coffea canephora HOM05D005719 ORTHO05D007030 1.2e-126 457.6 446 54.0
FAN08G1402 Fragaria x ananassa HOM05D005719 ORTHO05D007030 5.9e-126 455.3 529 48.0
Lsat_1_v5_gn_7_55820 Lactuca sativa HOM05D005719 ORTHO05D007030 1.7e-125 453.8 507 50.7
Oeu035376.1 Olea europaea HOM05D005719 ORTHO05D007030 7.2e-124 448.4 487 49.1
MBI16_g44752_MAGBIO Magnolia biondii HOM05D005719 ORTHO05D007030 2.8e-123 446.4 438 55.3
VMungo1309G0989 Vigna mungo HOM05D005719 ORTHO05D007030 8.0e-123 444.9 458 52.0
TPR.G21947 Trifolium pratense HOM05D005719 ORTHO05D007030 4.4e-121 439.1 456 52.2
MSTRG.25002 Avicennia marina HOM05D005719 ORTHO05D007030 4.9e-120 435.6 492 48.6
Nitab4.5_0001608g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 1.4e-119 434.1 494 50.2
FAN18G0583 Fragaria x ananassa HOM05D005719 ORTHO05D007030 3.5e-118 429.5 423 54.6
Sopen02g003330 Solanum pennellii HOM05D005719 ORTHO05D007030 1.3e-117 427.6 491 48.5
Solyc02g014380.3 Solanum lycopersicum HOM05D005719 ORTHO05D007030 5.0e-117 425.6 491 48.3
SGA_v2.0_scaffold14G07072 Striga asiatica HOM05D005719 ORTHO05D007030 4.9e-112 409.1 483 46.8
Manes.05G187400 Manihot esculenta HOM05D005719 ORTHO05D007030 2.3e-109 400.2 391 55.0
CAN.G1751.8 Capsicum annuum HOM05D005719 ORTHO05D007030 3.0e-109 399.8 425 52.0
AUR62035419 Chenopodium quinoa HOM05D005719 ORTHO05D007030 3.9e-109 399.4 544 44.7
Dinv44886 Davidia involucrata HOM05D005719 ORTHO05D007030 3.9e-109 399.4 394 55.8
unitig_749.g13864 Utricularia gibba HOM05D005719 ORTHO05D000442 1.9e-108 397.1 494 45.1
Nn1g05685 Nelumbo nucifera HOM05D005719 ORTHO05D007030 5.6e-108 395.6 490 48.4
Rhsim07G0214600 Rhododendron simsii HOM05D005719 ORTHO05D007030 2.8e-107 393.3 357 58.3
HPP92_028121 Vanilla planifolia HOM05D005719 ORTHO05D007030 6.2e-107 392.1 435 47.4
HPP92_020868 Vanilla planifolia HOM05D005719 ORTHO05D007030 3.1e-106 389.8 435 47.4
Ca_15541_v3 Cicer arietinum L. HOM05D005719 ORTHO05D007030 3.4e-105 386.3 484 46.3
MELO3C003498.2 Cucumis melo HOM05D005719 ORTHO05D007030 4.1e-103 379.4 330 59.4
Nitab4.5_0000681g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 1.6e-102 377.5 491 47.0
CAN.G1921.11 Capsicum annuum HOM05D005719 ORTHO05D007030 1.6e-99 367.5 441 47.6
Peaxi162Scf01397g00011 Petunia axillaris HOM05D005719 ORTHO05D007030 1.1e-98 364.8 357 56.0
PGSC0003DMG400019103 Solanum tuberosum HOM05D005719 ORTHO05D007030 3.9e-93 346.3 489 43.8
Ah.00g000110 Amaranthus hybridus HOM05D005719 ORTHO05D007030 5.1e-93 345.9 398 47.7
CDE07G0720 Ceratophyllum demersum HOM05D005719 ORTHO05D007030 9.5e-92 341.7 434 43.5
Os08g0101400 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 9.9e-89 331.6 434 42.6
SalBow7G1913 Salvia bowleyana HOM05D005719 ORTHO05D007030 9.2e-87 325.1 397 48.9
BcaB04g19478 Brassica carinata HOM05D005719 ORTHO05D007030 1.8e-82 310.8 281 64.1
Potri.002G108700 Populus trichocarpa HOM05D005719 ORTHO05D007030 1.5e-81 307.8 250 62.8
Actinidia29649 Actinidia chinensis HOM05D005719 ORTHO05D007030 6.9e-74 282.3 350 48.3
Pp3c26_6510 Physcomitrium patens HOM05D005719 ORTHO05D007030 2.7e-70 270.4 501 35.3
Mapoly0053s0027 Marchantia polymorpha HOM05D005719 ORTHO05D007030 2.3e-69 267.3 427 37.9
PGSC0003DMG400019007 Solanum tuberosum HOM05D005719 ORTHO05D007030 1.6e-67 261.2 492 37.6
Os10g0188900 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 6.2e-59 232.6 273 46.2
TAR381G1016 Trochodendron aralioides HOM05D005719 ORTHO05D007030 4.9e-56 223.0 185 61.6
Lju279A4T8 Lonicera japonica HOM05D005719 ORTHO05D007030 2.2e-51 207.6 171 60.8
SMO118G0237 Selaginella moellendorffii HOM05D005719 ORTHO05D007030 4.8e-51 206.5 440 35.2
Zm00001eb198670 Zea mays HOM05D005719 ORTHO05D007030 4.8e-51 206.5 278 42.8
AUR62035705 Chenopodium quinoa HOM05D005719 ORTHO05D007030 2.9e-48 197.2 233 46.4
HanXRQChr16g0499811 Helianthus annuus HOM05D005719 ORTHO05D007030 4.2e-47 193.4 339 39.5
TAR381G0292 Trochodendron aralioides HOM05D005719 ORTHO05D007030 9.7e-44 182.2 187 56.1
AUR62035707 Chenopodium quinoa HOM05D005719 ORTHO05D007030 5.0e-40 169.9 142 62.7
Duzib116G0315 Durio zibethinus HOM05D005719 ORTHO05D007030 1.6e-38 164.9 135 61.5
AagrBONN_evm.TU.Sc2ySwM_369.438 Anthoceros agrestis HOM05D005719 ORTHO05D007030 6.7e-37 159.5 260 37.3
ATR0144G003 Amborella trichopoda HOM05D005719 ORTHO05D007030 2.6e-36 157.5 189 49.7
Lju170A15T23 Lonicera japonica HOM05D005719 ORTHO05D007030 8.2e-35 152.5 108 65.7
CBR_g38241 Chara braunii HOM05D005719 ORTHO05D007030 1.4e-34 151.8 380 29.5
ATR0800G070 Amborella trichopoda HOM05D005719 ORTHO05D007030 3.6e-30 137.1 127 53.5
Hund16029 Selenicereus undatus HOM05D005719 ORTHO05D007030 3.9e-29 133.7 233 36.9
SEGI_36882 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 7.7e-25 119.4 140 49.3
Oeu035375.1 Olea europaea HOM05D005719 ORTHO05D007030 2.7e-22 110.9 171 38.0
Lju170A15T24 Lonicera japonica HOM05D005719 ORTHO05D007030 4.7e-22 110.2 109 57.8
COL.COLO4_23153 Corchorus olitorius HOM05D005719 ORTHO05D007030 6.7e-21 106.3 164 45.1
C05p32060 Brassica napus HOM05D005719 ORTHO05D007030 3.2e-15 87.4 87 69.0
BolC5t31933H Brassica oleracea HOM05D005719 ORTHO05D007030 3.2e-15 87.4 87 69.0
Cre12.g551000 Chlamydomonas reinhardtii HOM05D005719 ORTHO05D007030 1.2e-14 85.5 408 23.5
Peaxi162Scf01397g00010 Petunia axillaris HOM05D005719 ORTHO05D007030 6.8e-13 79.7 129 35.7
SEGI_23985 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 9.1e-10 69.3 107 36.4
Lju279C4T1 Lonicera japonica HOM05D005719 ORTHO05D007030 2.7e-09 67.8 109 41.3


User provided reference genes

Program Settings