Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G4480 Aethionema arabicum HOM05D011134 ORTHO05D012144 1.6e-134 483.4 382 100.0
Sp2g17400 Schrenkiella parvula HOM05D011134 ORTHO05D012144 1.3e-43 181.4 188 53.7
BolC7t44286H Brassica oleracea HOM05D011134 ORTHO05D012144 4.6e-41 172.9 196 48.5
BcaC06g33638 Brassica carinata HOM05D011134 ORTHO05D012144 6.0e-41 172.6 196 48.5
C07p37690 Brassica napus HOM05D011134 ORTHO05D012144 6.0e-41 172.6 197 48.2
A06p40360 Brassica napus HOM05D011134 ORTHO05D012144 1.1e-39 168.3 196 48.0
BraA06t26954Z Brassica rapa HOM05D011134 ORTHO05D012144 1.1e-39 168.3 196 48.0
CARHR151750 Cardamine hirsuta HOM05D011134 ORTHO05D012144 7.4e-39 165.6 188 50.0
BcaB04g19482 Brassica carinata HOM05D011134 ORTHO05D012144 4.8e-38 162.9 188 48.4
AL5G18480 Arabidopsis lyrata HOM05D011134 ORTHO05D012144 6.2e-38 162.5 206 44.7
AT3G28750 Arabidopsis thaliana HOM05D011134 ORTHO05D012144 3.1e-37 160.2 188 45.2
AT5G39880 Arabidopsis thaliana HOM05D010681 ORTHO05D014389 1.2e-36 158.3 210 44.3
AL7G50260 Arabidopsis lyrata HOM05D010681 ORTHO05D014389 6.4e-35 152.5 215 42.3
Carub.0007s3584 Capsella rubella HOM05D010681 ORTHO05D014389 8.4e-35 152.1 200 44.0
Thhalv10027713m.g Eutrema salsugineum HOM05D010681 ORTHO05D014389 1.4e-34 151.4 201 45.8
BcaC06g30897 Brassica carinata HOM05D011134 ORTHO05D012144 2.1e-33 147.5 196 42.9
CARHR262300 Cardamine hirsuta HOM05D010681 ORTHO05D014389 1.0e-32 145.2 193 43.0
C09p03970 Brassica napus HOM05D011134 ORTHO05D012144 1.1e-31 141.7 188 42.6
BolC9t53329H Brassica oleracea HOM05D011134 ORTHO05D012144 1.1e-31 141.7 188 42.6
BraA09t36015Z Brassica rapa HOM05D011134 ORTHO05D012144 3.3e-31 140.2 188 42.6
A09p03770 Brassica napus HOM05D011134 ORTHO05D012144 4.3e-31 139.8 188 42.6
BcaC04g23864 Brassica carinata HOM05D011134 ORTHO05D012144 5.6e-31 139.4 188 42.6
Sp7g02160 Schrenkiella parvula HOM05D010681 ORTHO05D014389 9.6e-31 138.7 206 41.7
Carub.0005s0730 Capsella rubella HOM05D011134 ORTHO05D012144 1.3e-27 128.3 189 43.9
THA.LOC104808338 Tarenaya hassleriana HOM05D010681 ORTHO05D012144 1.0e-24 118.6 213 37.1
THA.LOC104808339 Tarenaya hassleriana HOM05D010681 ORTHO05D012144 1.0e-24 118.6 213 37.1
THA.LOC104808337 Tarenaya hassleriana HOM05D010681 ORTHO05D012144 1.8e-24 117.9 213 37.1
THA.LOC104808340 Tarenaya hassleriana HOM05D010681 ORTHO05D012144 5.1e-24 116.3 213 37.1
BcaB02g07963 Brassica carinata HOM05D010681 ORTHO05D014389 8.7e-24 115.5 201 38.3
THA.LOC104805451 Tarenaya hassleriana HOM05D010681 ORTHO05D012144 1.1e-23 115.2 206 38.3
BcaB02g07967 Brassica carinata HOM05D010681 ORTHO05D014389 1.9e-23 114.4 201 37.8
A04p13910 Brassica napus HOM05D010681 ORTHO05D014389 1.6e-22 111.3 201 37.8
BraA04t17056Z Brassica rapa HOM05D010681 ORTHO05D014389 1.6e-22 111.3 201 37.8
BcaB02g07964 Brassica carinata HOM05D010681 ORTHO05D014389 2.1e-22 110.9 201 37.3
BcaC02g08998 Brassica carinata HOM05D010681 ORTHO05D014389 2.1e-22 110.9 201 37.8
C04p47670 Brassica napus HOM05D010681 ORTHO05D014389 2.1e-22 110.9 199 37.7
BolC4t26368H Brassica oleracea HOM05D010681 ORTHO05D014389 2.1e-22 110.9 201 37.8
THA.LOC104823932 Tarenaya hassleriana HOM05D010681 ORTHO05D012144 2.1e-22 110.9 216 38.9


User provided reference genes

Program Settings