Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G4400 Aethionema arabicum HOM05D008352 ORTHO05D011361 1.1e-190 670.6 604 100.0
Sp2g17870 Schrenkiella parvula HOM05D008352 ORTHO05D011361 3.3e-86 323.6 579 52.8
Carub.0005s0757 Capsella rubella HOM05D008352 ORTHO05D011361 9.1e-84 315.5 583 43.2
Carub.0005s0735 Capsella rubella HOM05D008352 ORTHO05D011361 1.2e-83 315.1 580 53.8
Thhalv10004155m.g Eutrema salsugineum HOM05D008352 ORTHO05D011361 1.2e-83 315.1 579 50.6
AL5G18540 Arabidopsis lyrata HOM05D008352 ORTHO05D011361 7.7e-83 312.4 579 47.7
AT3G28810 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 5.5e-81 306.2 579 47.2
CARHR152080 Cardamine hirsuta HOM05D008352 ORTHO05D011361 2.7e-80 303.9 579 41.3
AL5G18840 Arabidopsis lyrata HOM05D008352 ORTHO05D011361 3.9e-79 300.1 578 50.3
AT3G28820 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 1.5e-78 298.1 579 46.5
AT3G28980 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 5.3e-76 289.7 579 42.5
Sp1g26250 Schrenkiella parvula HOM05D008352 ORTHO05D011361 2.9e-74 283.9 580 47.8
BraA09t39127Z Brassica rapa HOM05D008352 ORTHO05D011361 4.5e-67 260.0 582 42.6
A09p36020 Brassica napus HOM05D008352 ORTHO05D011361 7.7e-67 259.2 584 42.8
A08p24470 Brassica napus HOM05D008352 ORTHO05D011361 4.2e-65 253.4 582 41.9
BraA08t34403Z Brassica rapa HOM05D008352 ORTHO05D011361 7.2e-65 252.7 582 41.1
BcaB07g32652 Brassica carinata HOM05D008352 ORTHO05D011361 2.7e-64 250.8 582 40.4
BolC5t31669H Brassica oleracea HOM05D008352 ORTHO05D011361 1.0e-63 248.8 582 40.7
C05p29370 Brassica napus HOM05D008352 ORTHO05D011361 1.8e-63 248.1 582 46.0
BcaB07g32675 Brassica carinata HOM05D008352 ORTHO05D011361 2.3e-63 247.7 582 46.2
THA.LOC104823934 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 2.8e-48 197.6 585 29.9
AL7G50270 Arabidopsis lyrata HOM05D008352 ORTHO05D014403 5.8e-46 189.9 204 52.5
BcaC01g00190 Brassica carinata HOM05D008352 ORTHO05D011361 5.8e-46 189.9 584 35.3
AT5G39870 Arabidopsis thaliana HOM05D008352 ORTHO05D014403 7.5e-46 189.5 198 54.0
THA.LOC104805455 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 8.3e-45 186.0 586 38.7
THA.LOC104800047 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 1.4e-44 185.3 586 38.7
THA.LOC104805452 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 1.4e-44 185.3 586 38.7
CARHR262310 Cardamine hirsuta HOM05D008352 ORTHO05D014403 1.9e-44 184.9 206 50.5
Sp7g02170 Schrenkiella parvula HOM05D008352 ORTHO05D014403 3.6e-40 170.6 204 48.0
Carub.0007s3585 Capsella rubella HOM05D008352 ORTHO05D014403 2.6e-38 164.5 190 47.9
BcaNung06844 Brassica carinata HOM05D008352 ORTHO05D011361 7.1e-36 156.4 539 36.2
BcaB06g27388 Brassica carinata HOM05D008352 ORTHO05D014403 6.0e-35 153.3 189 48.1
Thhalv10003856m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 5.1e-34 150.2 148 60.1
BcaB06g27386 Brassica carinata HOM05D008352 ORTHO05D014403 4.3e-33 147.1 203 43.8
C07p38160 Brassica napus HOM05D008352 ORTHO05D011361 4.3e-33 147.1 150 58.0
A04p12630 Brassica napus HOM05D008352 ORTHO05D014403 7.3e-33 146.4 202 45.0
BraA04t16920Z Brassica rapa HOM05D008352 ORTHO05D014403 7.3e-33 146.4 202 45.0
C04p46350 Brassica napus HOM05D008352 ORTHO05D014403 3.6e-32 144.1 190 45.8
BolC4t26221H Brassica oleracea HOM05D008352 ORTHO05D014403 3.6e-32 144.1 190 45.8
BolC7t44338H Brassica oleracea HOM05D008352 ORTHO05D011361 3.6e-32 144.1 149 57.0
A06p40010 Brassica napus HOM05D008352 ORTHO05D011361 1.4e-31 142.1 149 56.4
BraA06t26916Z Brassica rapa HOM05D008352 ORTHO05D011361 1.4e-31 142.1 149 56.4
C03p76750 Brassica napus HOM05D008352 ORTHO05D011361 1.8e-31 141.7 490 33.5
Sp2g17440 Schrenkiella parvula HOM05D007461 ORTHO05D011250 1.7e-29 135.2 146 56.2
THA.LOC104823935 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 3.7e-29 134.0 197 43.1
Carub.0005s0734 Capsella rubella HOM05D007461 ORTHO05D011250 4.9e-29 133.7 146 56.2
AL5G18530 Arabidopsis lyrata HOM05D008352 ORTHO05D011250 1.2e-27 129.0 138 58.7
BcaB04g19484 Brassica carinata HOM05D007461 ORTHO05D011250 2.1e-27 128.3 148 51.4
THA.LOC104823938 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 1.1e-25 122.5 196 39.8
A09p03780 Brassica napus HOM05D007461 ORTHO05D011250 1.9e-25 121.7 150 48.7
Aa31LG6G10300 Aethionema arabicum HOM05D007461 ORTHO05D011250 1.6e-24 118.6 148 49.3
BcaC04g23863 Brassica carinata HOM05D007461 ORTHO05D011250 6.2e-24 116.7 144 49.3
AL5G18560 Arabidopsis lyrata HOM05D007461 ORTHO05D011250 1.4e-23 115.5 146 48.6
Carub.0005s0737 Capsella rubella HOM05D007461 ORTHO05D011250 2.4e-23 114.8 141 51.8
Thhalv10003975m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 2.4e-23 114.8 148 48.0
AT3G28830 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 8.9e-23 112.8 146 47.9
THA.LOC104823936 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 1.5e-22 112.1 196 35.7
THA.LOC104808023 Tarenaya hassleriana HOM05D011893 ORTHO05D013967 2.0e-22 111.7 202 35.6
Sp2g17450 Schrenkiella parvula HOM05D007461 ORTHO05D011250 3.4e-22 110.9 146 47.9
C09p03980 Brassica napus HOM05D007461 ORTHO05D011250 1.7e-21 108.6 137 48.9
BolC9t53330H Brassica oleracea HOM05D007461 ORTHO05D011250 1.7e-21 108.6 137 48.9
CARHR151820 Cardamine hirsuta HOM05D007461 ORTHO05D011250 3.2e-20 104.4 91 63.7
Carub.0005s0732 Capsella rubella HOM05D011893 ORTHO05D013967 5.4e-20 103.6 150 43.3
A06p40340 Brassica napus HOM05D007461 ORTHO05D011250 7.1e-20 103.2 146 45.9
BraA06t26951Z Brassica rapa HOM05D007461 ORTHO05D011250 7.1e-20 103.2 146 45.9
AT3G28770 Arabidopsis thaliana HOM05D011893 ORTHO05D013967 9.3e-20 102.8 150 43.3
AL5G18500 Arabidopsis lyrata HOM05D011893 ORTHO05D013967 2.1e-19 101.7 149 43.6
BcaC03g17532 Brassica carinata HOM05D007461 ORTHO05D011250 3.5e-19 100.9 150 42.0
BolC2t11559H Brassica oleracea HOM05D007461 ORTHO05D011250 3.5e-19 100.9 150 42.0
C02p55020 Brassica napus HOM05D007461 ORTHO05D011250 1.3e-18 99.0 150 41.3
Aa31LG2G4440 Aethionema arabicum HOM05D011893 ORTHO05D013967 1.7e-18 98.6 149 40.9
BraA09t36016Z Brassica rapa HOM05D007461 ORTHO05D011250 2.3e-18 98.2 125 48.8
BcaC03g17528 Brassica carinata HOM05D011893 ORTHO05D013967 5.1e-18 97.1 150 42.7
BolC2t11550H Brassica oleracea HOM05D011893 ORTHO05D013967 5.1e-18 97.1 150 42.7
AT5G48575 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 6.6e-18 96.7 99 58.6
BolC7t44289H Brassica oleracea HOM05D007461 ORTHO05D011250 1.1e-17 95.9 139 45.3
BcaC06g33642 Brassica carinata HOM05D007461 ORTHO05D011250 1.5e-17 95.5 139 45.3
A02p36080 Brassica napus HOM05D007461 ORTHO05D011250 1.5e-17 95.5 150 40.0
BraA02t08608Z Brassica rapa HOM05D007461 ORTHO05D011250 1.5e-17 95.5 150 40.0
BcaC06g30894 Brassica carinata HOM05D007461 ORTHO05D011250 2.5e-17 94.7 129 49.6
C02p54900 Brassica napus HOM05D011893 ORTHO05D013967 2.5e-17 94.7 150 41.3
A02p36060 Brassica napus HOM05D011893 ORTHO05D013967 5.6e-17 93.6 146 42.5
BraA02t08605Z Brassica rapa HOM05D011893 ORTHO05D013967 5.6e-17 93.6 146 42.5
BcaB07g30118 Brassica carinata HOM05D011893 ORTHO05D013967 2.1e-16 91.7 150 40.7
SpUn0298_0010 Schrenkiella parvula HOM05D011893 ORTHO05D013967 6.2e-16 90.1 141 42.6
BraA02t08642Z Brassica rapa HOM05D008352 ORTHO05D024480 4.0e-15 87.4 115 48.7
BraA02t08646Z Brassica rapa HOM05D008352 ORTHO05D026834 6.9e-15 86.7 135 42.2
C07p37710 Brassica napus HOM05D007461 ORTHO05D011250 2.6e-14 84.7 125 45.6
Aa31LG2G4410 Aethionema arabicum HOM05D007461 ORTHO05D011250 9.9e-14 82.8 148 41.9
Sp2g17420 Schrenkiella parvula HOM05D011893 ORTHO05D013967 1.7e-13 82.0 188 29.3
A02p36470 Brassica napus HOM05D008352 ORTHO05D024480 8.4e-13 79.7 109 47.7
Thhalv10005404m.g Eutrema salsugineum HOM05D011893 ORTHO05D013967 3.2e-12 77.8 194 26.8
Thhalv10009470m.g Eutrema salsugineum HOM05D008352 ORTHO05D011361 7.1e-12 76.6 153 42.5
AL8G21560 Arabidopsis lyrata HOM05D008352 ORTHO05D026834 1.2e-11 75.9 60 60.0
AT3G28790 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 2.7e-11 74.7 148 39.9
CARHR151800 Cardamine hirsuta HOM05D008352 ORTHO05D011361 6.0e-11 73.6 69 60.9
BcaC06g33684 Brassica carinata HOM05D007093 ORTHO05D008910 5.1e-10 70.5 59 62.7
THA.LOC104805456 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 1.4e-07 62.4 192 28.6
BcaC03g17568 Brassica carinata HOM05D008352 ORTHO05D024480 6.9e-07 60.1 127 38.6
C02p55470 Brassica napus HOM05D008352 ORTHO05D026834 1.5e-06 58.9 143 33.6
BolC2t11603H Brassica oleracea HOM05D008352 ORTHO05D026834 1.5e-06 58.9 143 33.6
Aa31LG2G4450 Aethionema arabicum HOM05D011893 ORTHO05D013967 2.0e-06 58.5 198 25.8


User provided reference genes

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