Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G4160 Aethionema arabicum HOM05D008101 ORTHO05D010163 2.0e-24 115.5 89 100.0
THA.LOC109116617 Tarenaya hassleriana HOM05D008101 ORTHO05D010163 2.7e-16 88.6 55 78.2
A02p36290 Brassica napus HOM05D008101 ORTHO05D010163 4.5e-16 87.8 57 78.9
BraA02t08628Z Brassica rapa HOM05D008101 ORTHO05D010163 4.5e-16 87.8 57 78.9
C02p56620 Brassica napus HOM05D008101 ORTHO05D010163 5.9e-16 87.4 57 78.9
Sp2g17670 Schrenkiella parvula HOM05D008101 ORTHO05D010163 5.9e-16 87.4 57 78.9
BcaC03g17658 Brassica carinata HOM05D008101 ORTHO05D010163 7.7e-16 87.0 57 78.9
BolC2t11721H Brassica oleracea HOM05D008101 ORTHO05D010163 7.7e-16 87.0 57 78.9
CARHR152140 Cardamine hirsuta HOM05D008101 ORTHO05D010163 7.7e-16 87.0 57 80.7
BcaC03g17547 Brassica carinata HOM05D008101 ORTHO05D010163 1.3e-15 86.3 57 77.2
C02p55260 Brassica napus HOM05D008101 ORTHO05D010163 1.3e-15 86.3 57 77.2
BcaB07g30101 Brassica carinata HOM05D008101 ORTHO05D010163 1.7e-15 85.9 57 78.9
Carub.0005s0764 Capsella rubella HOM05D008101 ORTHO05D010163 1.7e-15 85.9 57 77.2
BcaC06g30874 Brassica carinata HOM05D008101 ORTHO05D010163 2.3e-15 85.5 57 77.2
BcaC06g33664 Brassica carinata HOM05D008101 ORTHO05D010163 2.3e-15 85.5 57 77.2
BcaC06g33665 Brassica carinata HOM05D008101 ORTHO05D010163 2.3e-15 85.5 57 77.2
C07p37940 Brassica napus HOM05D008101 ORTHO05D010163 2.3e-15 85.5 57 77.2
BolC2t11574H Brassica oleracea HOM05D008101 ORTHO05D010163 2.3e-15 85.5 57 77.2
BolC7t44316H Brassica oleracea HOM05D008101 ORTHO05D010163 2.3e-15 85.5 57 77.2
AT3G29034 Arabidopsis thaliana HOM05D008101 ORTHO05D010163 2.9e-15 85.1 57 77.2
AL5G18900 Arabidopsis lyrata HOM05D008101 ORTHO05D010163 5.0e-15 84.3 57 75.4
A06p40170 Brassica napus HOM05D008101 ORTHO05D010163 5.0e-15 84.3 57 75.4
BraA06t26932Z Brassica rapa HOM05D008101 ORTHO05D010163 5.0e-15 84.3 57 75.4
Sp7g02370 Schrenkiella parvula HOM05D008101 ORTHO05D010163 1.8e-12 75.9 51 76.5
Carub.0007s3631 Capsella rubella HOM05D008101 ORTHO05D010163 2.3e-12 75.5 57 66.7
Lj2g0000476 Lotus japonicus HOM05D008101 ORTHO05D010163 5.4e-09 64.3 53 60.4
Cc07_g03530 Coffea canephora HOM05D008101 ORTHO05D010163 9.2e-09 63.5 51 62.7
Glyma.13G062100 Glycine max HOM05D008101 ORTHO05D010163 1.6e-08 62.8 53 60.4
MD09G1053300 Malus domestica HOM05D008101 ORTHO05D010163 2.7e-08 62.0 48 64.6
Gohir.D07G212050 Gossypium hirsutum HOM05D008101 ORTHO05D010163 5.9e-08 60.8 52 59.6
Gorai.001G239800 Gossypium raimondii HOM05D008101 ORTHO05D010163 5.9e-08 60.8 52 59.6
Gohir.A07G206000 Gossypium hirsutum HOM05D008101 ORTHO05D010163 7.8e-08 60.5 52 57.7
Thecc.04G085600 Theobroma cacao HOM05D008101 ORTHO05D010163 7.8e-08 60.5 52 57.7
Dinv33773 Davidia involucrata HOM05D008101 ORTHO05D010163 1.0e-07 60.1 50 54.0
Potri.010G234200 Populus trichocarpa HOM05D008101 ORTHO05D010163 1.0e-07 60.1 52 61.5
Prupe.3G265300 Prunus persica HOM05D008101 ORTHO05D010163 1.3e-07 59.7 52 57.7
RcHm_v2.0_Chr2g0167501 Rosa chinensis HOM05D008101 ORTHO05D010163 1.3e-07 59.7 52 57.7
RcHm_v2.0_Chr2g0167541 Rosa chinensis HOM05D008101 ORTHO05D010163 1.3e-07 59.7 52 57.7
PGR083G0374 Punica granatum HOM05D008101 ORTHO05D010163 2.3e-07 58.9 52 57.7
CSS0047461 Camellia sinensis var. sinensis HOM05D008101 ORTHO05D010163 3.9e-07 58.2 49 53.1
Manes.02G047600 Manihot esculenta HOM05D008101 ORTHO05D010163 5.0e-07 57.8 50 58.0
RcHm_v2.0_Chr2g0167591 Rosa chinensis HOM05D008101 ORTHO05D010163 5.0e-07 57.8 52 55.8
CAN.G206.165 Capsicum annuum HOM05D008101 ORTHO05D010163 1.5e-06 56.2 52 59.6
CiPaw.03G024700 Carya illinoinensis HOM05D008101 ORTHO05D010163 1.5e-06 56.2 52 53.8
Migut.H00938 Erythranthe guttata HOM05D008101 ORTHO05D010163 2.5e-06 55.5 52 55.8
Sed0001905 Sechium edule HOM05D008101 ORTHO05D010163 3.3e-06 55.1 52 57.7
FvH4_6g48300 Fragaria vesca HOM05D008101 ORTHO05D010163 4.3e-06 54.7 47 57.4
FAN09G0090 Fragaria x ananassa HOM05D008101 ORTHO05D010163 4.3e-06 54.7 47 57.4
FAN14G5148 Fragaria x ananassa HOM05D008101 ORTHO05D010163 4.3e-06 54.7 47 57.4
Phvul.004G030000 Phaseolus vulgaris HOM05D008101 ORTHO05D010163 4.3e-06 54.7 53 50.9
Sopen02g032840 Solanum pennellii HOM05D008101 ORTHO05D010163 5.6e-06 54.3 52 55.8
Rhsim10G0036400 Rhododendron simsii HOM05D018356 ORTHO05D010163 9.5e-06 53.5 52 51.9


User provided reference genes

Program Settings