Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G3950 Aethionema arabicum HOM05D005220 ORTHO05D006082 2.7e-170 602.4 435 100.0
AL5G19390 Arabidopsis lyrata HOM05D005220 ORTHO05D006082 1.8e-33 147.9 436 31.4
CiPaw.04G057500 Carya illinoinensis HOM05D005220 ORTHO05D006082 2.6e-24 117.5 285 31.9
Sabra17G0080700 Salix brachista HOM05D005220 ORTHO05D006082 3.4e-24 117.1 198 36.9
GSVIVG01011505001 Vitis vinifera HOM05D005220 ORTHO05D006082 3.4e-24 117.1 198 37.4
Thhalv10005570m.g Eutrema salsugineum HOM05D005220 ORTHO05D006082 5.8e-24 116.3 177 41.2
Ciclev10020317m.g Citrus clementina HOM05D005220 ORTHO05D006082 1.7e-23 114.8 199 38.2
Cc07_g04000 Coffea canephora HOM05D005220 ORTHO05D006082 1.7e-23 114.8 210 38.1
Potri.017G091700 Populus trichocarpa HOM05D005220 ORTHO05D006082 6.4e-23 112.8 197 36.5
SalBow1G1470 Salvia bowleyana HOM05D005220 ORTHO05D006082 6.4e-23 112.8 200 44.0
TWI34G1812 Tripterygium wilfordii HOM05D005220 ORTHO05D006082 1.1e-22 112.1 196 35.7
Lju41C5T5 Lonicera japonica HOM05D005220 ORTHO05D006082 1.9e-22 111.3 202 35.1
MSTRG.3015 Avicennia marina HOM05D005220 ORTHO05D006082 5.5e-22 109.8 199 37.2
Hma1.2p1_0481F.1_g161950 Hydrangea macrophylla HOM05D005220 ORTHO05D006082 7.1e-22 109.4 197 37.6
MSTRG.23894 Avicennia marina HOM05D005220 ORTHO05D006082 9.3e-22 109.0 201 55.7
MD14G1208900 Malus domestica HOM05D005220 ORTHO05D006082 1.2e-21 108.6 203 35.0
Manes.01G098100 Manihot esculenta HOM05D005220 ORTHO05D006082 1.6e-21 108.2 198 36.4
Oeu010241.1 Olea europaea HOM05D005220 ORTHO05D006082 3.5e-21 107.1 263 31.9
Rhsim10G0044300 Rhododendron simsii HOM05D005220 ORTHO05D006082 3.5e-21 107.1 193 36.3
TAR629G0541 Trochodendron aralioides HOM05D005220 ORTHO05D006082 6.0e-21 106.3 195 34.4
Actinidia07816 Actinidia chinensis HOM05D005220 ORTHO05D006082 1.3e-20 105.1 254 31.9
QL10p018718 Quercus lobata HOM05D005220 ORTHO05D006082 2.3e-20 104.4 201 37.3
vmacro05657 Vaccinium macrocarpon HOM05D005220 ORTHO05D006082 2.3e-20 104.4 191 35.6
Dinv34960 Davidia involucrata HOM05D005220 ORTHO05D006082 3.9e-20 103.6 197 33.5
CSS0002601 Camellia sinensis var. sinensis HOM05D005220 ORTHO05D006082 5.1e-20 103.2 201 34.3
Actinidia01983 Actinidia chinensis HOM05D005220 ORTHO05D006082 6.7e-20 102.8 202 35.1
Cfa007639 Carpinus fangiana HOM05D005220 ORTHO05D006082 6.7e-20 102.8 192 37.5
Sc10g0003210 Simmondsia chinensis HOM05D005220 ORTHO05D006082 6.7e-20 102.8 199 34.7
Medtr3g023750 Medicago truncatula HOM05D005220 ORTHO05D006082 8.7e-20 102.4 195 34.4
Dinv33817 Davidia involucrata HOM05D005220 ORTHO05D006082 1.1e-19 102.1 279 32.3
Hund13159 Selenicereus undatus HOM05D005220 ORTHO05D006082 1.1e-19 102.1 201 34.3
Nn3g17397 Nelumbo nucifera HOM05D005220 ORTHO05D006082 1.5e-19 101.7 202 35.1
TAR622G0939 Trochodendron aralioides HOM05D005220 ORTHO05D006082 1.5e-19 101.7 201 35.3
Cfa019301 Carpinus fangiana HOM05D005220 ORTHO05D006082 1.9e-19 101.3 200 36.0
Haze_07684 Corylus avellana HOM05D005220 ORTHO05D006082 1.9e-19 101.3 203 36.5
CsaV3_1G002740 Cucumis sativus L. HOM05D005220 ORTHO05D006082 1.9e-19 101.3 201 36.3
Oeu062150.1 Olea europaea HOM05D005220 ORTHO05D006082 1.9e-19 101.3 201 34.8
Haze_14458 Corylus avellana HOM05D005220 ORTHO05D006082 2.5e-19 100.9 202 36.6
Ca_13809_v3 Cicer arietinum L. HOM05D005220 ORTHO05D006082 4.3e-19 100.1 190 33.7
Sed0005854 Sechium edule HOM05D005220 ORTHO05D006082 4.3e-19 100.1 200 36.0
TWI60G0661 Tripterygium wilfordii HOM05D005220 ORTHO05D006082 5.6e-19 99.8 196 33.7
Aqoxy3G03583 Aquilegia oxysepala HOM05D005220 ORTHO05D006082 7.4e-19 99.4 201 33.8
HanXRQChr14g0448751 Helianthus annuus HOM05D005220 ORTHO05D006082 9.6e-19 99.0 191 33.5
ClCG06G015820 Citrullus lanatus HOM05D005220 ORTHO05D006082 1.3e-18 98.6 197 36.0
Lsat_1_v5_gn_2_87740 Lactuca sativa HOM05D005220 ORTHO05D006082 1.6e-18 98.2 198 34.3
MELO3C017209.2 Cucumis melo HOM05D005220 ORTHO05D006082 2.1e-18 97.8 197 35.5
TPR.G12226 Trifolium pratense HOM05D005220 ORTHO05D006082 2.8e-18 97.4 191 33.5
Prupe.5G201200 Prunus persica HOM05D005220 ORTHO05D006082 4.8e-18 96.7 197 34.5
vmacro18154 Vaccinium macrocarpon HOM05D005220 ORTHO05D006082 4.8e-18 96.7 194 33.5
Glyma.08G242800 Glycine max HOM05D005220 ORTHO05D006082 6.2e-18 96.3 194 34.5
Gorai.008G196900 Gossypium raimondii HOM05D005220 ORTHO05D006082 6.2e-18 96.3 206 32.5
Psat7g133400 Pisum sativum HOM05D005220 ORTHO05D006082 8.1e-18 95.9 195 33.8
TAR374G0076 Trochodendron aralioides HOM05D005220 ORTHO05D006082 8.1e-18 95.9 201 33.3
GSVIVG01007924001 Vitis vinifera HOM05D005220 ORTHO05D006082 8.1e-18 95.9 210 35.2
Cpa.g.sc94.10 Carica papaya HOM05D005220 ORTHO05D006082 1.1e-17 95.5 190 33.2
CiPaw.11G050100 Carya illinoinensis HOM05D005220 ORTHO05D006082 1.1e-17 95.5 198 34.3
Gohir.D12G183566 Gossypium hirsutum HOM05D005220 ORTHO05D006082 1.4e-17 95.1 206 32.5
PSO017G3052 Papaver somniferum HOM05D005220 ORTHO05D006082 1.4e-17 95.1 193 38.3
Lalb_Chr23g0273001 Lupinus albus HOM05D005220 ORTHO05D006082 1.8e-17 94.7 193 35.2
PSO478G1432 Papaver somniferum HOM05D005220 ORTHO05D006082 1.8e-17 94.7 193 39.4
Eucgr.I01975 Eucalyptus grandis HOM05D005220 ORTHO05D006082 3.1e-17 94.0 199 32.7
PSO302G0007 Papaver somniferum HOM05D005220 ORTHO05D006082 4.0e-17 93.6 195 40.0
Sed0003803 Sechium edule HOM05D005220 ORTHO05D006082 4.0e-17 93.6 228 32.0
Glyma.18G265000 Glycine max HOM05D005220 ORTHO05D006082 6.9e-17 92.8 195 34.9
Lj1g0005307 Lotus japonicus HOM05D005220 ORTHO05D006082 9.0e-17 92.4 196 32.7
Phvul.008G035000 Phaseolus vulgaris HOM05D005220 ORTHO05D006082 1.2e-16 92.0 278 28.4
VMungo1383G2795 Vigna mungo HOM05D005220 ORTHO05D006082 2.6e-16 90.9 194 32.0
Rhsim08G0074200 Rhododendron simsii HOM05D005220 ORTHO05D006082 1.0e-15 89.0 191 30.9
CDE10G0382 Ceratophyllum demersum HOM05D005220 ORTHO05D006082 1.3e-15 88.6 199 32.7
DCAR_011050 Daucus carota HOM05D005220 ORTHO05D006082 2.2e-15 87.8 220 30.0
MBI16_g09907_MAGBIO Magnolia biondii HOM05D005220 ORTHO05D006082 2.9e-15 87.4 204 31.4
TAR636G1204 Trochodendron aralioides HOM05D005220 ORTHO05D006082 2.9e-15 87.4 193 33.2
Lj1g0008070 Lotus japonicus HOM05D005220 ORTHO05D006082 4.9e-15 86.7 279 27.6
Lj1g0011465 Lotus japonicus HOM05D005220 ORTHO05D006082 4.9e-15 86.7 193 37.8
arahy.Tifrunner.gnm1.ann1.Y71GGS Arachis hypogaea HOM05D005220 ORTHO05D006082 6.5e-15 86.3 200 30.5
Lalb_Chr17g0337031 Lupinus albus HOM05D005220 ORTHO05D006082 1.4e-14 85.1 192 31.2
arahy.Tifrunner.gnm1.ann1.UWUI2N Arachis hypogaea HOM05D005220 ORTHO05D006082 1.9e-14 84.7 203 30.0
Duzib205G0201 Durio zibethinus HOM05D005220 ORTHO05D006082 1.9e-14 84.7 202 29.2
Gohir.D07G074000 Gossypium hirsutum HOM05D005220 ORTHO05D006082 4.2e-14 83.6 205 30.7
Gorai.001G078200 Gossypium raimondii HOM05D005220 ORTHO05D006082 5.5e-14 83.2 205 30.7
Nitab4.5_0000212g0170 Nicotiana tabacum HOM05D005220 ORTHO05D006082 9.3e-14 82.4 190 30.0
Hund02603 Selenicereus undatus HOM05D005220 ORTHO05D006082 9.3e-14 82.4 196 30.1
Dinv38787 Davidia involucrata HOM05D005220 ORTHO05D006082 1.6e-13 81.6 66 62.1
ECA238G3864 Erigeron canadensis HOM05D005220 ORTHO05D006082 1.6e-13 81.6 191 41.4
FvH4_5g14276 Fragaria vesca HOM05D005220 ORTHO05D006082 1.6e-13 81.6 196 30.1
FAN18G2755 Fragaria x ananassa HOM05D006409 ORTHO05D008250 1.6e-13 81.6 196 30.1
ATR0064G106 Amborella trichopoda HOM05D005220 ORTHO05D006082 2.1e-13 81.3 194 26.8
FAN13G1588 Fragaria x ananassa HOM05D006409 ORTHO05D008250 2.1e-13 81.3 201 29.9
HPP92_009883 Vanilla planifolia HOM05D005220 ORTHO05D006082 2.1e-13 81.3 189 29.6
Ah.11g047990 Amaranthus hybridus HOM05D005220 ORTHO05D006082 2.7e-13 80.9 191 30.4
Os10g0324600 Oryza sativa ssp. japonica HOM05D005220 ORTHO05D006082 3.5e-13 80.5 197 27.9
CAN.G979.12 Capsicum annuum HOM05D005220 ORTHO05D006082 6.0e-13 79.7 183 29.0
ECA246G3789 Erigeron canadensis HOM05D005220 ORTHO05D006082 6.0e-13 79.7 279 26.2
Peaxi162Scf00629g00420 Petunia axillaris HOM05D005220 ORTHO05D006082 6.0e-13 79.7 190 28.9
EL10Ac5g11101 Beta vulgaris HOM05D005220 ORTHO05D006082 7.9e-13 79.3 202 32.7
SGA_v2.0_scaffold52G19178 Striga asiatica HOM05D005220 ORTHO05D006082 7.9e-13 79.3 198 40.9
Migut.H00644 Erythranthe guttata HOM05D005220 ORTHO05D006082 1.3e-12 78.6 68 54.4
AUR62021593 Chenopodium quinoa HOM05D005220 ORTHO05D006082 1.8e-12 78.2 194 29.4
AUR62008499 Chenopodium quinoa HOM05D005220 ORTHO05D006082 2.3e-12 77.8 203 29.6
RcHm_v2.0_Chr7g0182621 Rosa chinensis HOM05D005220 ORTHO05D006082 5.1e-12 76.6 194 27.8
Sc04g0003090 Simmondsia chinensis HOM05D005220 ORTHO05D006082 5.1e-12 76.6 54 63.0
TAR371G0084 Trochodendron aralioides HOM05D005220 ORTHO05D006082 5.1e-12 76.6 439 26.4
Nitab4.5_0007954g0010 Nicotiana tabacum HOM05D005220 ORTHO05D006082 8.7e-12 75.9 243 26.7
PGSC0003DMG400025138 Solanum tuberosum HOM05D005220 ORTHO05D006082 1.5e-11 75.1 206 30.1
ATR0681G067 Amborella trichopoda HOM05D005220 ORTHO05D006082 2.5e-11 74.3 198 27.8
arahy.Tifrunner.gnm1.ann1.XVT01H Arachis hypogaea HOM05D005220 ORTHO05D006082 2.5e-11 74.3 203 30.0
COL.COLO4_22223 Corchorus olitorius HOM05D005220 ORTHO05D006082 2.5e-11 74.3 84 44.0
FAN08G2293 Fragaria x ananassa HOM05D005220 ORTHO05D006082 3.3e-11 73.9 190 27.4
Hund02604 Selenicereus undatus HOM05D005220 ORTHO05D006082 3.3e-11 73.9 222 26.6
Thecc.03G097300 Theobroma cacao HOM05D005220 ORTHO05D006082 5.7e-11 73.2 184 25.5
HanXRQChr05g0157201 Helianthus annuus HOM05D005220 ORTHO05D006082 1.6e-10 71.6 192 26.0
Lsat_1_v5_gn_5_21960 Lactuca sativa HOM05D005220 ORTHO05D006082 2.1e-10 71.2 177 46.9
Actinidia20636 Actinidia chinensis HOM05D001670 ORTHO05D006082 2.8e-10 70.9 56 60.7
Lsat_1_v5_gn_5_21940 Lactuca sativa HOM05D005220 ORTHO05D006082 3.7e-10 70.5 207 28.0
HanXRQChr14g0426851 Helianthus annuus HOM05D005220 ORTHO05D006082 8.2e-10 69.3 59 52.5
HPP92_020440 Vanilla planifolia HOM05D005220 ORTHO05D006082 1.1e-09 68.9 194 29.9
Sopen02g016260 Solanum pennellii HOM05D005220 ORTHO05D006082 1.4e-09 68.6 189 32.8
Solyc02g067070.4 Solanum lycopersicum HOM05D005220 ORTHO05D006082 2.4e-09 67.8 189 33.3
Medtr5g097950 Medicago truncatula HOM05D005220 ORTHO05D006082 6.9e-09 66.2 191 31.4
Thhalv10005407m.g Eutrema salsugineum HOM05D053657 ORTHO05D038760 9.0e-09 65.9 99 46.5
AT3G29330 Arabidopsis thaliana HOM05D053657 ORTHO05D038760 1.2e-08 65.5 258 31.4
arahy.Tifrunner.gnm1.ann1.8S7SHD Arachis hypogaea HOM05D005220 ORTHO05D006082 2.0e-08 64.7 452 25.0
Prupe.6G075200 Prunus persica HOM05D005220 ORTHO05D006082 1.3e-07 62.0 188 25.5
MBI04_g09501_MAGBIO Magnolia biondii HOM05D006954 ORTHO05D008729 3.2e-06 57.4 186 25.8


User provided reference genes

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