Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G3430 Aethionema arabicum HOM05D004795 ORTHO05D005518 7.8e-124 447.2 235 100.0
Sp5g21970 Schrenkiella parvula HOM05D004795 ORTHO05D005518 1.1e-72 277.3 249 66.3
Thhalv10019032m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 3.2e-69 265.8 259 66.0
THA.LOC104805574 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 7.2e-69 264.6 248 65.3
THA.LOC104822635 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 8.2e-65 251.1 247 60.3
Aa31LG9G17140 Aethionema arabicum HOM05D004795 ORTHO05D005518 2.2e-62 243.0 248 61.7
BraA02t06447Z Brassica rapa HOM05D004795 ORTHO05D005518 2.7e-60 236.1 251 61.4
BcaC03g14785 Brassica carinata HOM05D004795 ORTHO05D005518 1.8e-59 233.4 260 58.8
C02p22330 Brassica napus HOM05D004795 ORTHO05D005518 5.7e-58 228.4 221 64.7
BolC2t08386H Brassica oleracea HOM05D004795 ORTHO05D005518 5.7e-58 228.4 255 60.0
A04p11270 Brassica napus HOM05D004795 ORTHO05D005518 7.4e-58 228.0 254 58.7
BraA04t16787Z Brassica rapa HOM05D004795 ORTHO05D005518 7.4e-58 228.0 254 58.7
BcaB06g27183 Brassica carinata HOM05D004795 ORTHO05D005518 9.7e-58 227.6 243 60.5
BolC4t26077H Brassica oleracea HOM05D004795 ORTHO05D005518 1.7e-57 226.9 254 58.7
A07p33770 Brassica napus HOM05D004795 ORTHO05D005518 3.1e-56 222.6 244 61.1
BraA07t31003Z Brassica rapa HOM05D004795 ORTHO05D005518 4.1e-56 222.2 244 61.1
C04p44990 Brassica napus HOM05D004795 ORTHO05D005518 6.9e-56 221.5 254 57.5
C06p43160 Brassica napus HOM05D004795 ORTHO05D005518 4.5e-55 218.8 244 59.4
BcaC02g09641 Brassica carinata HOM05D004795 ORTHO05D005518 1.0e-54 217.6 245 58.8
BolC6t39123H Brassica oleracea HOM05D004795 ORTHO05D005518 3.8e-54 215.7 242 59.9
AT1G67035 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 6.5e-54 214.9 254 57.1
Sp7g03720 Schrenkiella parvula HOM05D004795 ORTHO05D005518 8.5e-54 214.5 250 56.4
BcaB05g24226 Brassica carinata HOM05D004795 ORTHO05D005518 2.5e-53 213.0 254 57.5
Thhalv10027906m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 1.0e-51 207.6 252 54.4
Carub.0002s1332 Capsella rubella HOM05D004795 ORTHO05D005518 1.5e-50 203.8 251 55.4
AL2G25370 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 3.1e-48 196.1 215 60.9
BcaNung06250 Brassica carinata HOM05D004795 ORTHO05D005518 3.1e-48 196.1 222 59.0
CARHR059450 Cardamine hirsuta HOM05D004795 ORTHO05D005518 3.6e-44 182.6 217 55.8
CARHR214290 Cardamine hirsuta HOM05D004795 ORTHO05D005518 8.8e-43 177.9 260 50.4
AT5G38300 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 2.0e-42 176.8 277 49.1
Carub.0005s1274 Capsella rubella HOM05D004795 ORTHO05D005518 6.3e-41 171.8 260 47.3
AL7G52500 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 5.3e-40 168.7 269 46.8
Cpa.g.sc170.57 Carica papaya HOM05D004795 ORTHO05D005518 1.2e-31 141.0 250 43.6
Cfa007915 Carpinus fangiana HOM05D004795 ORTHO05D005518 2.2e-30 136.7 240 43.8
Duzib133G0847 Durio zibethinus HOM05D004795 ORTHO05D005518 1.6e-28 130.6 244 41.8
QL02p051034 Quercus lobata HOM05D004795 ORTHO05D005518 4.7e-28 129.0 240 38.8
QL12p016552 Quercus lobata HOM05D004795 ORTHO05D005518 6.1e-28 128.6 240 38.8
TWI77G0518 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 6.1e-28 128.6 238 43.7
Duzib138G0938 Durio zibethinus HOM05D004795 ORTHO05D005518 1.8e-27 127.1 245 41.6
Sabra04G0081300 Salix brachista HOM05D004795 ORTHO05D005518 1.8e-27 127.1 243 41.6
CiPaw.03G062800 Carya illinoinensis HOM05D004795 ORTHO05D005518 6.8e-27 125.2 241 40.2
TWI53G1522 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 8.8e-27 124.8 238 41.6
Potri.017G116100 Populus trichocarpa HOM05D004795 ORTHO05D005518 1.2e-26 124.4 244 41.4
Sabra17G0096100 Salix brachista HOM05D004795 ORTHO05D005518 2.0e-26 123.6 244 41.0
COL.COLO4_09348 Corchorus olitorius HOM05D004795 ORTHO05D005518 2.6e-26 123.2 245 41.6
Glyma.13G045200 Glycine max HOM05D004795 ORTHO05D005518 2.6e-26 123.2 242 41.3
Manes.02G069600 Manihot esculenta HOM05D004795 ORTHO05D005518 2.6e-26 123.2 242 41.3
Haze_14167 Corylus avellana HOM05D004795 ORTHO05D005518 3.4e-26 122.9 240 40.0
MD17G1245500 Malus domestica HOM05D004795 ORTHO05D005518 3.4e-26 122.9 246 41.9
Phvul.008G007200 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 7.5e-26 121.7 233 39.9
Thecc.04G132300 Theobroma cacao HOM05D004795 ORTHO05D005518 9.8e-26 121.3 244 41.4
Atru.chr1.1662 Acer truncatum HOM05D004795 ORTHO05D005518 2.8e-25 119.8 239 40.2
Duzib211G0180 Durio zibethinus HOM05D004795 ORTHO05D005518 8.3e-25 118.2 244 40.2
CANSAT78G0274 Cannabis sativa HOM05D004795 ORTHO05D005518 2.4e-24 116.7 238 39.9
Nitab4.5_0000912g0060 Nicotiana tabacum HOM05D004795 ORTHO05D005518 3.1e-24 116.3 249 37.3
PGR004G2449 Punica granatum HOM05D004795 ORTHO05D005518 4.1e-24 115.9 237 39.7
Gohir.D11G325800 Gossypium hirsutum HOM05D004795 ORTHO05D005518 5.4e-24 115.5 242 39.7
arahy.Tifrunner.gnm1.ann1.HZ9SBP Arachis hypogaea HOM05D001490 ORTHO05D005518 7.0e-24 115.2 254 37.8
Eucgr.J01506 Eucalyptus grandis HOM05D004795 ORTHO05D005518 7.0e-24 115.2 235 42.1
VMungo1383G1737 Vigna mungo HOM05D004795 ORTHO05D005518 7.0e-24 115.2 238 37.8
MD09G1253700 Malus domestica HOM05D004795 ORTHO05D005518 1.6e-23 114.0 248 38.3
Prupe.3G143600 Prunus persica HOM05D004795 ORTHO05D005518 1.6e-23 114.0 243 39.9
RcHm_v2.0_Chr2g0148201 Rosa chinensis HOM05D004795 ORTHO05D005518 3.5e-23 112.8 244 37.7
Sopen02g030830 Solanum pennellii HOM05D004795 ORTHO05D005518 1.0e-22 111.3 249 38.6
CAN.G625.30 Capsicum annuum HOM05D004795 ORTHO05D005518 1.3e-22 110.9 251 39.4
PGSC0003DMG402026390 Solanum tuberosum HOM05D004795 ORTHO05D005518 1.7e-22 110.5 249 38.2
VMungo0464G1679 Vigna mungo HOM05D004795 ORTHO05D005518 3.8e-22 109.4 244 37.7
Gohir.D11G325700 Gossypium hirsutum HOM05D004795 ORTHO05D005518 6.6e-22 108.6 227 40.5
Lj2g0010000 Lotus japonicus HOM05D004795 ORTHO05D005518 1.1e-21 107.8 246 35.4
Glyma.18G295700 Glycine max HOM05D004795 ORTHO05D005518 1.9e-21 107.1 242 36.8
Gohir.D11G326300 Gossypium hirsutum HOM05D004795 ORTHO05D005518 1.9e-21 107.1 240 37.9
Ciclev10012794m.g Citrus clementina HOM05D004795 ORTHO05D005518 3.3e-21 106.3 235 38.3
CiPaw.04G043000 Carya illinoinensis HOM05D004795 ORTHO05D005518 5.6e-21 105.5 241 37.3
Glyma.08G366700 Glycine max HOM05D004795 ORTHO05D005518 5.6e-21 105.5 206 40.3
DCAR_025909 Daucus carota HOM05D004795 ORTHO05D005518 7.3e-21 105.1 236 38.1
Gohir.A11G163900 Gossypium hirsutum HOM05D004795 ORTHO05D005518 9.5e-21 104.8 217 40.1
ClCG05G012330 Citrullus lanatus HOM05D004795 ORTHO05D005518 1.2e-20 104.4 232 37.9
Gorai.007G182000 Gossypium raimondii HOM05D004795 ORTHO05D005518 2.1e-20 103.6 217 40.1
Manes.01G111300 Manihot esculenta HOM05D004795 ORTHO05D005518 2.8e-20 103.2 239 38.5
TAR629G1480 Trochodendron aralioides HOM05D004795 ORTHO05D005518 2.8e-20 103.2 238 36.6
Ca_08078_v3 Cicer arietinum L. HOM05D004795 ORTHO05D005518 3.6e-20 102.8 207 38.2
Phvul.004G066100 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 3.6e-20 102.8 242 38.4
FAN02G3195 Fragaria x ananassa HOM05D004795 ORTHO05D005518 6.1e-20 102.1 241 39.0
Sed0015257 Sechium edule HOM05D004795 ORTHO05D005518 1.0e-19 101.3 231 38.1
CsaV3_3G020240 Cucumis sativus L. HOM05D004795 ORTHO05D005518 1.8e-19 100.5 228 37.3
Dinv33956 Davidia involucrata HOM05D001490 ORTHO05D001450 1.8e-19 100.5 201 40.8
FAN05G2248 Fragaria x ananassa HOM05D004795 ORTHO05D005518 2.3e-19 100.1 242 38.4
Glyma.19G049900 Glycine max HOM05D004795 ORTHO05D005518 3.0e-19 99.8 243 38.3
Cc07_g08730 Coffea canephora HOM05D004795 ORTHO05D005518 6.8e-19 98.6 246 36.6
FAN14G2363 Fragaria x ananassa HOM05D004795 ORTHO05D005518 6.8e-19 98.6 242 37.6
FAN14G5069 Fragaria x ananassa HOM05D004795 ORTHO05D005518 6.8e-19 98.6 242 37.6
Nn3g17899 Nelumbo nucifera HOM05D004795 ORTHO05D005518 8.9e-19 98.2 240 35.8
Ah.16g101690 Amaranthus hybridus HOM05D004795 ORTHO05D005518 2.0e-18 97.1 204 38.2
Rhsim10G0068600 Rhododendron simsii HOM05D004795 ORTHO05D005518 2.6e-18 96.7 245 36.7
Lsat_1_v5_gn_4_154580 Lactuca sativa HOM05D004795 ORTHO05D005518 4.4e-18 95.9 247 38.5
FvH4_6g36230 Fragaria vesca HOM05D004795 ORTHO05D005518 9.8e-18 94.7 244 36.5
PGR042G3836 Punica granatum HOM05D004795 ORTHO05D005518 9.8e-18 94.7 227 37.4
Oeu039734.1 Olea europaea HOM05D004795 ORTHO05D005518 2.9e-17 93.2 234 34.2
MSTRG.3555 Avicennia marina HOM05D004795 ORTHO05D005518 3.7e-17 92.8 244 36.1
MELO3C023735.2 Cucumis melo HOM05D004795 ORTHO05D005518 1.1e-16 91.3 211 36.5
Psat3g098240 Pisum sativum HOM05D004795 ORTHO05D005518 1.4e-16 90.9 206 37.9
FAN09G4185 Fragaria x ananassa HOM05D004795 ORTHO05D005518 7.0e-16 88.6 218 38.5
Gohir.D11G170200 Gossypium hirsutum HOM05D004795 ORTHO05D005518 9.2e-16 88.2 273 36.3
Oeu050378.1 Olea europaea HOM05D004795 ORTHO05D005518 2.0e-15 87.0 230 35.7
Peaxi162Scf00394g00712 Petunia axillaris HOM05D004795 ORTHO05D005518 2.0e-15 87.0 203 39.9
TPR.G31528 Trifolium pratense HOM05D004795 ORTHO05D005518 4.6e-15 85.9 201 36.3
Oeu016627.1 Olea europaea HOM05D004795 ORTHO05D005518 1.0e-14 84.7 229 35.8
TAR371G0696 Trochodendron aralioides HOM05D004795 ORTHO05D005518 1.7e-14 84.0 218 35.3
Lj1g0003158 Lotus japonicus HOM05D004795 ORTHO05D005518 2.3e-14 83.6 223 38.1
TAR622G0902 Trochodendron aralioides HOM05D004795 ORTHO05D005518 5.0e-14 82.4 239 33.9
SGA_v2.0_scaffold115G32104 Striga asiatica HOM05D004795 ORTHO05D005518 8.6e-14 81.6 188 36.2
Hma1.2p1_1109F.1_g258120 Hydrangea macrophylla HOM05D004795 ORTHO05D005518 1.9e-13 80.5 246 31.3
HanXRQChr11g0325401 Helianthus annuus HOM05D004795 ORTHO05D005518 2.5e-13 80.1 207 39.1
Sc11g0008370 Simmondsia chinensis HOM05D004795 ORTHO05D005518 2.5e-13 80.1 217 35.5
ECA232G0641 Erigeron canadensis HOM05D000072 ORTHO05D000026 3.3e-13 79.7 126 46.0
Medtr7g082230 Medicago truncatula HOM05D004795 ORTHO05D005518 3.3e-13 79.7 205 32.2
AUR62023290 Chenopodium quinoa HOM05D004795 ORTHO05D005518 7.3e-13 78.6 113 44.2
Lalb_Chr10g0091311 Lupinus albus HOM05D004795 ORTHO05D005518 9.5e-13 78.2 207 36.2
Aqoxy3G00247 Aquilegia oxysepala HOM05D004795 ORTHO05D005518 1.6e-12 77.4 236 33.9
Migut.L00330 Erythranthe guttata HOM05D004795 ORTHO05D005518 2.8e-12 76.6 246 30.5
Gorai.007G356700 Gossypium raimondii HOM05D004795 ORTHO05D005518 4.7e-12 75.9 191 34.0
AUR62009011 Chenopodium quinoa HOM05D004795 ORTHO05D005518 1.8e-11 73.9 99 46.5
HanXRQChr11g0330661 Helianthus annuus HOM05D004795 ORTHO05D005518 1.8e-11 73.9 195 36.9
Medtr6g018780 Medicago truncatula HOM05D004795 ORTHO05D005518 5.2e-11 72.4 121 42.1
AUR62043981 Chenopodium quinoa HOM05D004795 ORTHO05D005518 8.9e-11 71.6 262 30.9
Solyc02g086140.2 Solanum lycopersicum HOM05D004795 ORTHO05D005518 8.9e-11 71.6 142 39.4
Nitab4.5_0004416g0090 Nicotiana tabacum HOM05D004795 ORTHO05D005518 1.5e-10 70.9 187 33.7
Gorai.001G202200 Gossypium raimondii HOM05D004795 ORTHO05D005518 3.4e-10 69.7 184 33.7
Ah.06g188560 Amaranthus hybridus HOM05D004795 ORTHO05D005518 8.3e-09 65.1 148 37.2
Gohir.D12G053200 Gossypium hirsutum HOM05D004795 ORTHO05D005518 8.3e-09 65.1 204 32.4
Gorai.008G056400 Gossypium raimondii HOM05D004795 ORTHO05D005518 1.9e-08 63.9 204 31.9
Potri.004G098200 Populus trichocarpa HOM05D004795 ORTHO05D005518 1.9e-08 63.9 141 34.8
unitig_32.g11886 Utricularia gibba HOM05D004795 ORTHO05D005518 3.2e-08 63.2 184 34.2
Lalb_Chr02g0158191 Lupinus albus HOM05D004795 ORTHO05D005518 1.6e-07 60.8 216 29.6
Gohir.A12G054400 Gossypium hirsutum HOM05D004795 ORTHO05D005518 3.5e-07 59.7 206 32.0
PSO541G1476 Papaver somniferum HOM05D004795 ORTHO05D005518 2.3e-06 57.0 171 31.0
MBI09_g36997_MAGBIO Magnolia biondii HOM05D004795 ORTHO05D005518 5.0e-06 55.8 229 25.8


User provided reference genes

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