Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G2500 Aethionema arabicum HOM05D009162 ORTHO05D015260 7.9e-36 153.3 80 100.0
CARHR057220 Cardamine hirsuta HOM05D009162 ORTHO05D015260 2.0e-18 95.5 83 67.5
AT1G65510 Arabidopsis thaliana HOM05D009162 ORTHO05D015260 9.7e-18 93.2 83 66.3
AL2G22440 Arabidopsis lyrata HOM05D009162 ORTHO05D015260 6.3e-17 90.5 83 63.9
Thhalv10019385m.g Eutrema salsugineum HOM05D009162 ORTHO05D015260 7.7e-15 83.6 68 70.6
Carub.0002s1130 Capsella rubella HOM05D009162 ORTHO05D015260 2.2e-14 82.0 74 62.2
Carub.0002s1133 Capsella rubella HOM05D009162 ORTHO05D015260 1.5e-13 79.3 84 59.5
BcaB05g24120 Brassica carinata HOM05D009162 ORTHO05D015260 1.9e-13 79.0 83 60.2
BcaB01g02861 Brassica carinata HOM05D009162 ORTHO05D012456 9.4e-13 76.6 88 58.0
BraA02t06381Z Brassica rapa HOM05D009162 ORTHO05D015260 1.2e-12 76.3 83 59.0
Carub.0002s1132 Capsella rubella HOM05D009162 ORTHO05D015260 1.2e-12 76.3 87 56.3
BolC2t08280H Brassica oleracea HOM05D009162 ORTHO05D015260 2.1e-12 75.5 83 57.8
AT1G65500 Arabidopsis thaliana HOM05D009162 ORTHO05D012456 3.7e-09 64.7 73 58.9
AL2G22400 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 8.2e-09 63.5 87 50.6
AL2G22390 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 1.4e-08 62.8 87 50.6
AT1G65486 Arabidopsis thaliana HOM05D009162 ORTHO05D012456 1.8e-08 62.4 87 52.9
Carub.0002s1127 Capsella rubella HOM05D009162 ORTHO05D012456 2.4e-08 62.0 65 58.5
AT1G65490 Arabidopsis thaliana HOM05D009162 ORTHO05D012456 4.1e-08 61.2 76 59.2
AL2G22430 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 5.3e-08 60.8 73 54.8
Carub.0002s1126 Capsella rubella HOM05D009162 ORTHO05D012456 1.2e-07 59.7 48 75.0
BcaC08g43009 Brassica carinata HOM05D009162 ORTHO05D012456 1.6e-07 59.3 74 56.8
BraA06t23670Z Brassica rapa HOM05D009162 ORTHO05D012456 1.6e-07 59.3 74 56.8
Carub.0002s1129 Capsella rubella HOM05D009162 ORTHO05D012456 1.6e-07 59.3 62 62.9
A06p04670 Brassica napus HOM05D009162 ORTHO05D012456 3.5e-07 58.2 73 56.2
C06p02580 Brassica napus HOM05D009162 ORTHO05D012456 3.5e-07 58.2 73 56.2
BolC6t35386H Brassica oleracea HOM05D009162 ORTHO05D012456 3.5e-07 58.2 74 56.8
CARHR057200 Cardamine hirsuta HOM05D009162 ORTHO05D012456 3.5e-07 58.2 87 52.9
AL2G22370 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 1.7e-06 55.8 75 53.3
AL2G22410 Arabidopsis lyrata HOM05D009162 ORTHO05D015260 1.7e-06 55.8 53 66.0
Thhalv10019360m.g Eutrema salsugineum HOM05D009162 ORTHO05D012456 2.2e-06 55.5 91 49.5
Sp5g20410 Schrenkiella parvula HOM05D009162 ORTHO05D012456 6.5e-06 53.9 62 54.8


User provided reference genes

Program Settings