Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G2480 Aethionema arabicum HOM05D005855 ORTHO05D006406 0.0e+00 1427.9 806 100.0
Thhalv10018127m.g Eutrema salsugineum HOM05D005855 ORTHO05D006406 6.7e-300 1033.9 817 74.3
Sp5g20320 Schrenkiella parvula HOM05D005855 ORTHO05D006406 2.0e-296 1022.3 819 73.7
AT1G65470 Arabidopsis thaliana HOM05D005855 ORTHO05D006406 5.5e-278 961.1 816 70.8
AL2G22160 Arabidopsis lyrata HOM05D005855 ORTHO05D006406 7.0e-273 944.1 801 70.7
Carub.0002s1120 Capsella rubella HOM05D005855 ORTHO05D006406 2.7e-269 932.2 828 69.0
CARHR057120 Cardamine hirsuta HOM05D005855 ORTHO05D006406 4.2e-262 908.3 794 70.0
BolC6t38999H Brassica oleracea HOM05D005855 ORTHO05D006406 1.8e-257 892.9 811 70.7
C06p39070 Brassica napus HOM05D005855 ORTHO05D006406 4.1e-257 891.7 811 70.5
THA.LOC104822010 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 6.5e-255 884.4 813 62.7
A07p32840 Brassica napus HOM05D005855 ORTHO05D006406 1.9e-254 882.9 795 71.4
BraA07t30911Z Brassica rapa HOM05D005855 ORTHO05D006406 1.9e-254 882.9 794 71.4
THA.LOC104805689 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 9.1e-249 864.0 817 62.4
Dinv17130 Davidia involucrata HOM05D005855 ORTHO05D006406 6.0e-184 648.7 808 52.7
Atru.chr2.218 Acer truncatum HOM05D005855 ORTHO05D006406 1.1e-177 627.9 797 54.1
QL01p051691 Quercus lobata HOM05D005855 ORTHO05D006406 6.1e-176 622.1 808 51.7
Ciclev10000302m.g Citrus clementina HOM05D005855 ORTHO05D006406 1.3e-175 620.9 819 50.2
QL01p051722 Quercus lobata HOM05D005855 ORTHO05D006406 3.0e-175 619.8 808 51.6
Prupe.6G365000 Prunus persica HOM05D005855 ORTHO05D006406 1.9e-174 617.1 801 50.7
CiPaw.08G111900 Carya illinoinensis HOM05D005855 ORTHO05D006406 8.2e-173 611.7 800 50.2
TWI18G0231 Tripterygium wilfordii HOM05D005855 ORTHO05D006406 1.4e-172 610.9 784 51.4
vmacro08871 Vaccinium macrocarpon HOM05D005855 ORTHO05D006406 1.8e-172 610.5 863 47.4
Gohir.A13G090000 Gossypium hirsutum HOM05D005855 ORTHO05D006406 6.9e-172 608.6 822 50.5
Gorai.002G148000 Gossypium raimondii HOM05D005855 ORTHO05D006406 9.0e-172 608.2 822 50.9
MD12G1261700 Malus domestica HOM05D005855 ORTHO05D006406 1.5e-171 607.4 799 50.2
Rhsim04G0133000 Rhododendron simsii HOM05D005855 ORTHO05D006406 1.0e-170 604.7 813 50.4
Haze_04608 Corylus avellana HOM05D005855 ORTHO05D006406 1.7e-170 604.0 873 46.7
Lalb_Chr03g0038151 Lupinus albus HOM05D005855 ORTHO05D006406 3.8e-170 602.8 818 46.3
FvH4_6g00081 Fragaria vesca HOM05D005855 ORTHO05D006406 7.2e-169 598.6 809 49.7
FAN14G2818 Fragaria x ananassa HOM05D005855 ORTHO05D006406 9.4e-169 598.2 809 49.7
Potri.008G077800 Populus trichocarpa HOM05D005855 ORTHO05D006406 1.2e-168 597.8 825 49.8
Glyma.18G244800 Glycine max HOM05D005855 ORTHO05D006406 4.6e-168 595.9 824 47.9
TAR633G1091 Trochodendron aralioides HOM05D005855 ORTHO05D006406 4.6e-168 595.9 780 51.3
RcHm_v2.0_Chr3g0447421 Rosa chinensis HOM05D005855 ORTHO05D006406 1.4e-167 594.3 798 49.7
Sabra08G0057900 Salix brachista HOM05D005855 ORTHO05D006406 1.4e-167 594.3 819 50.1
CANSAT64G2413 Cannabis sativa HOM05D005855 ORTHO05D006406 2.0e-166 590.5 805 49.9
Lj8C197T11 Lonicera japonica HOM05D005855 ORTHO05D006406 2.0e-166 590.5 816 49.9
CsaV3_2G010280 Cucumis sativus L. HOM05D005855 ORTHO05D006406 3.3e-166 589.7 801 47.9
COL.COLO4_22931 Corchorus olitorius HOM05D005855 ORTHO05D006406 5.7e-166 589.0 822 51.1
MELO3C008612.2 Cucumis melo HOM05D005855 ORTHO05D006406 7.4e-166 588.6 797 48.3
Duzib177G0112 Durio zibethinus HOM05D005855 ORTHO05D006406 1.3e-165 587.8 810 51.7
TPR.G31229 Trifolium pratense HOM05D005855 ORTHO05D006406 2.2e-165 587.0 826 47.2
Actinidia19643 Actinidia chinensis HOM05D005855 ORTHO05D006406 1.1e-164 584.7 798 50.9
Manes.13G000700 Manihot esculenta HOM05D005855 ORTHO05D006406 1.4e-164 584.3 819 49.2
Glyma.09G248000 Glycine max HOM05D005855 ORTHO05D006406 9.1e-164 581.6 826 47.3
Gorai.003G087300 Gossypium raimondii HOM05D005855 ORTHO05D006406 1.2e-163 581.3 803 51.4
FAN02G1917 Fragaria x ananassa HOM05D005855 ORTHO05D006406 2.0e-163 580.5 815 48.2
Gohir.A02G107108 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.3e-162 577.8 805 50.6
Gohir.D03G072500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.3e-162 577.8 803 51.4
ECA232G0592 Erigeron canadensis HOM05D005855 ORTHO05D006406 6.5e-162 575.5 804 50.4
PGSC0003DMG400016248 Solanum tuberosum HOM05D005855 ORTHO05D006406 8.5e-162 575.1 796 50.0
Peaxi162Scf00254g00712 Petunia axillaris HOM05D005855 ORTHO05D006406 1.1e-161 574.7 810 49.8
Sopen11g004450 Solanum pennellii HOM05D005855 ORTHO05D006406 1.4e-161 574.3 796 49.6
Thecc.05G112200 Theobroma cacao HOM05D005855 ORTHO05D006406 2.1e-160 570.5 766 53.0
Phvul.008G051800 Phaseolus vulgaris HOM05D005855 ORTHO05D006406 7.9e-160 568.5 822 44.9
Gohir.D13G093500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 2.3e-159 567.0 824 49.0
Solyc11g008670.2 Solanum lycopersicum HOM05D005855 ORTHO05D006406 3.0e-159 566.6 796 49.4
Ca_08015_v3 Cicer arietinum L. HOM05D005855 ORTHO05D006406 3.9e-159 566.2 824 45.8
FAN09G4305 Fragaria x ananassa HOM05D005855 ORTHO05D006406 6.7e-159 565.5 833 47.5
Lj1g0024601 Lotus japonicus HOM05D005855 ORTHO05D006406 8.8e-159 565.1 791 45.3
AUR62000270 Chenopodium quinoa HOM05D005855 ORTHO05D006406 2.6e-158 563.5 809 47.6
arahy.Tifrunner.gnm1.ann1.VEFL47 Arachis hypogaea HOM05D005855 ORTHO05D006406 4.4e-158 562.8 790 48.6
TAR362G1086 Trochodendron aralioides HOM05D005855 ORTHO05D006406 8.2e-157 558.5 781 50.3
Nitab4.5_0001003g0160 Nicotiana tabacum HOM05D005855 ORTHO05D006406 2.4e-156 557.0 822 46.7
TWI36G1346 Tripterygium wilfordii HOM05D000941 ORTHO05D006406 2.4e-156 557.0 775 50.8
Sed0023015 Sechium edule HOM05D005855 ORTHO05D006406 9.1e-156 555.1 798 47.1
ClCG11G010010 Citrullus lanatus HOM05D005855 ORTHO05D006406 1.5e-155 554.3 805 46.1
Ah.04g159310 Amaranthus hybridus HOM05D005855 ORTHO05D006406 2.0e-155 553.9 796 47.2
PGR031G3878 Punica granatum HOM05D005855 ORTHO05D006406 2.0e-155 553.9 791 47.4
Psat3g103080 Pisum sativum HOM05D005855 ORTHO05D006406 1.5e-153 547.7 850 43.4
DCAR_031596 Daucus carota HOM05D005855 ORTHO05D006406 2.5e-153 547.0 840 43.3
Nitab4.5_0003928g0050 Nicotiana tabacum HOM05D005855 ORTHO05D006406 3.2e-153 546.6 813 47.0
CAN.G321.5 Capsicum annuum HOM05D005855 ORTHO05D006406 5.5e-153 545.8 800 48.5
Aqoxy2G04154 Aquilegia oxysepala HOM05D005855 ORTHO05D006406 7.2e-153 545.4 813 45.1
Cc09_g04110 Coffea canephora HOM05D005855 ORTHO05D006406 4.7e-152 542.7 819 47.4
Hund21931 Selenicereus undatus HOM05D005855 ORTHO05D006406 1.0e-151 541.6 796 45.6
VMungo1383G1707 Vigna mungo HOM05D005855 ORTHO05D006406 1.0e-151 541.6 783 44.3
Medtr7g080500 Medicago truncatula HOM05D005855 ORTHO05D006406 3.0e-151 540.0 810 45.7
MD00G1017400 Malus domestica HOM05D005855 ORTHO05D006406 1.1e-150 538.1 817 45.3
EL10Ac4g10026 Beta vulgaris HOM05D005855 ORTHO05D006406 7.0e-148 528.9 808 46.7
MBI07_g11487_MAGBIO Magnolia biondii HOM05D005855 ORTHO05D006406 7.0e-148 528.9 805 46.5
Oeu034710.1 Olea europaea HOM05D005855 ORTHO05D006406 1.2e-147 528.1 793 47.5
MSTRG.8191 Avicennia marina HOM05D005855 ORTHO05D006406 1.1e-145 521.5 818 45.5
Lalb_Chr21g0311491 Lupinus albus HOM05D005855 ORTHO05D006406 9.4e-145 518.5 775 44.6
AUR62006618 Chenopodium quinoa HOM05D005855 ORTHO05D006406 2.7e-144 516.9 831 43.9
Migut.F01842 Erythranthe guttata HOM05D005855 ORTHO05D006406 5.2e-143 512.7 811 45.9
HanXRQChr16g0511741 Helianthus annuus HOM05D005855 ORTHO05D006406 8.8e-143 511.9 802 47.1
Eucgr.B01457 Eucalyptus grandis HOM05D005855 ORTHO05D006406 2.8e-141 506.9 674 51.9
SGA_v2.0_scaffold340G49313 Striga asiatica HOM05D005855 ORTHO05D006406 9.1e-140 501.9 821 44.8
Lsat_1_v5_gn_0_14480 Lactuca sativa HOM05D005855 ORTHO05D006406 5.9e-139 499.2 791 47.4
Sc16g0010640 Simmondsia chinensis HOM05D005855 ORTHO05D006406 2.2e-138 497.3 751 46.5
Potri.002G209795 Populus trichocarpa HOM05D005855 ORTHO05D006406 3.1e-132 476.9 678 48.5
SGA_v2.0_scaffold122G33208 Striga asiatica HOM05D005855 ORTHO05D006406 1.2e-131 474.9 821 43.0
Actinidia07922 Actinidia chinensis HOM05D005855 ORTHO05D006406 1.7e-130 471.1 667 49.8
PSO017G4019 Papaver somniferum HOM05D005855 ORTHO05D006406 1.1e-129 468.4 774 44.3
PSO573G0046 Papaver somniferum HOM05D005855 ORTHO05D006406 6.1e-128 462.6 781 44.0
Actinidia31264 Actinidia chinensis HOM05D005855 ORTHO05D006406 7.3e-121 439.1 816 38.5
QL01p051710 Quercus lobata HOM05D005855 ORTHO05D006406 1.8e-119 434.5 521 51.2
Os01g0896300 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 3.7e-117 426.8 844 39.0
unitig_749.g13497 Utricularia gibba HOM05D005855 ORTHO05D006406 1.6e-115 421.4 821 43.0
Zm00001eb144810 Zea mays HOM05D005855 ORTHO05D006406 2.5e-113 414.1 901 35.2
Oeu001220.3 Olea europaea HOM05D005855 ORTHO05D006406 5.6e-113 412.9 725 44.4
Zm00001eb365740 Zea mays HOM05D005855 ORTHO05D006406 2.9e-109 400.6 902 35.3
HPP92_024393 Vanilla planifolia HOM05D005855 ORTHO05D006406 5.6e-105 386.3 805 40.6
arahy.Tifrunner.gnm1.ann1.65FHJK Arachis hypogaea HOM05D005855 ORTHO05D006406 4.0e-95 353.6 481 46.6
ATR0743G043 Amborella trichopoda HOM05D005855 ORTHO05D006406 4.9e-93 346.7 880 35.0
SEGI_12971 Sequoiadendron giganteum HOM05D005855 ORTHO05D006406 2.3e-90 337.8 865 37.7
CDE04G3007 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 9.3e-84 315.8 773 37.8
Zm00001eb304780 Zea mays HOM05D005855 ORTHO05D006406 2.5e-81 307.8 812 32.8
Cpa.g.sc88.1 Carica papaya HOM05D005855 ORTHO05D006406 5.1e-74 283.5 558 38.2
CDE02G2532 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 1.4e-68 265.4 589 39.7
GSVIVG01007185001 Vitis vinifera HOM05D005855 ORTHO05D006406 5.7e-57 226.9 237 56.1
arahy.Tifrunner.gnm1.ann1.8C47BX Arachis hypogaea HOM05D005855 ORTHO05D006406 3.8e-53 214.2 491 35.4
Os07g0273301 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 3.2e-52 211.1 493 34.1
arahy.Tifrunner.gnm1.ann1.F2WWIZ Arachis hypogaea HOM05D005855 ORTHO05D006406 5.5e-52 210.3 487 35.5
Cpa.g.c37190 Carica papaya HOM05D005855 ORTHO05D006406 3.9e-42 177.6 169 55.0
Dinv29076 Davidia involucrata HOM05D005855 ORTHO05D006406 2.6e-41 174.9 782 27.0
AagrBONN_evm.TU.Sc2ySwM_344.4907 Anthoceros agrestis HOM05D005855 ORTHO05D006406 9.7e-41 172.9 840 26.9
GSVIVG01007186001 Vitis vinifera HOM05D005855 ORTHO05D006406 4.2e-36 157.5 112 67.9
arahy.Tifrunner.gnm1.ann1.X0XBNQ Arachis hypogaea HOM05D005855 ORTHO05D006406 1.3e-32 146.0 197 46.7
Pp3c3_24970 Physcomitrium patens HOM05D005855 ORTHO05D006406 2.2e-32 145.2 377 30.8
Mapoly0189s0010 Marchantia polymorpha HOM05D005855 ORTHO05D006406 1.1e-31 142.9 718 29.8
VMungo1383G0582 Vigna mungo HOM05D005855 ORTHO05D000818 3.5e-30 137.9 240 37.1
SMO356G0323 Selaginella moellendorffii HOM05D005855 ORTHO05D006406 5.9e-30 137.1 467 28.7
TPR.G32502 Trifolium pratense HOM05D005855 ORTHO05D006406 5.7e-25 120.6 180 42.8
Zm00001eb310680 Zea mays HOM05D000012 ORTHO05D006406 5.4e-23 114.0 152 44.7
CBR_g39948 Chara braunii HOM05D005855 ORTHO05D006406 1.4e-18 99.4 218 34.4
Zm00001eb381860 Zea mays HOM05D000012 ORTHO05D006406 5.9e-14 84.0 103 46.6
Zm00001eb367440 Zea mays HOM05D005855 ORTHO05D006406 1.0e-13 83.2 115 47.8
Lj9A5T14 Lonicera japonica HOM05D016202 ORTHO05D006406 1.8e-07 62.4 161 36.6
Ah.06g195260 Amaranthus hybridus HOM05D005855 ORTHO05D006406 3.2e-07 61.6 124 37.1
Lju1034A2T22 Lonicera japonica HOM05D016202 ORTHO05D006406 9.2e-07 60.1 70 48.6
Lju1609C0T10 Lonicera japonica HOM05D005855 ORTHO05D006406 2.0e-06 58.9 66 50.0
Lju1609C0G6 Lonicera japonica HOM05D016202 ORTHO05D006406 3.5e-06 58.2 63 50.8
Nn8g40536 Nelumbo nucifera HOM05D005855 ORTHO05D006406 4.6e-06 57.8 56 48.2


User provided reference genes

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