Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G2390 Aethionema arabicum HOM05D005786 ORTHO05D006946 1.9e-164 582.4 291 100.0
Thhalv10018947m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 4.2e-135 485.0 294 82.7
Carub.0002s1084 Capsella rubella HOM05D005786 ORTHO05D006946 7.1e-135 484.2 300 81.7
AT1G65270 Arabidopsis thaliana HOM05D005786 ORTHO05D006946 7.9e-134 480.7 293 82.9
Sp5g19940 Schrenkiella parvula HOM05D005786 ORTHO05D006946 2.5e-132 475.7 295 81.0
AL2G20300 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 9.6e-132 473.8 293 81.6
CARHR056920 Cardamine hirsuta HOM05D005786 ORTHO05D006946 5.3e-130 468.0 297 81.1
BcaB05g24100 Brassica carinata HOM05D005786 ORTHO05D006946 1.5e-129 466.5 291 81.1
BraA02t06369Z Brassica rapa HOM05D005786 ORTHO05D006946 3.5e-126 455.3 291 77.7
A02p13150 Brassica napus HOM05D005786 ORTHO05D006946 2.5e-124 449.1 291 78.0
THA.LOC104823809 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 2.0e-121 439.5 280 76.1
Thhalv10004459m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 3.4e-121 438.7 290 78.6
THA.LOC104805701 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 1.7e-120 436.4 290 75.9
C04p43640 Brassica napus HOM05D005786 ORTHO05D006946 2.9e-120 435.6 298 76.2
BcaB06g27020 Brassica carinata HOM05D005786 ORTHO05D006946 1.9e-119 433.0 299 75.9
BcaC02g09515 Brassica carinata HOM05D005786 ORTHO05D006946 3.2e-119 432.2 298 75.5
Sp7g05900 Schrenkiella parvula HOM05D005786 ORTHO05D006946 9.3e-119 430.6 287 77.7
A04p10160 Brassica napus HOM05D005786 ORTHO05D006946 2.1e-118 429.5 298 75.5
BraA04t16680Z Brassica rapa HOM05D005786 ORTHO05D006946 7.9e-118 427.6 301 75.1
C02p21270 Brassica napus HOM05D005786 ORTHO05D006946 5.1e-117 424.9 295 72.9
Thecc.05G189200 Theobroma cacao HOM05D005786 ORTHO05D006946 9.4e-111 404.1 301 68.8
RcHm_v2.0_Chr3g0447611 Rosa chinensis HOM05D005786 ORTHO05D006946 1.8e-109 399.8 285 68.4
FvH4_6g00240 Fragaria vesca HOM05D005786 ORTHO05D006946 3.0e-109 399.1 274 70.4
Duzib235G1473 Durio zibethinus HOM05D005786 ORTHO05D006946 6.7e-109 397.9 286 69.9
Actinidia06794 Actinidia chinensis HOM05D005786 ORTHO05D006946 8.8e-109 397.5 271 72.7
Gohir.D03G060604 Gossypium hirsutum HOM05D005786 ORTHO05D006946 4.3e-108 395.2 286 68.9
Gohir.A02G112711 Gossypium hirsutum HOM05D005786 ORTHO05D006946 5.7e-108 394.8 286 68.9
Oeu034777.1 Olea europaea HOM05D005786 ORTHO05D006946 6.3e-107 391.3 274 71.5
Prupe.6G363100 Prunus persica HOM05D005786 ORTHO05D006946 6.3e-107 391.3 285 68.4
Gorai.002G056000 Gossypium raimondii HOM05D005786 ORTHO05D006946 8.2e-107 391.0 289 68.5
MD04G1246900 Malus domestica HOM05D005786 ORTHO05D006946 2.4e-106 389.4 290 67.2
CANSAT54G1960 Cannabis sativa HOM05D005786 ORTHO05D006946 2.6e-105 386.0 285 68.1
Cfa006249 Carpinus fangiana HOM05D005786 ORTHO05D006946 2.6e-105 386.0 276 69.2
MD12G1263300 Malus domestica HOM05D005786 ORTHO05D006946 1.0e-104 384.0 295 65.1
CiPaw.07G082100 Carya illinoinensis HOM05D005786 ORTHO05D006946 1.3e-104 383.6 282 67.4
Nn7g37593 Nelumbo nucifera HOM05D005786 ORTHO05D006946 2.5e-103 379.4 291 67.0
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 2.5e-103 379.4 278 68.0
Phvul.008G052600 Phaseolus vulgaris HOM05D005786 ORTHO05D006946 4.2e-103 378.6 274 66.4
Dinv29083 Davidia involucrata HOM05D005786 ORTHO05D006946 9.4e-103 377.5 284 69.0
Ca_08003_v3 Cicer arietinum L. HOM05D005786 ORTHO05D006946 1.2e-102 377.1 278 67.6
PGR031G0068 Punica granatum HOM05D005786 ORTHO05D006946 1.6e-102 376.7 281 67.3
TWI18G0853 Tripterygium wilfordii HOM05D005786 ORTHO05D006946 2.1e-102 376.3 279 66.3
CSS0002276 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 2.7e-102 375.9 276 67.8
Ciclev10012322m.g Citrus clementina HOM05D005786 ORTHO05D006946 2.7e-102 375.9 283 66.4
Aqoxy5G04319 Aquilegia oxysepala HOM05D005786 ORTHO05D006946 3.6e-102 375.6 296 66.9
VMungo1383G2134 Vigna mungo HOM05D005786 ORTHO05D006946 7.9e-102 374.4 275 66.2
Cc09_g03910 Coffea canephora HOM05D005786 ORTHO05D006946 2.3e-101 372.9 284 65.1
Medtr7g080350 Medicago truncatula HOM05D005786 ORTHO05D006946 2.3e-101 372.9 282 66.0
GSVIVG01019061001 Vitis vinifera HOM05D005786 ORTHO05D006946 2.3e-101 372.9 302 64.6
arahy.Tifrunner.gnm1.ann1.K5KE50 Arachis hypogaea HOM05D005786 ORTHO05D006946 8.8e-101 370.9 283 66.1
Manes.13G003500 Manihot esculenta HOM05D005786 ORTHO05D006946 1.1e-100 370.5 279 67.7
FAN05G2398 Fragaria x ananassa HOM05D005786 ORTHO05D006946 2.0e-100 369.8 293 64.5
Atru.chr12.1725 Acer truncatum HOM05D005786 ORTHO05D006946 2.6e-100 369.4 268 67.9
Glyma.09G248700 Glycine max HOM05D005786 ORTHO05D006946 4.4e-100 368.6 272 66.2
Migut.F01861 Erythranthe guttata HOM05D005786 ORTHO05D006946 5.7e-100 368.2 281 68.0
Lj1A579T43 Lonicera japonica HOM05D005786 ORTHO05D006946 5.7e-100 368.2 323 60.4
arahy.Tifrunner.gnm1.ann1.BC747V Arachis hypogaea HOM05D005786 ORTHO05D006946 1.7e-99 366.7 283 65.4
Glyma.18G244000 Glycine max HOM05D005786 ORTHO05D006946 1.7e-99 366.7 263 69.2
Sc16g0010480 Simmondsia chinensis HOM05D005786 ORTHO05D006946 1.7e-99 366.7 283 65.0
TAR633G0414 Trochodendron aralioides HOM05D005786 ORTHO05D006946 2.2e-99 366.3 284 65.8
FAN09G1835 Fragaria x ananassa HOM05D005786 ORTHO05D006946 8.2e-99 364.4 293 63.8
PSO832G0344 Papaver somniferum HOM05D005786 ORTHO05D006946 1.4e-98 363.6 292 64.0
PSO210G0333 Papaver somniferum HOM05D005786 ORTHO05D006946 2.4e-98 362.8 292 64.0
Dinv15702 Davidia involucrata HOM05D005786 ORTHO05D006946 3.1e-98 362.5 295 64.7
CAN.G37.2 Capsicum annuum HOM05D005786 ORTHO05D006946 7.0e-98 361.3 283 65.4
Lj1g0012134 Lotus japonicus HOM05D005786 ORTHO05D006946 9.1e-98 360.9 285 64.6
MSTRG.335 Avicennia marina HOM05D005786 ORTHO05D006946 1.0e-96 357.5 292 63.4
Lalb_Chr03g0038061 Lupinus albus HOM05D005786 ORTHO05D006946 1.0e-96 357.5 289 62.3
FAN14G0011 Fragaria x ananassa HOM05D005786 ORTHO05D006946 8.5e-96 354.4 301 60.8
Potri.019G055100 Populus trichocarpa HOM05D005786 ORTHO05D006946 8.5e-96 354.4 299 64.2
Sopen04g017810 Solanum pennellii HOM05D005786 ORTHO05D006946 4.2e-95 352.1 270 68.1
Nitab4.5_0003825g0070 Nicotiana tabacum HOM05D005786 ORTHO05D006946 4.7e-94 348.6 283 65.0
CsaV3_1G044270 Cucumis sativus L. HOM05D005786 ORTHO05D006946 6.7e-93 344.7 281 61.6
Sed0025282 Sechium edule HOM05D005786 ORTHO05D006946 6.7e-93 344.7 281 61.6
Hund07363 Selenicereus undatus HOM05D005786 ORTHO05D006946 6.7e-93 344.7 295 59.7
DCAR_030004 Daucus carota HOM05D005786 ORTHO05D006946 8.8e-93 344.4 284 63.4
MELO3C010021.2 Cucumis melo HOM05D005786 ORTHO05D006946 4.4e-92 342.0 281 61.2
SalBow6G2392 Salvia bowleyana HOM05D005786 ORTHO05D006946 2.8e-91 339.3 288 62.8
HanXRQChr04g0101081 Helianthus annuus HOM05D005786 ORTHO05D006946 4.8e-91 338.6 277 65.0
Lsat_1_v5_gn_0_14820 Lactuca sativa HOM05D005786 ORTHO05D006946 1.4e-90 337.0 305 61.0
ECA232G2695 Erigeron canadensis HOM05D005786 ORTHO05D006946 9.1e-90 334.3 275 64.4
HPP92_023718 Vanilla planifolia HOM05D005786 ORTHO05D006946 9.1e-90 334.3 285 60.0
Sabra19G0064300 Salix brachista HOM05D005786 ORTHO05D006946 7.7e-89 331.3 332 57.5
EL10Ac4g10004 Beta vulgaris HOM05D005786 ORTHO05D006946 3.8e-88 328.9 281 60.1
MBI07_g02892_MAGBIO Magnolia biondii HOM05D005786 ORTHO05D006946 4.0e-85 318.9 256 64.8
CDE04G1735 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 7.5e-84 314.7 281 59.8
SGA_v2.0_scaffold340G49308 Striga asiatica HOM05D005786 ORTHO05D006946 3.7e-83 312.4 278 61.2
Peaxi162Scf01053g00210 Petunia axillaris HOM05D005786 ORTHO05D006946 5.3e-82 308.5 278 60.4
Lsat_1_v5_gn_2_63981 Lactuca sativa HOM05D005786 ORTHO05D006946 7.0e-82 308.1 280 60.4
AUR62006638 Chenopodium quinoa HOM05D005786 ORTHO05D006946 9.1e-82 307.8 303 56.4
ATR0743G231 Amborella trichopoda HOM05D005786 ORTHO05D006946 3.5e-81 305.8 301 56.5
CDE07G0365 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 1.7e-80 303.5 280 58.2
Nitab4.5_0000248g0060 Nicotiana tabacum HOM05D005786 ORTHO05D006946 2.9e-80 302.8 287 57.8
CARHR216460 Cardamine hirsuta HOM05D005786 ORTHO05D006946 1.9e-79 300.1 193 79.3
Zm00001eb168750 Zea mays HOM05D005786 ORTHO05D006946 6.1e-78 295.0 295 54.9
CSS0048270 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 9.8e-76 287.7 243 61.7
Os11g0264600 Oryza sativa ssp. japonica HOM05D005786 ORTHO05D006946 2.5e-71 273.1 223 59.6
SEGI_32803 Sequoiadendron giganteum HOM05D005786 ORTHO05D006946 1.2e-70 270.8 275 52.0
unitig_0.g385 Utricularia gibba HOM05D005786 ORTHO05D006946 9.8e-68 261.2 277 53.4
BcaC03g14691 Brassica carinata HOM05D005786 ORTHO05D006946 6.3e-67 258.5 205 66.3
Psat3g102080 Pisum sativum HOM05D005786 ORTHO05D006946 1.1e-63 247.7 195 64.1
Actinidia03265 Actinidia chinensis HOM05D005786 ORTHO05D006946 1.4e-61 240.7 183 66.7
SMO203G0033 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 3.4e-60 236.1 297 47.1
QL01p048186 Quercus lobata HOM05D005786 ORTHO05D006946 1.6e-57 227.3 160 70.6
Solyc04g047720.4 Solanum lycopersicum HOM05D005786 ORTHO05D006946 2.7e-57 226.5 184 64.7
Mapoly0069s0067 Marchantia polymorpha HOM05D005786 ORTHO05D006946 4.3e-55 219.2 269 46.1
Eucgr.H01412 Eucalyptus grandis HOM05D005786 ORTHO05D006946 2.9e-51 206.5 141 66.0
vmacro19569 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 8.3e-51 204.9 178 61.8
Haze_04585 Corylus avellana HOM05D005786 ORTHO05D006946 1.6e-49 200.7 151 69.5
SMO357G0021 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 2.3e-48 196.8 296 42.9
Cpa.g.sc123.39 Carica papaya HOM05D005786 ORTHO05D006946 5.1e-48 195.7 222 50.5
FAN02G1732 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.1e-45 188.0 149 62.4
AagrBONN_evm.TU.Sc2ySwM_117.2462 Anthoceros agrestis HOM05D005786 ORTHO05D006946 1.7e-43 180.6 262 38.2
AagrBONN_evm.TU.Sc2ySwM_368.936 Anthoceros agrestis HOM05D005786 ORTHO05D006946 1.1e-42 177.9 299 37.8
Pp3c3_22280 Physcomitrium patens HOM05D005786 ORTHO05D006946 1.2e-41 174.5 273 39.2
CSS0025324 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 4.6e-41 172.6 149 61.7
Haze_04584 Corylus avellana HOM05D005786 ORTHO05D006946 1.6e-38 164.1 114 71.1
CSS0033529 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 7.1e-34 148.7 150 55.3
CARHR216470 Cardamine hirsuta HOM05D005786 ORTHO05D006946 1.0e-32 144.8 111 71.2
AL2G20340 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 5.1e-32 142.5 86 82.6
Cpa.g.sc123.40 Carica papaya HOM05D005786 ORTHO05D006946 3.3e-31 139.8 88 72.7
vmacro19570 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 4.0e-29 132.9 88 77.3
ClCG03G010310 Citrullus lanatus HOM05D005786 ORTHO05D006946 1.3e-27 127.9 118 59.3
Medtr3g103380 Medicago truncatula HOM05D005786 ORTHO05D006946 2.4e-26 123.6 89 60.7
ClCG03G010290 Citrullus lanatus HOM05D005786 ORTHO05D006946 3.5e-25 119.8 125 53.6
BolC2t08267H Brassica oleracea HOM05D005786 ORTHO05D006946 1.5e-20 104.4 95 62.1
BcaB04g17978 Brassica carinata HOM05D005786 ORTHO05D006946 2.6e-20 103.6 154 49.4
Oeu040717.1 Olea europaea HOM05D005786 ORTHO05D006946 1.3e-19 101.3 105 61.9
CBR_g36458 Chara braunii HOM05D005786 ORTHO05D006946 2.9e-19 100.1 275 32.0
Ah.04g159110 Amaranthus hybridus HOM05D005786 ORTHO05D006946 1.8e-16 90.9 104 55.8
MCO14G575 Micromonas commoda HOM05D005786 ORTHO05D006946 1.3e-14 84.7 276 28.3
Eucgr.H01411 Eucalyptus grandis HOM05D005786 ORTHO05D006946 2.1e-14 84.0 78 60.3
PRCOL_00005036 Prasinoderma coloniale HOM05D005786 ORTHO05D006946 1.1e-10 71.6 169 29.6
Actinidia12444 Actinidia chinensis HOM05D005786 ORTHO05D006946 2.8e-06 57.0 62 54.8


User provided reference genes

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