Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G2290 Aethionema arabicum HOM05D006780 ORTHO05D008455 1.4e-139 499.6 254 100.0
Sp5g19750 Schrenkiella parvula HOM05D006780 ORTHO05D008455 5.9e-109 397.9 252 83.7
Thhalv10022468m.g Eutrema salsugineum HOM05D006780 ORTHO05D008455 1.4e-107 393.3 257 80.9
AT2G44870 Arabidopsis thaliana HOM05D006780 ORTHO05D008455 2.1e-106 389.4 254 83.5
BraA02t06361Z Brassica rapa HOM05D006780 ORTHO05D008455 6.1e-106 387.9 259 76.1
C02p21190 Brassica napus HOM05D006780 ORTHO05D008455 7.9e-106 387.5 259 79.2
Carub.0002s1056 Capsella rubella HOM05D006780 ORTHO05D008455 3.0e-105 385.6 262 79.8
A02p13050 Brassica napus HOM05D006780 ORTHO05D008455 3.9e-105 385.2 259 75.3
AL2G19830 Arabidopsis lyrata HOM05D006780 ORTHO05D008455 2.5e-104 382.5 256 76.2
BcaC03g14678 Brassica carinata HOM05D006780 ORTHO05D008455 4.3e-104 381.7 259 75.7
BolC2t08258H Brassica oleracea HOM05D006780 ORTHO05D008455 4.3e-104 381.7 259 75.7
BcaB05g24083 Brassica carinata HOM05D006780 ORTHO05D008455 5.7e-104 381.3 261 80.1
THA.LOC104805709 Tarenaya hassleriana HOM05D006780 ORTHO05D008455 7.4e-104 380.9 263 73.0
CARHR056600 Cardamine hirsuta HOM05D006780 ORTHO05D008455 1.5e-88 330.1 256 71.5
Atru.chr12.2100 Acer truncatum HOM05D006780 ORTHO05D008455 2.0e-88 329.7 241 69.3
Lj3A891T47 Lonicera japonica HOM05D006780 ORTHO05D008455 2.6e-88 329.3 225 70.7
Nitab4.5_0007683g0020 Nicotiana tabacum HOM05D006780 ORTHO05D008455 4.4e-88 328.6 232 69.0
HanXRQChr08g0225871 Helianthus annuus HOM05D006780 ORTHO05D008455 7.4e-88 327.8 224 68.8
Nitab4.5_0000011g0110 Nicotiana tabacum HOM05D006780 ORTHO05D008455 6.3e-87 324.7 232 68.5
Lsat_1_v5_gn_8_3841 Lactuca sativa HOM05D006780 ORTHO05D008455 4.1e-86 322.0 224 68.3
Cfa013613 Carpinus fangiana HOM05D006780 ORTHO05D008455 1.2e-85 320.5 246 65.0
COL.COLO4_34143 Corchorus olitorius HOM05D006780 ORTHO05D008455 1.2e-85 320.5 246 65.4
Thecc.05G208000 Theobroma cacao HOM05D006780 ORTHO05D008455 1.6e-85 320.1 233 68.7
Hma1.2p1_0115F.1_g055870 Hydrangea macrophylla HOM05D006780 ORTHO05D008455 3.5e-85 318.9 221 70.1
Ciclev10012613m.g Citrus clementina HOM05D006780 ORTHO05D008455 4.5e-85 318.5 225 69.8
CSS0033689 Camellia sinensis var. sinensis HOM05D006780 ORTHO05D008455 1.7e-84 316.6 220 68.6
Gohir.A05G389500 Gossypium hirsutum HOM05D006780 ORTHO05D008455 5.0e-84 315.1 225 68.9
MSTRG.17 Avicennia marina HOM05D006780 ORTHO05D008455 6.5e-84 314.7 240 65.4
Cc02_g00520 Coffea canephora HOM05D006780 ORTHO05D008455 6.5e-84 314.7 221 68.8
Gorai.012G029700 Gossypium raimondii HOM05D006780 ORTHO05D008455 6.5e-84 314.7 225 68.9
PGR142G1227 Punica granatum HOM05D006780 ORTHO05D008455 1.1e-83 313.9 246 63.4
Nn6g33682 Nelumbo nucifera HOM05D006780 ORTHO05D008455 1.5e-83 313.5 244 64.3
Hund14300 Selenicereus undatus HOM05D006780 ORTHO05D008455 3.2e-83 312.4 249 63.5
Gohir.D04G027000 Gossypium hirsutum HOM05D006780 ORTHO05D008455 4.2e-83 312.0 225 68.0
SalBow2G3389 Salvia bowleyana HOM05D006780 ORTHO05D008455 4.2e-83 312.0 227 67.8
GSVIVG01024468001 Vitis vinifera HOM05D006780 ORTHO05D008455 9.4e-83 310.8 225 68.4
Sc07g0007970 Simmondsia chinensis HOM05D006780 ORTHO05D008455 2.7e-82 309.3 199 72.4
Dinv29183 Davidia involucrata HOM05D006780 ORTHO05D008455 3.6e-82 308.9 220 68.6
TWI34G0276 Tripterygium wilfordii HOM05D006780 ORTHO05D008455 3.6e-82 308.9 245 63.7
QL09p026712 Quercus lobata HOM05D006780 ORTHO05D008455 6.1e-82 308.1 252 61.9
Eucgr.K00108 Eucalyptus grandis HOM05D006780 ORTHO05D008455 1.0e-81 307.4 242 61.6
Ah.12g058490 Amaranthus hybridus HOM05D006780 ORTHO05D008455 3.0e-81 305.8 244 62.3
Sopen07g001650 Solanum pennellii HOM05D006780 ORTHO05D008455 5.2e-81 305.1 226 65.0
Manes.09G119100 Manihot esculenta HOM05D006780 ORTHO05D008455 6.7e-81 304.7 241 63.9
Actinidia34294 Actinidia chinensis HOM05D006780 ORTHO05D008455 1.5e-80 303.5 224 65.2
Solyc07g005550.4 Solanum lycopersicum HOM05D006780 ORTHO05D008455 1.5e-80 303.5 226 64.6
CiPaw.08G043400 Carya illinoinensis HOM05D006780 ORTHO05D008455 2.0e-80 303.1 246 61.4
TWI60G0503 Tripterygium wilfordii HOM05D006780 ORTHO05D008455 2.6e-80 302.8 245 63.3
Actinidia08727 Actinidia chinensis HOM05D006780 ORTHO05D008455 4.4e-80 302.0 224 66.5
FvH4_7g33420 Fragaria vesca HOM05D006780 ORTHO05D008455 4.4e-80 302.0 224 66.5
FAN01G1241 Fragaria x ananassa HOM05D006780 ORTHO05D008455 4.4e-80 302.0 224 66.5
Migut.F00963 Erythranthe guttata HOM05D006780 ORTHO05D008455 7.5e-80 301.2 226 64.6
FAN03G1919 Fragaria x ananassa HOM05D006780 ORTHO05D008455 9.7e-80 300.8 224 66.1
FAN10G0287 Fragaria x ananassa HOM05D006780 ORTHO05D008455 9.7e-80 300.8 224 66.1
SGA_v2.0_scaffold165G38216 Striga asiatica HOM05D006780 ORTHO05D008455 1.3e-79 300.4 242 62.8
TAR636G2448 Trochodendron aralioides HOM05D006780 ORTHO05D008455 1.7e-79 300.1 230 65.2
FAN10G2247 Fragaria x ananassa HOM05D006780 ORTHO05D008455 2.2e-79 299.7 224 66.1
ECA233G5194 Erigeron canadensis HOM05D006780 ORTHO05D008455 2.8e-79 299.3 203 70.9
CANSAT21G1469 Cannabis sativa HOM05D006780 ORTHO05D008455 3.7e-79 298.9 266 59.8
Gohir.1Z049572 Gossypium hirsutum HOM05D006780 ORTHO05D008455 4.8e-79 298.5 237 64.6
Potri.004G030100 Populus trichocarpa HOM05D006780 ORTHO05D008455 4.8e-79 298.5 221 67.9
Gorai.004G260300 Gossypium raimondii HOM05D006780 ORTHO05D008455 6.3e-79 298.1 225 66.2
vmacro06481 Vaccinium macrocarpon HOM05D006780 ORTHO05D008455 6.3e-79 298.1 266 57.9
RcHm_v2.0_Chr1g0383391 Rosa chinensis HOM05D006780 ORTHO05D008455 1.1e-78 297.4 224 65.2
Sabra04G0017100 Salix brachista HOM05D006780 ORTHO05D008455 1.8e-78 296.6 219 67.6
Gohir.A08G223700 Gossypium hirsutum HOM05D006780 ORTHO05D008455 2.4e-78 296.2 237 64.1
AUR62010478 Chenopodium quinoa HOM05D006780 ORTHO05D008455 3.1e-78 295.8 233 63.9
AUR62030415 Chenopodium quinoa HOM05D006780 ORTHO05D008455 2.0e-77 293.1 225 64.9
VMungo1127G1066 Vigna mungo HOM05D006780 ORTHO05D008455 3.5e-77 292.4 203 70.0
Phvul.011G002600 Phaseolus vulgaris HOM05D006780 ORTHO05D008455 5.9e-77 291.6 227 67.0
MD01G1232400 Malus domestica HOM05D006780 ORTHO05D008455 1.3e-76 290.4 220 66.8
Rhsim03G0219000 Rhododendron simsii HOM05D006780 ORTHO05D008455 1.3e-76 290.4 274 56.2
TAR629G2389 Trochodendron aralioides HOM05D006780 ORTHO05D008455 6.5e-76 288.1 230 61.3
Hma1.2p1_0115F.1_g055860 Hydrangea macrophylla HOM05D006780 ORTHO05D008455 8.5e-76 287.7 246 61.4
CAN.G160.70 Capsicum annuum HOM05D006780 ORTHO05D008455 1.5e-75 287.0 219 63.9
Aqoxy3G02533 Aquilegia oxysepala HOM05D006780 ORTHO05D008455 9.4e-75 284.3 231 61.5
vmacro10178 Vaccinium macrocarpon HOM05D006780 ORTHO05D008455 9.4e-75 284.3 289 52.9
Prupe.2G322900 Prunus persica HOM05D006780 ORTHO05D008455 4.7e-74 282.0 220 65.5
unitig_52.g16857 Utricularia gibba HOM05D006780 ORTHO05D008455 4.7e-74 282.0 220 62.7
DCAR_008997 Daucus carota HOM05D006780 ORTHO05D008455 6.1e-74 281.6 234 59.0
arahy.Tifrunner.gnm1.ann1.T2A0GP Arachis hypogaea HOM05D006780 ORTHO05D008455 1.0e-73 280.8 246 56.5
arahy.Tifrunner.gnm1.ann1.T66758 Arachis hypogaea HOM05D006780 ORTHO05D008455 1.8e-73 280.0 246 56.5
CiPaw.07G182200 Carya illinoinensis HOM05D006780 ORTHO05D008455 5.2e-73 278.5 203 68.0
MD07G1304300 Malus domestica HOM05D006780 ORTHO05D008455 6.8e-73 278.1 220 65.5
Glyma.09G234600 Glycine max HOM05D006780 ORTHO05D008455 1.2e-72 277.3 222 67.6
Rhsim09G0211500 Rhododendron simsii HOM05D006780 ORTHO05D008455 1.7e-71 273.5 271 53.5
Sed0025589 Sechium edule HOM05D006780 ORTHO05D008455 1.7e-71 273.5 203 64.5
Glyma.12G002200 Glycine max HOM05D006780 ORTHO05D008455 2.2e-71 273.1 225 61.8
ClCG01G004850 Citrullus lanatus HOM05D006780 ORTHO05D008455 3.7e-71 272.3 203 64.0
PSO063G3320 Papaver somniferum HOM05D006780 ORTHO05D008455 3.7e-71 272.3 226 61.1
Peaxi162Scf00542g00012 Petunia axillaris HOM05D006780 ORTHO05D008455 4.8e-71 271.9 253 56.1
Lj3g0022672 Lotus japonicus HOM05D006780 ORTHO05D008455 6.3e-71 271.6 248 58.1
PGSC0003DMG400011181 Solanum tuberosum HOM05D006780 ORTHO05D008455 8.3e-71 271.2 301 48.5
Medtr4g033475 Medicago truncatula HOM05D006780 ORTHO05D008455 1.8e-70 270.0 236 58.5
MELO3C005448.2 Cucumis melo HOM05D006780 ORTHO05D008455 2.4e-70 269.6 208 61.5
PSO782G3414 Papaver somniferum HOM05D006780 ORTHO05D008455 3.1e-70 269.2 226 60.2
EL10Ac5g12581 Beta vulgaris HOM05D006780 ORTHO05D008455 3.5e-69 265.8 286 50.3
CsaV3_5G005070 Cucumis sativus L. HOM05D006780 ORTHO05D008455 2.9e-68 262.7 208 60.1
Ca_19681_v3 Cicer arietinum L. HOM05D006780 ORTHO05D008455 5.0e-68 261.9 202 62.4
Psat7g145160 Pisum sativum HOM05D006780 ORTHO05D008455 6.5e-68 261.5 199 64.3
TPR.G31925 Trifolium pratense HOM05D006780 ORTHO05D008455 1.5e-67 260.4 199 64.3
Dinv17273 Davidia involucrata HOM05D006780 ORTHO05D008455 6.1e-66 255.0 162 73.5
CDE02G2736 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 8.0e-66 254.6 220 56.8
CDE11G0765 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 1.2e-61 240.7 220 54.1
CDE02G3388 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 3.5e-61 239.2 240 49.2
Zm00001eb024190 Zea mays HOM05D006780 ORTHO05D008455 4.0e-57 225.7 249 47.0
Duzib128G1164 Durio zibethinus HOM05D006780 ORTHO05D008455 8.9e-57 224.6 236 51.7
Duzib177G1050 Durio zibethinus HOM05D006780 ORTHO05D008455 4.9e-55 218.8 225 51.6
ATR0829G223 Amborella trichopoda HOM05D006780 ORTHO05D008455 6.4e-55 218.4 198 52.5
CDE11G0053 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 6.6e-52 208.4 225 45.8
HPP92_025668 Vanilla planifolia HOM05D006780 ORTHO05D008455 8.6e-52 208.0 225 49.8
SMO301G0031 Selaginella moellendorffii HOM05D006780 ORTHO05D008455 4.1e-38 162.5 195 42.6
Cpa.g.sc39.45 Carica papaya HOM05D006780 ORTHO05D008455 6.6e-36 155.2 120 61.7
Pp3c8_4270 Physcomitrium patens HOM05D006780 ORTHO05D008455 1.2e-32 144.4 189 36.5
Mapoly0133s0055 Marchantia polymorpha HOM05D006780 ORTHO05D008455 8.6e-28 128.3 168 35.7
CBR_g642 Chara braunii HOM05D006780 ORTHO05D008455 5.8e-24 115.5 174 38.5
CSS0031860 Camellia sinensis var. sinensis HOM05D001955 ORTHO05D001917 1.3e-20 104.4 100 55.0
Os10g0569000 Oryza sativa ssp. japonica HOM05D006780 ORTHO05D008455 3.4e-16 89.7 94 52.1
Cre12.g551100 Chlamydomonas reinhardtii HOM05D006780 ORTHO05D008455 2.6e-08 63.5 126 31.7


User provided reference genes

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