Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 4.4e-98 361.3 185 100.0
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 3.5e-79 298.5 183 85.2
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 1.5e-77 293.1 183 82.5
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 2.5e-77 292.4 183 82.0
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 3.3e-77 292.0 179 83.8
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 3.3e-77 292.0 183 83.6
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 4.3e-77 291.6 183 82.0
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 6.2e-76 287.7 184 82.6
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 4.5e-74 281.6 177 84.2
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 1.3e-73 280.0 184 81.0
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 1.7e-73 279.6 184 80.4
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 3.8e-73 278.5 184 81.0
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 8.4e-73 277.3 201 74.6
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 7.1e-72 274.2 185 80.0
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 7.1e-72 274.2 185 80.0
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 1.3e-70 270.0 177 81.4
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 1.7e-65 253.1 184 71.7
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 1.4e-64 250.0 182 69.8
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 1.4e-56 223.4 183 62.8
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 5.5e-56 221.5 183 62.8
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 9.3e-56 220.7 183 61.7
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 1.2e-55 220.3 145 73.8
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 1.2e-55 220.3 145 73.8
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 2.1e-55 219.5 183 63.9
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 3.5e-55 218.8 185 62.2
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 1.0e-54 217.2 184 64.7
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 1.0e-54 217.2 145 72.4
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 1.3e-54 216.9 185 61.6
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 1.8e-54 216.5 147 70.7
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 3.9e-54 215.3 185 63.8
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 3.9e-54 215.3 187 63.6
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 5.1e-54 214.9 164 65.9
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 5.1e-54 214.9 145 71.7
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 5.1e-54 214.9 182 62.6
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 8.7e-54 214.2 184 60.3
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 8.7e-54 214.2 184 63.0
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 8.7e-54 214.2 186 62.4
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 8.7e-54 214.2 183 61.7
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 8.7e-54 214.2 182 63.2
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 8.7e-54 214.2 182 63.2
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 1.9e-53 213.0 183 61.2
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 1.9e-53 213.0 185 60.0
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 2.5e-53 212.6 184 62.0
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 2.5e-53 212.6 183 62.8
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 2.5e-53 212.6 183 61.7
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 2.5e-53 212.6 183 61.7
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 3.3e-53 212.2 183 61.2
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 4.3e-53 211.8 183 59.0
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 4.3e-53 211.8 186 64.0
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 4.3e-53 211.8 156 69.9
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 4.3e-53 211.8 183 61.2
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 5.7e-53 211.5 183 62.3
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 5.7e-53 211.5 144 72.2
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 7.4e-53 211.1 183 61.2
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 7.4e-53 211.1 145 69.7
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 7.4e-53 211.1 187 58.8
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 1.3e-52 210.3 155 67.7
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 1.3e-52 210.3 186 60.2
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 1.3e-52 210.3 183 61.2
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 1.6e-52 209.9 183 60.1
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 1.6e-52 209.9 185 59.5
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 1.6e-52 209.9 163 66.9
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 2.1e-52 209.5 146 71.2
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 2.1e-52 209.5 165 62.4
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 2.1e-52 209.5 183 61.7
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 2.8e-52 209.1 146 70.5
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 3.7e-52 208.8 182 61.0
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 4.8e-52 208.4 154 67.5
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 4.8e-52 208.4 183 59.6
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 8.2e-52 207.6 185 60.0
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.1e-51 207.2 184 60.3
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 1.1e-51 207.2 185 58.9
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 1.1e-51 207.2 146 67.8
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 1.4e-51 206.8 114 82.5
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 1.4e-51 206.8 186 58.6
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.8e-51 206.5 184 59.8
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 1.8e-51 206.5 188 61.7
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 2.4e-51 206.1 182 59.9
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 2.4e-51 206.1 183 60.7
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 2.4e-51 206.1 166 63.3
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 3.1e-51 205.7 185 58.4
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 4.1e-51 205.3 182 59.3
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 4.1e-51 205.3 183 60.7
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 6.9e-51 204.5 184 58.7
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 1.2e-50 203.8 158 65.8
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 1.2e-50 203.8 182 61.0
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 1.2e-50 203.8 157 65.6
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 1.5e-50 203.4 183 59.6
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 4.5e-50 201.8 184 58.7
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 4.5e-50 201.8 184 58.7
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 5.9e-50 201.4 184 60.9
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 7.6e-50 201.1 175 61.1
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 7.6e-50 201.1 114 82.5
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 1.0e-49 200.7 183 59.0
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 2.9e-49 199.1 186 56.5
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 6.5e-49 198.0 192 57.8
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 1.1e-48 197.2 188 59.0
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 1.1e-48 197.2 168 59.5
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 1.1e-48 197.2 115 79.1
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 1.4e-48 196.8 114 80.7
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 1.9e-48 196.4 116 78.4
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 3.2e-48 195.7 144 65.3
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 7.2e-48 194.5 159 60.4
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 2.1e-47 193.0 155 61.9
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 2.1e-47 193.0 182 58.8
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 7.9e-47 191.0 162 59.9
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 3.0e-46 189.1 182 54.4
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 1.1e-45 187.2 184 55.4
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 3.3e-45 185.7 174 56.9
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 5.7e-45 184.9 114 73.7
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 4.8e-44 181.8 131 67.9
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 1.1e-40 170.6 158 57.0
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 1.4e-40 170.2 114 70.2
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 6.1e-39 164.9 190 47.9
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 3.0e-38 162.5 109 67.9
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 4.4e-37 158.7 162 51.2
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 6.3e-36 154.8 109 62.4
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 3.4e-34 149.1 117 55.6
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 5.0e-33 145.2 111 64.0
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 6.5e-33 144.8 162 50.0
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 8.5e-33 144.4 109 57.8
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 1.1e-32 144.1 106 59.4
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 7.0e-19 98.2 57 77.2
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 7.0e-19 98.2 57 77.2
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 2.7e-18 96.3 57 80.7
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 5.9e-18 95.1 138 42.8
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 6.8e-14 81.6 49 73.5
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 2.4e-11 73.2 75 57.3
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 2.4e-11 73.2 105 45.7
BcaNung04295 Brassica carinata HOM05D006027 ORTHO05D007604 2.7e-10 69.7 77 59.7


User provided reference genes

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