Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 7.6e-124 447.2 230 100.0
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 6.5e-115 417.5 228 91.2
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 2.3e-112 409.1 230 88.3
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 5.7e-111 404.4 230 88.7
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 6.3e-110 401.0 230 88.3
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 1.4e-109 399.8 231 87.4
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 4.5e-108 394.8 232 87.1
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 4.5e-108 394.8 232 87.1
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 7.7e-108 394.0 232 86.6
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 2.9e-107 392.1 232 86.2
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 3.9e-104 381.7 230 83.0
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 8.8e-104 380.6 258 78.3
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 4.5e-100 368.2 218 85.3
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 9.1e-93 344.0 207 82.6
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 2.0e-92 342.8 219 78.5
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 4.5e-92 341.7 217 80.2
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 5.9e-92 341.3 207 81.6
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 7.7e-92 340.9 217 80.2
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.3e-91 340.1 217 78.3
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 1.3e-91 340.1 217 77.4
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 1.7e-91 339.7 217 79.3
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 2.2e-91 339.3 229 74.2
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 2.2e-91 339.3 229 74.2
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 3.8e-91 338.6 217 77.9
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 6.5e-91 337.8 217 77.4
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 6.5e-91 337.8 215 79.1
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 8.5e-91 337.4 221 75.1
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 8.5e-91 337.4 221 75.1
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 1.1e-90 337.0 207 80.7
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 1.4e-90 336.7 207 79.7
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 2.5e-90 335.9 207 81.2
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 3.2e-90 335.5 208 79.3
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 3.2e-90 335.5 215 78.6
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 5.5e-90 334.7 245 71.4
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 5.5e-90 334.7 245 71.4
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 5.5e-90 334.7 206 80.1
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 5.5e-90 334.7 217 77.9
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 5.5e-90 334.7 217 76.0
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 7.2e-90 334.3 217 77.0
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 9.4e-90 334.0 209 79.9
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 1.2e-89 333.6 217 76.0
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 1.2e-89 333.6 217 76.0
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 1.6e-89 333.2 207 78.3
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 2.1e-89 332.8 217 76.0
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 2.7e-89 332.4 207 79.7
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.7e-89 332.4 207 77.8
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.7e-89 332.4 215 77.2
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 3.6e-89 332.0 208 78.4
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 4.7e-89 331.6 215 76.7
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 4.7e-89 331.6 218 77.5
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 6.1e-89 331.3 215 77.2
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 8.0e-89 330.9 212 77.4
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.0e-88 330.5 229 74.2
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.0e-88 330.5 229 74.2
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 2.3e-88 329.3 217 74.7
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 3.0e-88 328.9 207 78.3
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 3.0e-88 328.9 229 73.8
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 5.2e-88 328.2 217 75.6
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 5.2e-88 328.2 210 79.5
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 6.7e-88 327.8 207 79.2
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 8.8e-88 327.4 211 76.3
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 1.1e-87 327.0 209 78.9
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 1.1e-87 327.0 209 78.9
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 1.1e-87 327.0 216 77.8
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 1.5e-87 326.6 207 78.7
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 2.6e-87 325.9 207 77.3
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 3.3e-87 325.5 226 71.2
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 4.4e-87 325.1 211 77.7
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 5.7e-87 324.7 233 72.5
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 9.7e-87 323.9 210 76.2
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 1.3e-86 323.6 207 77.3
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 2.8e-86 322.4 195 81.0
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 1.4e-85 320.1 209 76.1
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 5.3e-85 318.2 193 79.8
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 2.0e-84 316.2 203 76.8
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 1.3e-83 313.5 193 80.3
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 1.7e-83 313.2 206 74.8
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 2.2e-83 312.8 206 76.2
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 1.9e-82 309.7 195 80.5
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 3.2e-82 308.9 206 74.3
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 3.2e-82 308.9 199 77.4
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 1.6e-81 306.6 228 71.1
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 6.1e-81 304.7 217 73.7
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 5.2e-80 301.6 206 72.8
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 9.7e-79 297.4 193 74.6
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.2e-78 296.2 217 70.0
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 2.0e-76 289.7 231 68.4
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 7.7e-76 287.7 183 77.0
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 1.9e-74 283.1 206 68.4
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 1.2e-73 280.4 206 66.0
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 3.0e-72 275.8 195 73.3
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 4.4e-71 271.9 213 66.7
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 1.7e-70 270.0 206 65.5
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 1.1e-69 267.3 206 65.0
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 5.4e-69 265.0 172 79.1
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.7e-67 260.0 215 65.1
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 2.3e-67 259.6 169 77.5
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 3.0e-64 249.2 172 75.0
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 8.9e-64 247.7 202 66.8
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 2.6e-63 246.1 222 61.3
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 2.2e-62 243.0 206 62.1
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 3.1e-61 239.2 153 80.4
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 5.2e-56 221.9 145 73.8
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 1.4e-53 213.8 138 79.7
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 2.7e-52 209.5 138 79.0
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 5.0e-51 205.3 112 92.9
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 3.4e-47 192.6 110 84.5
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 1.1e-45 187.6 194 56.2
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 2.8e-41 172.9 138 65.9
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 4.7e-41 172.2 120 72.5
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 2.3e-35 153.3 217 46.5
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 1.2e-33 147.5 114 66.7
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 2.8e-33 146.4 108 69.4
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 1.3e-30 137.5 204 37.7
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 5.4e-29 132.1 207 38.2
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 2.7e-28 129.8 101 69.3
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 4.6e-28 129.0 101 68.3
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 5.1e-27 125.6 193 37.3
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 2.3e-19 100.1 81 65.4
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 4.3e-18 95.9 78 56.4
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 2.8e-17 93.2 76 61.8
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 9.9e-15 84.7 51 72.5


User provided reference genes

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