Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 5.3e-147 524.2 248 100.0
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 4.5e-122 441.4 248 82.7
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 6.1e-119 431.0 250 81.6
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 6.7e-118 427.6 260 77.3
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 1.2e-114 416.8 260 75.4
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 1.6e-114 416.4 260 75.4
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 3.8e-113 411.8 249 79.1
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 1.2e-111 406.8 249 78.3
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 2.1e-111 406.0 249 78.3
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 2.7e-111 405.6 274 70.8
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 2.0e-106 389.4 249 77.1
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 5.0e-105 384.8 241 74.7
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 5.0e-105 384.8 241 74.7
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 4.4e-101 371.7 241 73.9
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 7.5e-93 344.4 209 77.5
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 7.5e-93 344.4 214 76.2
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 1.1e-88 330.5 219 73.5
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 1.9e-88 329.7 219 73.1
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 3.0e-81 305.8 241 65.6
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 2.5e-80 302.8 249 59.8
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 3.3e-80 302.4 233 61.4
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 3.3e-80 302.4 249 58.2
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 3.3e-80 302.4 247 59.1
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 8.0e-79 297.7 242 57.0
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 2.3e-78 296.2 250 57.6
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 4.0e-78 295.4 251 58.6
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 2.0e-77 293.1 251 58.2
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 2.6e-77 292.7 252 57.1
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 2.6e-77 292.7 252 58.3
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 4.4e-77 292.0 250 58.4
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 5.8e-77 291.6 249 57.0
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 7.5e-77 291.2 234 59.4
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 9.8e-77 290.8 247 57.1
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 1.3e-76 290.4 251 57.4
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 1.3e-76 290.4 246 56.5
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 1.7e-76 290.0 248 57.3
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 1.7e-76 290.0 251 58.2
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 6.4e-76 288.1 253 56.9
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 1.1e-75 287.3 253 56.9
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 1.9e-75 286.6 244 59.4
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 1.9e-75 286.6 250 56.0
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 3.2e-75 285.8 238 57.6
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 4.1e-75 285.4 213 62.4
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 1.2e-74 283.9 196 64.3
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 1.6e-74 283.5 254 56.7
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 2.1e-74 283.1 249 55.8
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 2.7e-74 282.7 247 56.7
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 4.6e-74 282.0 219 63.0
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 1.7e-73 280.0 202 64.4
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 2.3e-73 279.6 246 55.3
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 3.0e-73 279.3 252 56.0
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 3.0e-73 279.3 239 56.1
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 5.1e-73 278.5 266 54.1
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 6.6e-73 278.1 199 63.3
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 1.1e-72 277.3 249 55.4
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 1.5e-72 276.9 235 57.0
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 3.3e-72 275.8 271 52.0
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 1.2e-71 273.9 254 56.3
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 1.2e-71 273.9 244 57.8
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 2.1e-71 273.1 260 54.6
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 3.6e-71 272.3 251 53.8
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 3.6e-71 272.3 251 53.8
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 3.6e-71 272.3 234 56.4
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 4.7e-71 271.9 238 57.6
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 4.7e-71 271.9 203 62.1
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 4.7e-71 271.9 197 63.5
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 6.2e-71 271.6 256 55.5
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 1.1e-70 270.8 188 66.0
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 1.4e-70 270.4 194 62.9
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 1.8e-70 270.0 257 55.3
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 1.8e-70 270.0 224 58.5
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 4.0e-70 268.9 199 62.8
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 4.0e-70 268.9 241 55.6
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 1.5e-69 266.9 228 57.0
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 2.6e-69 266.2 191 63.9
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 2.6e-69 266.2 223 57.0
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 3.4e-69 265.8 234 55.6
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 4.4e-69 265.4 240 54.6
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 5.8e-69 265.0 206 60.7
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 9.9e-69 264.2 241 53.9
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 1.3e-68 263.8 269 50.9
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 1.7e-68 263.5 261 53.6
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 3.7e-68 262.3 208 60.1
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 4.9e-68 261.9 249 53.4
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 4.9e-68 261.9 228 56.6
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 6.4e-68 261.5 249 53.8
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 1.4e-67 260.4 233 53.6
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 4.1e-67 258.8 227 56.4
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 9.2e-67 257.7 265 50.9
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 1.7e-65 253.4 176 67.0
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 2.3e-65 253.1 176 67.0
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 2.3e-65 253.1 176 67.0
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 3.0e-65 252.7 207 58.0
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 3.9e-65 252.3 176 67.0
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 6.6e-65 251.5 256 52.7
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 1.9e-64 250.0 233 54.5
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 3.3e-64 249.2 238 54.2
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 3.3e-64 249.2 228 53.5
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 1.6e-63 246.9 256 48.8
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 1.1e-62 244.2 244 51.2
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 4.0e-62 242.3 244 50.8
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 1.2e-61 240.7 219 54.8
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 1.4e-59 233.8 208 55.8
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 4.2e-59 232.3 234 50.0
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 1.2e-58 230.7 213 54.9
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 2.7e-58 229.6 190 55.8
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 1.9e-56 223.4 226 51.3
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 8.1e-55 218.0 175 60.0
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 9.9e-53 211.1 202 52.0
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 2.2e-52 209.9 160 60.0
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 1.1e-51 207.6 126 69.8
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 1.2e-50 204.1 146 61.0
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 3.6e-47 192.6 159 57.2
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 6.2e-39 165.2 122 58.2
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 9.3e-35 151.4 124 53.2
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 2.1e-34 150.2 121 54.5
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 3.9e-33 146.0 82 68.3
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 7.1e-27 125.2 78 60.3
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 1.0e-25 121.3 82 61.0
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 1.2e-13 81.3 178 34.3


User provided reference genes

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