Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G20840 Aethionema arabicum HOM05D006378 ORTHO05D007959 0.0e+00 1750.3 852 100.0
Sp7g06720 Schrenkiella parvula HOM05D006378 ORTHO05D007959 0.0e+00 1468.8 860 83.4
Thhalv10003638m.g Eutrema salsugineum HOM05D006378 ORTHO05D007959 0.0e+00 1457.6 865 81.7
C04p44250 Brassica napus HOM05D006378 ORTHO05D007959 0.0e+00 1435.6 861 81.2
Carub.0002s2445 Capsella rubella HOM05D006378 ORTHO05D007959 0.0e+00 1435.6 861 81.0
BolC4t25998H Brassica oleracea HOM05D006378 ORTHO05D007959 0.0e+00 1435.2 861 81.2
BcaB06g26949 Brassica carinata HOM05D006378 ORTHO05D007959 0.0e+00 1434.5 861 81.4
BcaC02g09569 Brassica carinata HOM05D006378 ORTHO05D007959 0.0e+00 1434.1 861 81.1
BraA04t16723Z Brassica rapa HOM05D006378 ORTHO05D007959 0.0e+00 1428.3 862 81.0
AT1G77550 Arabidopsis thaliana HOM05D006378 ORTHO05D007959 0.0e+00 1427.5 860 80.7
A04p10600 Brassica napus HOM05D006378 ORTHO05D007959 0.0e+00 1427.2 862 81.0
AL2G37770 Arabidopsis lyrata HOM05D006378 ORTHO05D007959 0.0e+00 1423.7 861 80.7
THA.LOC104826591 Tarenaya hassleriana HOM05D006378 ORTHO05D007959 0.0e+00 1399.0 860 78.7
Thecc.09G076800 Theobroma cacao HOM05D006378 ORTHO05D007959 0.0e+00 1280.0 859 70.7
Cpa.g.sc28.38 Carica papaya HOM05D006378 ORTHO05D007959 0.0e+00 1270.4 858 71.1
Duzib168G0703 Durio zibethinus HOM05D006378 ORTHO05D007959 0.0e+00 1266.9 859 70.8
Gohir.A06G076500 Gossypium hirsutum HOM05D006378 ORTHO05D007959 0.0e+00 1261.5 858 70.5
Gohir.D06G075500 Gossypium hirsutum HOM05D006378 ORTHO05D007959 0.0e+00 1257.3 858 70.2
Gorai.010G088400 Gossypium raimondii HOM05D006378 ORTHO05D007959 0.0e+00 1256.1 858 70.2
Manes.03G040400 Manihot esculenta HOM05D006378 ORTHO05D007959 0.0e+00 1252.7 863 70.8
Ciclev10007418m.g Citrus clementina HOM05D006378 ORTHO05D007959 0.0e+00 1249.6 867 69.4
Potri.006G141900 Populus trichocarpa HOM05D006378 ORTHO05D007959 0.0e+00 1244.6 868 69.8
Sabra06G0111000 Salix brachista HOM05D006378 ORTHO05D007959 0.0e+00 1231.5 868 69.2
CANSAT56G1041 Cannabis sativa HOM05D006378 ORTHO05D007959 0.0e+00 1222.6 862 68.1
Eucgr.C03329 Eucalyptus grandis HOM05D006378 ORTHO05D007959 0.0e+00 1218.8 866 67.8
Rhsim03G0227500 Rhododendron simsii HOM05D006378 ORTHO05D007959 0.0e+00 1216.8 865 67.6
Eucgr.C03264 Eucalyptus grandis HOM05D006378 ORTHO05D007959 0.0e+00 1215.3 866 67.8
GSVIVG01015082001 Vitis vinifera HOM05D006378 ORTHO05D007959 0.0e+00 1213.4 864 67.5
CSS0003361 Camellia sinensis var. sinensis HOM05D006378 ORTHO05D007959 0.0e+00 1211.8 861 68.1
QL11p000773 Quercus lobata HOM05D006378 ORTHO05D007959 0.0e+00 1211.1 868 68.3
CSS0014220 Camellia sinensis var. sinensis HOM05D006378 ORTHO05D007959 0.0e+00 1210.3 861 68.1
MD15G1217600 Malus domestica HOM05D006378 ORTHO05D007959 0.0e+00 1209.9 863 68.0
Prupe.7G198800 Prunus persica HOM05D006378 ORTHO05D007959 0.0e+00 1207.6 861 67.8
Cc06_g12180 Coffea canephora HOM05D006378 ORTHO05D007959 0.0e+00 1207.2 864 66.7
TAR383G0342 Trochodendron aralioides HOM05D006378 ORTHO05D007959 0.0e+00 1206.8 866 67.4
Sc08g0008890 Simmondsia chinensis HOM05D006378 ORTHO05D007959 0.0e+00 1205.7 860 67.3
TWI34G0472 Tripterygium wilfordii HOM05D006378 ORTHO05D007959 0.0e+00 1205.7 859 67.6
Cfa002988 Carpinus fangiana HOM05D006378 ORTHO05D007959 0.0e+00 1205.3 862 68.0
vmacro06342 Vaccinium macrocarpon HOM05D006378 ORTHO05D007959 0.0e+00 1204.5 865 67.3
VMungo1309G1044 Vigna mungo HOM05D006378 ORTHO05D007959 0.0e+00 1201.8 858 67.4
TPR.G28586 Trifolium pratense HOM05D006378 ORTHO05D007959 0.0e+00 1200.7 865 67.4
ClCG03G015080 Citrullus lanatus HOM05D006378 ORTHO05D007959 0.0e+00 1199.9 877 65.9
Medtr2g041640 Medicago truncatula HOM05D006378 ORTHO05D007959 0.0e+00 1199.1 863 67.4
MELO3C015521.2 Cucumis melo HOM05D006378 ORTHO05D007959 0.0e+00 1198.3 871 66.1
CARHR071080 Cardamine hirsuta HOM05D006378 ORTHO05D007959 0.0e+00 1197.6 688 83.7
RcHm_v2.0_Chr2g0094931 Rosa chinensis HOM05D006378 ORTHO05D007959 0.0e+00 1195.6 864 67.4
CsaV3_1G041050 Cucumis sativus L. HOM05D006378 ORTHO05D007959 0.0e+00 1194.1 873 66.2
Glyma.15G177600 Glycine max HOM05D006378 ORTHO05D007959 0.0e+00 1191.8 862 66.2
MSTRG.19459 Avicennia marina HOM05D006378 ORTHO05D007959 0.0e+00 1189.5 860 65.8
Lalb_Chr08g0232591 Lupinus albus HOM05D006378 ORTHO05D007959 0.0e+00 1188.3 864 66.7
Ca_02206_v3 Cicer arietinum L. HOM05D006378 ORTHO05D007959 0.0e+00 1186.4 863 66.3
Hma1.2p1_0179F.1_g079520 Hydrangea macrophylla HOM05D006378 ORTHO05D007959 0.0e+00 1185.6 874 66.2
Sed0026053 Sechium edule HOM05D006378 ORTHO05D007959 0.0e+00 1184.9 870 65.6
Migut.J00925 Erythranthe guttata HOM05D006378 ORTHO05D007959 0.0e+00 1183.7 864 65.5
PGR044G1219 Punica granatum HOM05D006378 ORTHO05D007959 0.0e+00 1183.7 870 65.7
Phvul.009G227300 Phaseolus vulgaris HOM05D006378 ORTHO05D007959 0.0e+00 1182.9 861 66.6
FAN26G1418 Fragaria x ananassa HOM05D006378 ORTHO05D007959 0.0e+00 1177.9 862 65.5
Lj6g0025012 Lotus japonicus HOM05D006378 ORTHO05D007959 0.0e+00 1176.4 859 66.1
Psat1g134280 Pisum sativum HOM05D006378 ORTHO05D007959 0.0e+00 1174.8 860 65.8
FAN19G1878 Fragaria x ananassa HOM05D006378 ORTHO05D007959 0.0e+00 1174.1 886 64.6
FAN26G3001 Fragaria x ananassa HOM05D006378 ORTHO05D007959 0.0e+00 1174.1 864 65.4
Nitab4.5_0009436g0010 Nicotiana tabacum HOM05D006378 ORTHO05D007959 0.0e+00 1173.7 865 65.5
Nitab4.5_0000343g0150 Nicotiana tabacum HOM05D006378 ORTHO05D007959 0.0e+00 1171.4 865 65.4
Hund08780 Selenicereus undatus HOM05D006378 ORTHO05D007959 0.0e+00 1171.4 860 66.5
Dinv42394 Davidia involucrata HOM05D006378 ORTHO05D007959 0.0e+00 1170.2 867 66.6
Haze_26013 Corylus avellana HOM05D006378 ORTHO05D007959 0.0e+00 1167.9 863 66.3
SGA_v2.0_scaffold91G28112 Striga asiatica HOM05D006378 ORTHO05D007959 0.0e+00 1167.5 861 65.0
Oeu035912.1 Olea europaea HOM05D006378 ORTHO05D007959 0.0e+00 1166.4 858 64.9
EL10Ac8g19061 Beta vulgaris HOM05D006378 ORTHO05D007959 0.0e+00 1165.6 865 65.5
Sopen07g021350 Solanum pennellii HOM05D006378 ORTHO05D007959 0.0e+00 1165.6 862 66.1
Lj7C687T7 Lonicera japonica HOM05D006378 ORTHO05D007959 0.0e+00 1165.2 872 65.4
DCAR_011949 Daucus carota HOM05D006378 ORTHO05D007959 0.0e+00 1163.7 866 64.4
Aqoxy7G04130 Aquilegia oxysepala HOM05D006378 ORTHO05D007959 0.0e+00 1163.3 869 65.1
arahy.Tifrunner.gnm1.ann1.LZ43MP Arachis hypogaea HOM05D006378 ORTHO05D007959 0.0e+00 1156.7 860 65.2
SalBow6G1560 Salvia bowleyana HOM05D006378 ORTHO05D007959 0.0e+00 1155.6 861 65.2
Solyc07g041870.3 Solanum lycopersicum HOM05D006378 ORTHO05D007959 0.0e+00 1153.3 862 65.4
arahy.Tifrunner.gnm1.ann1.CBKZ0V Arachis hypogaea HOM05D006378 ORTHO05D007959 0.0e+00 1152.5 855 65.5
Nn8g38637 Nelumbo nucifera HOM05D006378 ORTHO05D007959 0.0e+00 1150.2 863 64.5
HanXRQChr06g0178331 Helianthus annuus HOM05D006378 ORTHO05D007959 0.0e+00 1149.0 864 64.7
AUR62028935 Chenopodium quinoa HOM05D006378 ORTHO05D007959 0.0e+00 1145.6 873 64.3
Ah.09g231620 Amaranthus hybridus HOM05D006378 ORTHO05D007959 0.0e+00 1144.8 860 64.8
MBI19_g16222_MAGBIO Magnolia biondii HOM05D006378 ORTHO05D007959 0.0e+00 1139.8 869 64.0
PSO135G0915 Papaver somniferum HOM05D006378 ORTHO05D007959 0.0e+00 1139.8 873 62.8
AUR62025249 Chenopodium quinoa HOM05D006378 ORTHO05D007959 0.0e+00 1139.0 880 63.4
PGSC0003DMG400019029 Solanum tuberosum HOM05D006378 ORTHO05D007959 0.0e+00 1139.0 862 65.0
Lsat_1_v5_gn_8_86460 Lactuca sativa HOM05D006378 ORTHO05D007959 0.0e+00 1138.3 861 64.6
ECA236G3597 Erigeron canadensis HOM05D006378 ORTHO05D007959 0.0e+00 1132.1 864 63.4
Os03g0179000 Oryza sativa ssp. japonica HOM05D006378 ORTHO05D007959 0.0e+00 1094.0 865 61.5
Peaxi162Scf00127g01816 Petunia axillaris HOM05D006378 ORTHO05D007959 0.0e+00 1091.3 860 63.3
CAN.G62.5 Capsicum annuum HOM05D006378 ORTHO05D007959 2.0e-310 1068.9 825 64.5
HPP92_002164 Vanilla planifolia HOM05D006378 ORTHO05D007959 7.3e-305 1050.4 841 62.1
COL.COLO4_18097 Corchorus olitorius HOM05D006378 ORTHO05D007959 4.4e-302 1041.2 848 61.8
ATR0598G254 Amborella trichopoda HOM05D006378 ORTHO05D007959 7.1e-300 1033.9 848 58.1
CiPaw.03G206400 Carya illinoinensis HOM05D006378 ORTHO05D007959 2.7e-299 1031.9 745 67.7
Atru.chr7.1707 Acer truncatum HOM05D006378 ORTHO05D007959 3.6e-296 1021.5 647 74.0
FvH4_1g08650 Fragaria vesca HOM05D006378 ORTHO05D007959 1.5e-294 1016.1 695 68.9
unitig_578.g15677 Utricularia gibba HOM05D006378 ORTHO05D007959 6.0e-291 1004.2 859 57.6
Mapoly0113s0055 Marchantia polymorpha HOM05D006378 ORTHO05D007959 6.4e-285 984.2 857 55.7
AagrBONN_evm.TU.Sc2ySwM_117.2900 Anthoceros agrestis HOM05D006378 ORTHO05D007959 2.5e-273 945.7 864 53.6
SMO174G0008 Selaginella moellendorffii HOM05D006378 ORTHO05D007959 7.4e-273 944.1 850 54.1
Pp3c6_19960 Physcomitrium patens HOM05D006378 ORTHO05D007959 3.4e-270 935.3 866 52.8
CBR_g12041 Chara braunii HOM05D006378 ORTHO05D007959 2.7e-190 669.8 772 46.0
Actinidia38480 Actinidia chinensis HOM05D006378 ORTHO05D007959 3.0e-157 560.1 388 68.6
Zm00001eb401890 Zea mays HOM05D006378 ORTHO05D007959 3.7e-147 526.6 474 55.5
SEGI_03485 Sequoiadendron giganteum HOM05D006378 ORTHO05D007959 2.6e-129 467.2 460 53.9
FAN28G1488 Fragaria x ananassa HOM05D006378 ORTHO05D007959 4.5e-113 413.3 359 57.7
CAN.G81.12 Capsicum annuum HOM05D006378 ORTHO05D007959 7.8e-73 279.6 307 53.1
SEGI_37917 Sequoiadendron giganteum HOM05D006378 ORTHO05D007959 1.5e-63 248.8 168 69.6
CAN.G81.10 Capsicum annuum HOM05D006378 ORTHO05D007959 3.4e-60 237.7 206 56.3
Psat7g020000 Pisum sativum HOM05D006378 ORTHO05D007959 5.1e-48 197.2 176 56.8
CAN.G81.11 Capsicum annuum HOM05D006378 ORTHO05D007959 2.1e-41 175.3 195 49.7
CDE05G1577 Ceratophyllum demersum HOM05D006378 ORTHO05D007959 5.8e-36 157.1 168 47.6
SHI02337 Sapria himalayana HOM05D006378 ORTHO05D007959 2.8e-30 138.3 149 49.7
CDE05G1890 Ceratophyllum demersum HOM05D006378 ORTHO05D007959 1.1e-29 136.3 102 60.8
Actinidia29933 Actinidia chinensis HOM05D006378 ORTHO05D007959 4.2e-26 124.4 85 69.4
RcHm_v2.0_Chr2g0095091 Rosa chinensis HOM05D006378 ORTHO05D007959 5.7e-23 114.0 69 72.5
RcHm_v2.0_Chr2g0095081 Rosa chinensis HOM05D006378 ORTHO05D007959 2.2e-22 112.1 88 63.6
SHI02335 Sapria himalayana HOM05D006378 ORTHO05D007959 4.5e-20 104.4 87 57.5
RcHm_v2.0_Chr2g0095101 Rosa chinensis HOM05D006378 ORTHO05D007959 1.7e-19 102.4 81 59.3
Actinidia29932 Actinidia chinensis HOM05D006378 ORTHO05D007959 2.9e-19 101.7 109 54.1
SHI02336 Sapria himalayana HOM05D006378 ORTHO05D007959 9.4e-18 96.7 111 48.6
Cre06.g300250 Chlamydomonas reinhardtii HOM05D008676 ORTHO05D010936 3.1e-13 81.6 197 26.4
SHI02338 Sapria himalayana HOM05D006378 ORTHO05D007959 6.9e-13 80.5 70 57.1
CBR_g54068 Chara braunii HOM05D008676 ORTHO05D010936 1.2e-12 79.7 239 25.9
MCO03G450 Micromonas commoda HOM05D008676 ORTHO05D010936 1.0e-11 76.6 302 23.2
MCO11G220 Micromonas commoda HOM05D008676 ORTHO05D010936 1.7e-11 75.9 285 22.8
Mapoly0012s0012 Marchantia polymorpha HOM05D008676 ORTHO05D010936 8.5e-11 73.6 235 25.5
AagrBONN_evm.TU.Sc2ySwM_228.857 Anthoceros agrestis HOM05D008676 ORTHO05D010936 2.5e-10 72.0 252 26.2
Cre17.g699500 Chlamydomonas reinhardtii HOM05D008676 ORTHO05D010936 5.5e-10 70.9 319 24.1
MCO05G481 Micromonas commoda HOM05D008676 ORTHO05D010936 2.1e-09 68.9 289 26.0
SMO117G0188 Selaginella moellendorffii HOM05D008676 ORTHO05D010936 2.1e-09 68.9 301 23.3
SMO348G0088 Selaginella moellendorffii HOM05D008676 ORTHO05D010936 3.6e-09 68.2 303 25.1
SMO337G0080 Selaginella moellendorffii HOM05D008676 ORTHO05D010936 4.7e-09 67.8 235 27.2
Pp3c1_16240 Physcomitrium patens HOM05D008676 ORTHO05D010936 5.1e-08 64.3 216 25.9
PRCOL_00004385 Prasinoderma coloniale HOM05D008676 ORTHO05D010936 5.1e-08 64.3 238 22.7
Cre02.g117350 Chlamydomonas reinhardtii HOM05D008676 ORTHO05D010936 3.3e-07 61.6 210 23.3
MCO11G738 Micromonas commoda HOM05D008676 ORTHO05D010936 9.7e-07 60.1 306 26.5
Pp3c6_25370 Physcomitrium patens HOM05D008676 ORTHO05D010936 1.3e-06 59.7 299 25.1
Actinidia29934 Actinidia chinensis HOM05D006378 ORTHO05D007959 1.7e-06 59.3 32 75.0
AagrBONN_evm.TU.Sc2ySwM_369.291 Anthoceros agrestis HOM05D008676 ORTHO05D010936 2.8e-06 58.5 167 25.1


User provided reference genes

Program Settings