Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 9.4e-90 333.6 177 100.0
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 7.0e-85 317.4 177 93.8
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 9.1e-85 317.0 177 93.8
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 1.3e-83 313.2 175 91.4
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 5.0e-83 311.2 177 93.2
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 3.6e-81 305.1 178 92.1
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 8.0e-81 303.9 175 91.4
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 1.0e-80 303.5 177 87.6
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 5.2e-80 301.2 177 88.7
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 5.2e-80 301.2 177 88.7
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 7.5e-79 297.4 177 85.9
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 9.8e-79 297.0 177 88.1
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 9.8e-79 297.0 177 88.1
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 1.7e-78 296.2 177 87.6
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 2.8e-78 295.4 177 87.6
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 7.0e-77 290.8 177 85.9
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 9.2e-77 290.4 177 85.9
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 5.6e-74 281.2 175 82.9
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 1.6e-73 279.6 175 80.6
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 2.3e-72 275.8 175 80.0
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 3.1e-72 275.4 175 80.0
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 8.9e-72 273.9 176 80.7
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.2e-71 273.5 175 81.1
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 2.0e-71 272.7 177 78.0
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 2.6e-71 272.3 176 80.7
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 3.4e-71 271.9 176 77.3
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 5.8e-71 271.2 163 85.9
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 1.3e-70 270.0 177 78.0
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 1.3e-70 270.0 175 78.9
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 3.7e-70 268.5 175 75.4
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 6.4e-70 267.7 175 78.3
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 6.4e-70 267.7 175 77.1
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 6.4e-70 267.7 175 78.3
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 2.4e-69 265.8 164 80.5
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 3.2e-69 265.4 175 75.4
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 4.1e-69 265.0 159 83.0
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 4.1e-69 265.0 175 75.4
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 4.1e-69 265.0 175 75.4
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 9.2e-69 263.8 177 75.1
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 2.0e-68 262.7 175 75.4
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 2.0e-68 262.7 175 74.9
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 2.0e-68 262.7 175 74.9
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.7e-68 262.3 174 77.6
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 3.5e-68 261.9 174 77.6
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 3.5e-68 261.9 174 77.6
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.5e-68 261.9 175 75.4
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 7.8e-68 260.8 175 74.9
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 7.8e-68 260.8 178 74.7
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 1.7e-67 259.6 175 73.7
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 2.3e-67 259.2 175 73.7
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 2.3e-67 259.2 175 76.0
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 3.0e-67 258.8 175 76.6
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 3.0e-67 258.8 179 76.0
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 3.9e-67 258.5 176 75.6
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 8.6e-67 257.3 152 83.6
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 1.1e-66 256.9 159 81.1
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 1.9e-66 256.1 167 79.0
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 3.3e-66 255.4 175 74.3
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 3.3e-66 255.4 178 73.0
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 3.3e-66 255.4 178 73.0
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 3.3e-66 255.4 178 73.0
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 4.3e-66 255.0 173 75.1
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 9.5e-66 253.8 173 74.0
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 9.5e-66 253.8 164 75.0
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 1.2e-65 253.4 166 78.3
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 1.6e-65 253.1 176 72.7
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 1.6e-65 253.1 177 71.8
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 1.6e-65 253.1 176 73.9
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 2.8e-65 252.3 167 74.9
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 2.8e-65 252.3 175 73.1
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 2.8e-65 252.3 177 74.0
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 6.2e-65 251.1 175 73.7
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 6.2e-65 251.1 175 72.0
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 1.4e-64 250.0 177 72.9
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 2.3e-64 249.2 172 76.2
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 2.3e-64 249.2 178 71.3
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 2.3e-64 249.2 177 73.4
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 2.3e-64 249.2 177 73.4
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 3.1e-64 248.8 176 72.7
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 4.0e-64 248.4 175 74.9
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 4.0e-64 248.4 149 81.9
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 5.2e-64 248.1 176 72.2
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 5.2e-64 248.1 177 71.8
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 5.2e-64 248.1 180 70.6
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 6.8e-64 247.7 151 81.5
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 8.9e-64 247.3 151 80.1
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.5e-63 246.5 152 79.6
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 3.4e-63 245.4 175 73.1
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 4.4e-63 245.0 175 72.6
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 7.5e-63 244.2 175 71.4
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 9.8e-63 243.8 177 70.1
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 6.4e-62 241.1 151 78.8
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 8.3e-62 240.7 152 78.9
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 1.1e-61 240.4 151 78.8
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 5.4e-61 238.0 142 81.7
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 9.2e-61 237.3 176 69.3
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 1.6e-60 236.5 181 68.5
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 2.1e-60 236.1 175 70.3
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 3.5e-60 235.3 179 68.7
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 1.3e-59 233.4 174 69.5
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 1.7e-59 233.0 164 72.0
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 1.7e-59 233.0 171 67.8
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 5.1e-59 231.5 175 68.0
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 5.6e-58 228.0 156 74.4
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 1.2e-57 226.9 167 69.5
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 1.6e-57 226.5 156 72.4
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 1.8e-56 223.0 145 77.2
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.3e-54 216.9 137 75.9
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 5.4e-53 211.5 152 71.1
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 1.1e-50 203.8 129 78.3
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 1.9e-50 203.0 153 68.0
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 2.8e-49 199.1 118 85.6
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 1.8e-48 196.4 120 81.7
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 4.0e-48 195.3 154 64.9
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 5.2e-48 194.9 129 76.0
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 1.5e-47 193.4 151 60.3
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 9.9e-47 190.7 129 82.2
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 1.9e-45 186.4 121 80.2
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 5.4e-45 184.9 152 60.5
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 3.5e-44 182.2 108 84.3
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 6.6e-43 177.9 129 65.1
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 1.3e-41 173.7 106 79.2
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 3.6e-41 172.2 106 78.3
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 1.5e-31 140.2 89 76.4
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 3.5e-28 129.0 121 49.6
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 2.4e-16 89.7 106 51.9
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 8.7e-11 71.2 120 44.2


User provided reference genes

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