Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G20640 Aethionema arabicum HOM05D001925 ORTHO05D005701 7.2e-284 979.9 506 100.0
AL7G22330 Arabidopsis lyrata HOM05D001925 ORTHO05D005701 1.9e-220 769.2 536 75.0
AT4G29910 Arabidopsis thaliana HOM05D001925 ORTHO05D005701 8.7e-213 743.8 534 72.8
Sp5g05460 Schrenkiella parvula HOM05D001925 ORTHO05D005701 7.3e-212 740.7 533 72.6
BcaB02g07621 Brassica carinata HOM05D001925 ORTHO05D005701 2.1e-211 739.2 521 73.1
CARHR237820 Cardamine hirsuta HOM05D001925 ORTHO05D005701 4.8e-211 738.0 527 73.6
BcaB02g07622 Brassica carinata HOM05D001925 ORTHO05D005701 5.3e-210 734.6 533 71.5
BraA07t29988Z Brassica rapa HOM05D001925 ORTHO05D005701 9.0e-210 733.8 533 72.4
BcaC08g44822 Brassica carinata HOM05D001925 ORTHO05D005701 1.3e-208 729.9 533 71.3
A07p23240 Brassica napus HOM05D001925 ORTHO05D005701 6.4e-208 727.6 533 72.0
BolC6t37570H Brassica oleracea HOM05D001925 ORTHO05D005701 1.9e-207 726.1 533 71.1
C06p24120 Brassica napus HOM05D001925 ORTHO05D005701 4.2e-207 724.9 533 70.9
Thhalv10005869m.g Eutrema salsugineum HOM05D001925 ORTHO05D005701 1.2e-201 706.8 537 69.8
THA.LOC104825846 Tarenaya hassleriana HOM05D001925 ORTHO05D005701 5.1e-197 691.4 537 68.9
CiPaw.01G062800 Carya illinoinensis HOM05D001925 ORTHO05D005701 2.5e-175 619.4 543 59.7
QL04p053597 Quercus lobata HOM05D001925 ORTHO05D005701 1.4e-173 613.6 534 59.9
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 1.8e-173 613.2 538 58.2
CSS0009302 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D005701 2.3e-173 612.8 546 59.7
CSS0022743 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D005701 2.3e-173 612.8 546 59.7
Cfa003907 Carpinus fangiana HOM05D001925 ORTHO05D005701 6.3e-171 604.7 538 58.2
Actinidia10039 Actinidia chinensis HOM05D001925 ORTHO05D005701 1.1e-170 604.0 548 58.8
Manes.05G033300 Manihot esculenta HOM05D001925 ORTHO05D005701 1.2e-169 600.5 536 59.5
GSVIVG01008477001 Vitis vinifera HOM05D001925 ORTHO05D005701 1.3e-168 597.0 538 58.2
Rhsim07G0013900 Rhododendron simsii HOM05D001925 ORTHO05D005701 2.2e-168 596.3 542 57.2
Gohir.A11G089700 Gossypium hirsutum HOM05D001925 ORTHO05D005701 1.9e-167 593.2 536 58.4
Gorai.007G100400 Gossypium raimondii HOM05D001925 ORTHO05D005701 3.6e-166 589.0 536 58.2
vmacro13268 Vaccinium macrocarpon HOM05D001925 ORTHO05D005701 4.7e-166 588.6 545 56.9
Potri.014G085900 Populus trichocarpa HOM05D001925 ORTHO05D005701 1.0e-165 587.4 542 59.0
Sabra14G0062200 Salix brachista HOM05D001925 ORTHO05D005701 3.0e-165 585.9 540 58.7
Cpa.g.sc11.17 Carica papaya HOM05D001925 ORTHO05D005701 3.9e-165 585.5 536 56.3
Duzib138G1334 Durio zibethinus HOM05D001925 ORTHO05D005701 5.1e-165 585.1 533 57.2
Gohir.D11G094000 Gossypium hirsutum HOM05D001925 ORTHO05D005701 8.8e-165 584.3 536 58.0
Peaxi162Scf00020g00723 Petunia axillaris HOM05D001925 ORTHO05D005701 3.3e-164 582.4 530 56.6
MELO3C021204.2 Cucumis melo HOM05D001925 ORTHO05D005701 8.2e-163 577.8 535 56.3
Lj6A572T62 Lonicera japonica HOM05D001925 ORTHO05D005701 8.2e-163 577.8 551 56.3
Ciclev10019660m.g Citrus clementina HOM05D001925 ORTHO05D005701 1.1e-162 577.4 532 58.6
Atru.chr5.509 Acer truncatum HOM05D001925 ORTHO05D005701 4.1e-162 575.5 537 57.2
Lj6A578T43 Lonicera japonica HOM05D001925 ORTHO05D005701 4.1e-162 575.5 551 55.9
arahy.Tifrunner.gnm1.ann1.69YTHK Arachis hypogaea HOM05D001925 ORTHO05D005701 5.3e-162 575.1 542 56.8
Carub.0007s1073 Capsella rubella HOM05D001925 ORTHO05D005701 5.3e-162 575.1 410 73.9
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 7.0e-162 574.7 534 57.3
Nn6g33390 Nelumbo nucifera HOM05D001925 ORTHO05D005701 1.0e-160 570.9 543 55.6
Thecc.01G357800 Theobroma cacao HOM05D001925 ORTHO05D005701 2.9e-160 569.3 537 56.8
Migut.B01766 Erythranthe guttata HOM05D001925 ORTHO05D005701 3.8e-160 568.9 542 56.1
CANSAT56G3724 Cannabis sativa HOM05D001925 ORTHO05D005701 5.0e-160 568.5 538 57.1
RcHm_v2.0_Chr2g0161261 Rosa chinensis HOM05D001925 ORTHO05D005701 5.0e-160 568.5 518 56.9
arahy.Tifrunner.gnm1.ann1.NC5V2N Arachis hypogaea HOM05D001925 ORTHO05D005701 1.1e-159 567.4 539 57.5
TWI73G0882 Tripterygium wilfordii HOM05D001925 ORTHO05D005701 2.5e-159 566.2 525 55.8
Lj1g0000866 Lotus japonicus HOM05D001925 ORTHO05D005701 3.2e-159 565.8 539 55.7
arahy.Tifrunner.gnm1.ann1.9GVB5D Arachis hypogaea HOM05D001925 ORTHO05D005701 1.2e-158 563.9 539 56.6
RcHm_v2.0_Chr1g0355901 Rosa chinensis HOM05D001925 ORTHO05D005701 1.6e-158 563.5 519 57.2
MD01G1065000 Malus domestica HOM05D001925 ORTHO05D005701 2.1e-158 563.1 541 55.6
Medtr7g077840 Medicago truncatula HOM05D001925 ORTHO05D005701 2.7e-158 562.8 547 56.5
FvH4_7g14490 Fragaria vesca HOM05D001925 ORTHO05D005701 3.6e-158 562.4 520 56.7
ClCG06G003620 Citrullus lanatus HOM05D001925 ORTHO05D005701 4.7e-158 562.0 535 54.8
Glyma.18G234000 Glycine max HOM05D001925 ORTHO05D005701 8.0e-158 561.2 540 55.6
Cc02_g38160 Coffea canephora HOM05D001925 ORTHO05D005701 1.0e-157 560.8 534 56.0
Prupe.2G172000 Prunus persica HOM05D001925 ORTHO05D005701 1.0e-157 560.8 503 57.7
DCAR_007446 Daucus carota HOM05D001925 ORTHO05D005701 1.8e-157 560.1 543 56.0
VMungo1383G1901 Vigna mungo HOM05D001925 ORTHO05D005701 1.8e-157 560.1 546 55.7
Psat4g001160 Pisum sativum HOM05D001925 ORTHO05D005701 2.3e-157 559.7 544 55.1
Phvul.008G061800 Phaseolus vulgaris HOM05D001925 ORTHO05D005701 4.0e-157 558.9 548 55.7
TAR636G2317 Trochodendron aralioides HOM05D001925 ORTHO05D005701 4.0e-157 558.9 535 55.7
CAN.G78.90 Capsicum annuum HOM05D001925 ORTHO05D005701 5.2e-157 558.5 528 54.9
Ca_07928_v3 Cicer arietinum L. HOM05D001925 ORTHO05D005701 2.0e-156 556.6 545 54.7
Nitab4.5_0000583g0200 Nicotiana tabacum HOM05D001925 ORTHO05D005701 6.3e-155 551.6 545 54.5
Sed0000605 Sechium edule HOM05D001925 ORTHO05D005701 6.3e-155 551.6 535 54.2
SGA_v2.0_scaffold4G02302 Striga asiatica HOM05D001925 ORTHO05D005701 1.8e-154 550.1 522 57.7
MBI04_g28752_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D005701 9.1e-154 547.7 529 53.5
SalBow3G0216 Salvia bowleyana HOM05D001925 ORTHO05D005701 9.1e-154 547.7 527 55.6
PGR004G0833 Punica granatum HOM05D001925 ORTHO05D005701 1.6e-153 547.0 543 54.7
Oeu015817.1 Olea europaea HOM05D001925 ORTHO05D005701 1.0e-152 544.3 540 54.4
HanXRQChr04g0121151 Helianthus annuus HOM05D001925 ORTHO05D005701 2.9e-152 542.7 539 54.5
Sopen01g038540 Solanum pennellii HOM05D001925 ORTHO05D005701 2.5e-151 539.7 532 54.3
Eucgr.L01587 Eucalyptus grandis HOM05D001925 ORTHO05D005701 4.2e-151 538.9 541 53.4
ECA236G3836 Erigeron canadensis HOM05D001925 ORTHO05D005701 7.2e-151 538.1 532 54.3
PGSC0003DMG400000174 Solanum tuberosum HOM05D001925 ORTHO05D005701 7.2e-151 538.1 528 54.5
Lalb_Chr13g0304081 Lupinus albus HOM05D001925 ORTHO05D005701 6.1e-150 535.0 534 54.3
Solyc01g094760.3 Solanum lycopersicum HOM05D001925 ORTHO05D005701 1.4e-149 533.9 528 53.8
Lj7A511T78 Lonicera japonica HOM05D001925 ORTHO05D005701 1.5e-148 530.4 530 54.5
Dinv43827 Davidia involucrata HOM05D001925 ORTHO05D005701 9.8e-148 527.7 415 62.7
Nitab4.5_0006018g0050 Nicotiana tabacum HOM05D001925 ORTHO05D005701 7.0e-146 521.5 476 57.6
FAN10G1478 Fragaria x ananassa HOM05D001925 ORTHO05D005701 2.0e-145 520.0 520 54.2
FAN10G3665 Fragaria x ananassa HOM05D001925 ORTHO05D005701 2.7e-145 519.6 520 54.4
Lsat_1_v5_gn_7_4881 Lactuca sativa HOM05D001925 ORTHO05D005701 5.9e-145 518.5 530 54.9
FAN03G1293 Fragaria x ananassa HOM05D001925 ORTHO05D005701 1.0e-144 517.7 520 53.8
FAN06G1763 Fragaria x ananassa HOM05D001925 ORTHO05D005701 3.8e-144 515.8 520 53.8
BcaC07g40027 Brassica carinata HOM05D001925 ORTHO05D005701 5.0e-144 515.4 466 62.7
Eucgr.D01236 Eucalyptus grandis HOM05D001925 ORTHO05D005701 1.9e-143 513.5 536 51.7
FAN06G3551 Fragaria x ananassa HOM05D001925 ORTHO05D005701 1.9e-143 513.5 519 53.8
Hund16654 Selenicereus undatus HOM05D001925 ORTHO05D005701 4.2e-143 512.3 528 52.7
Aqoxy2G04021 Aquilegia oxysepala HOM05D001925 ORTHO05D005701 5.5e-143 511.9 547 50.5
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 6.1e-142 508.4 521 53.4
EL10Ac1g00402 Beta vulgaris HOM05D001925 ORTHO05D005701 6.8e-141 505.0 545 51.2
Carub.0002s1689 Capsella rubella HOM05D001925 ORTHO05D005701 1.2e-137 494.2 356 72.8
CDE08G0676 Ceratophyllum demersum HOM05D001925 ORTHO05D005701 1.2e-137 494.2 519 52.8
TPR.G37845 Trifolium pratense HOM05D001925 ORTHO05D005701 3.5e-137 492.7 546 51.5
Glyma.09G258700 Glycine max HOM05D001925 ORTHO05D005701 6.6e-136 488.4 536 51.3
Ah.05g180520 Amaranthus hybridus HOM05D001925 ORTHO05D001453 4.7e-134 482.3 530 50.8
PSO384G0118 Papaver somniferum HOM05D001925 ORTHO05D005701 8.0e-134 481.5 500 53.0
ATR0068G004 Amborella trichopoda HOM05D001925 ORTHO05D005701 4.0e-133 479.2 513 49.7
CsaV3_6G000620 Cucumis sativus L. HOM05D001925 ORTHO05D005701 4.0e-133 479.2 417 57.3
AUR62004371 Chenopodium quinoa HOM05D001925 ORTHO05D005701 2.9e-131 473.0 520 49.6
Sc01g0003490 Simmondsia chinensis HOM05D001925 ORTHO05D005701 7.0e-130 468.4 423 57.0
AUR62022580 Chenopodium quinoa HOM05D001925 ORTHO05D005701 3.5e-129 466.1 521 49.7
BolC8t50859H Brassica oleracea HOM05D001925 ORTHO05D005701 6.8e-109 398.7 471 50.3
C08p32440 Brassica napus HOM05D001925 ORTHO05D005701 8.9e-109 398.3 471 50.1
arahy.Tifrunner.gnm1.ann1.SID920 Arachis hypogaea HOM05D001925 ORTHO05D005701 1.0e-104 384.8 425 52.7
Os03g0759500 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D005701 5.6e-103 379.0 498 43.6
Zm00001eb214490 Zea mays HOM05D001925 ORTHO05D005701 3.1e-101 373.2 525 42.1
SEGI_03119 Sequoiadendron giganteum HOM05D001925 ORTHO05D005701 3.0e-96 356.7 569 37.1
PSO339G3045 Papaver somniferum HOM05D001925 ORTHO05D005701 2.5e-95 353.6 490 43.3
SMO147G0283 Selaginella moellendorffii HOM05D001925 ORTHO05D005701 1.1e-93 348.2 507 39.8
arahy.Tifrunner.gnm1.ann1.IR4EKV Arachis hypogaea HOM05D001925 ORTHO05D005701 4.6e-89 332.8 323 56.7
arahy.Tifrunner.gnm1.ann1.D25PMP Arachis hypogaea HOM05D001925 ORTHO05D005701 1.5e-87 327.8 423 46.8
Oeu050467.2 Olea europaea HOM05D001925 ORTHO05D005701 3.1e-85 320.1 537 39.5
AagrBONN_evm.TU.Sc2ySwM_368.2511 Anthoceros agrestis HOM05D001925 ORTHO05D005701 3.4e-84 316.6 490 39.6
Pp3c17_13600 Physcomitrium patens HOM05D001925 ORTHO05D005701 5.1e-80 302.8 525 36.6
Mapoly0177s0008 Marchantia polymorpha HOM05D001925 ORTHO05D005701 3.7e-78 296.6 476 37.6
Potri.001G135975 Populus trichocarpa HOM05D001925 ORTHO05D005701 1.8e-77 294.3 263 57.4
HPP92_019868 Vanilla planifolia HOM05D001925 ORTHO05D005701 2.6e-76 290.4 352 46.9
ECA236G4017 Erigeron canadensis HOM05D001925 ORTHO05D005701 1.0e-72 278.5 312 51.9
MD07G1135400 Malus domestica HOM05D001925 ORTHO05D005701 3.3e-63 246.9 348 43.7
arahy.Tifrunner.gnm1.ann1.IM3547 Arachis hypogaea HOM05D001925 ORTHO05D005701 1.3e-59 235.0 294 47.6
TPR.G26686 Trifolium pratense HOM05D001925 ORTHO05D005701 1.9e-58 231.1 268 48.9
arahy.Tifrunner.gnm1.ann1.FEJ64N Arachis hypogaea HOM05D001925 ORTHO05D005701 7.2e-58 229.2 210 58.1
Actinidia20895 Actinidia chinensis HOM05D001925 ORTHO05D005701 4.5e-52 209.9 167 59.3
BraA09t40455Z Brassica rapa HOM05D001925 ORTHO05D005701 4.1e-45 186.8 325 40.9
FvH4_2g10060 Fragaria vesca HOM05D001925 ORTHO05D005701 4.7e-33 146.7 205 44.4
A09p50030 Brassica napus HOM05D001925 ORTHO05D005701 3.0e-32 144.1 109 67.9
A09p50040 Brassica napus HOM05D001925 ORTHO05D005701 1.2e-31 142.1 97 79.4
Zm00001eb057980 Zea mays HOM05D001925 ORTHO05D005701 1.7e-27 128.3 401 29.4
MCO11G226 Micromonas commoda HOM05D001925 ORTHO05D005701 4.2e-26 123.6 569 22.8
Thhalv10027287m.g Eutrema salsugineum HOM05D001925 ORTHO05D005701 2.8e-25 120.9 96 64.6
CBR_g58810 Chara braunii HOM05D001925 ORTHO05D005701 2.2e-22 111.3 152 43.4
BcaC08g44824 Brassica carinata HOM05D001925 ORTHO05D005701 1.6e-20 105.1 115 53.9
C06p24140 Brassica napus HOM05D001925 ORTHO05D005701 2.0e-20 104.8 111 53.2
TPR.G16202 Trifolium pratense HOM05D001925 ORTHO05D005701 4.3e-18 97.1 126 46.8
PRCOL_00005952 Prasinoderma coloniale HOM05D001925 ORTHO05D005701 2.1e-17 94.7 495 24.0
MBI04_g47116_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D005701 3.4e-15 87.4 159 36.5
Dinv43826 Davidia involucrata HOM05D001925 ORTHO05D005701 7.8e-12 76.3 115 42.6
FAN24G1219 Fragaria x ananassa HOM05D001925 ORTHO05D005701 3.3e-10 70.9 105 40.0
Cre07.g355200 Chlamydomonas reinhardtii HOM05D001925 ORTHO05D005701 8.9e-08 62.8 449 21.8
C09p49930 Brassica napus HOM05D001925 ORTHO05D039571 7.5e-07 59.7 120 39.2
arahy.Tifrunner.gnm1.ann1.ZHBQ27 Arachis hypogaea HOM05D002506 ORTHO05D002879 9.8e-07 59.3 78 50.0
FvH4_2g10061 Fragaria vesca HOM05D001925 ORTHO05D005701 3.7e-06 57.4 97 37.1
FAN15G3430 Fragaria x ananassa HOM05D001925 ORTHO05D005701 3.7e-06 57.4 102 34.3


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