Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G20150 Aethionema arabicum HOM05D008013 ORTHO05D010149 5.3e-44 180.6 92 100.0
Sp7g28270 Schrenkiella parvula HOM05D008013 ORTHO05D010149 1.7e-34 149.1 90 77.8
Carub.0007s1021 Capsella rubella HOM05D008013 ORTHO05D010149 2.9e-34 148.3 90 77.8
AL7G21760 Arabidopsis lyrata HOM05D008013 ORTHO05D010149 7.2e-33 143.7 90 76.7
Thhalv10026665m.g Eutrema salsugineum HOM05D008013 ORTHO05D010149 1.2e-32 142.9 90 78.9
AT4G30390 Arabidopsis thaliana HOM05D008013 ORTHO05D010149 4.7e-32 141.0 90 73.3
A08p19260 Brassica napus HOM05D008013 ORTHO05D010149 1.0e-31 139.8 88 73.9
BraA08t33887Z Brassica rapa HOM05D008013 ORTHO05D010149 1.2e-30 136.3 88 72.7
A03p59800 Brassica napus HOM05D008013 ORTHO05D010149 1.8e-28 129.0 91 67.0
C07p57840 Brassica napus HOM05D008013 ORTHO05D010149 9.1e-28 126.7 91 65.9
BolC7t46244H Brassica oleracea HOM05D008013 ORTHO05D010149 9.1e-28 126.7 91 65.9
BcaNung00543 Brassica carinata HOM05D008013 ORTHO05D010149 1.2e-27 126.3 92 65.2
BraA03t15033Z Brassica rapa HOM05D008013 ORTHO05D010149 5.9e-27 124.0 91 64.8
THA.LOC104803516 Tarenaya hassleriana HOM05D008013 ORTHO05D010149 1.7e-26 122.5 88 71.6
MD04G1240900 Malus domestica HOM05D008013 ORTHO05D010149 1.1e-25 119.8 84 69.0
Actinidia34775 Actinidia chinensis HOM05D008013 ORTHO05D010149 2.5e-25 118.6 84 66.7
MD12G1257800 Malus domestica HOM05D008013 ORTHO05D010149 3.2e-25 118.2 84 69.0
Sed0019978 Sechium edule HOM05D008013 ORTHO05D010149 3.2e-25 118.2 84 67.9
Phvul.008G056200 Phaseolus vulgaris HOM05D008013 ORTHO05D010149 9.4e-25 116.7 85 63.5
Haze_04520 Corylus avellana HOM05D008013 ORTHO05D010149 1.2e-24 116.3 84 66.7
RcHm_v2.0_Chr3g0448311 Rosa chinensis HOM05D008013 ORTHO05D010149 1.2e-24 116.3 84 67.9
Lj1g0002079 Lotus japonicus HOM05D008013 ORTHO05D010149 1.6e-24 115.9 84 66.7
CiPaw.08G117300 Carya illinoinensis HOM05D008013 ORTHO05D010149 2.1e-24 115.5 84 66.7
CsaV3_5G032690 Cucumis sativus L. HOM05D008013 ORTHO05D010149 2.1e-24 115.5 84 69.0
Gohir.D08G244400 Gossypium hirsutum HOM05D008013 ORTHO05D010149 2.1e-24 115.5 83 65.1
CAN.G4.29 Capsicum annuum HOM05D008013 ORTHO05D010149 2.7e-24 115.2 88 62.5
Cc09_g03310 Coffea canephora HOM05D008013 ORTHO05D010149 2.7e-24 115.2 84 63.1
Gohir.A08G224100 Gossypium hirsutum HOM05D008013 ORTHO05D010149 2.7e-24 115.2 83 65.1
GSVIVG01019150001 Vitis vinifera HOM05D008013 ORTHO05D010149 2.7e-24 115.2 84 69.0
Thecc.05G204600 Theobroma cacao HOM05D008013 ORTHO05D010149 3.6e-24 114.8 84 65.5
TPR.G29412 Trifolium pratense HOM05D008013 ORTHO05D010149 3.6e-24 114.8 84 64.3
Manes.09G183801 Manihot esculenta HOM05D008013 ORTHO05D010149 8.0e-24 113.6 84 64.3
Nn1g08299 Nelumbo nucifera HOM05D008013 ORTHO05D010149 2.3e-23 112.1 85 60.0
TWI59G0485 Tripterygium wilfordii HOM05D008013 ORTHO05D010149 2.3e-23 112.1 84 65.5
Glyma.09G252532 Glycine max HOM05D008013 ORTHO05D010149 3.0e-23 111.7 82 67.1
BcaB03g12645 Brassica carinata HOM05D008013 ORTHO05D010149 5.2e-23 110.9 89 66.3
Lalb_Chr19g0126801 Lupinus albus HOM05D008013 ORTHO05D010149 5.2e-23 110.9 84 61.9
Solyc04g150139.1 Solanum lycopersicum HOM05D008013 ORTHO05D010149 6.8e-23 110.5 88 60.2
Glyma.18G240151 Glycine max HOM05D008013 ORTHO05D010149 1.2e-22 109.8 82 64.6
Potri.019G051850 Populus trichocarpa HOM05D008013 ORTHO05D010149 1.2e-22 109.8 82 64.6
Rhsim09G0131000 Rhododendron simsii HOM05D008013 ORTHO05D010149 1.2e-22 109.8 85 63.5
HanXRQChr11g0333671 Helianthus annuus HOM05D008013 ORTHO05D010149 4.4e-22 107.8 83 60.2
CSS0003713 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 7.5e-22 107.1 84 59.5
CSS0043393 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 7.5e-22 107.1 84 59.5
CANSAT54G1767 Cannabis sativa HOM05D000837 ORTHO05D008386 9.8e-22 106.7 82 68.3
Oeu001239.1 Olea europaea HOM05D008013 ORTHO05D010149 9.8e-22 106.7 88 62.5
Gorai.004G260700 Gossypium raimondii HOM05D008013 ORTHO05D010149 1.3e-21 106.3 80 63.8
Ciclev10013456m.g Citrus clementina HOM05D008013 ORTHO05D010149 1.7e-21 105.9 85 62.4
Dinv02912 Davidia involucrata HOM05D008013 ORTHO05D010149 1.7e-21 105.9 88 58.0
Atru.chr12.2150 Acer truncatum HOM05D008013 ORTHO05D010149 2.2e-21 105.5 78 66.7
FAN05G0262 Fragaria x ananassa HOM05D008013 ORTHO05D010149 3.7e-21 104.8 97 55.7
Hund07321 Selenicereus undatus HOM05D008013 ORTHO05D010149 8.3e-21 103.6 82 62.2
EL10Ac4g09411 Beta vulgaris HOM05D008013 ORTHO05D010149 2.4e-20 102.1 78 64.1
Migut.F02069 Erythranthe guttata HOM05D008013 ORTHO05D010149 4.1e-20 101.3 88 58.0
Gohir.D13G159800 Gossypium hirsutum HOM05D008013 ORTHO05D010149 3.5e-19 98.2 78 61.5
Pp3c1_15100 Physcomitrium patens HOM05D008013 ORTHO05D010149 3.5e-19 98.2 85 50.6
PGR119G0441 Punica granatum HOM05D000837 ORTHO05D008386 3.5e-19 98.2 82 62.2
Ah.06g195780 Amaranthus hybridus HOM05D008013 ORTHO05D010149 4.5e-19 97.8 84 59.5
Gohir.A13G155000 Gossypium hirsutum HOM05D008013 ORTHO05D010149 1.0e-18 96.7 78 61.5
Hund21874 Selenicereus undatus HOM05D008013 ORTHO05D010149 1.3e-18 96.3 75 64.0
PSO357G0534 Papaver somniferum HOM05D008013 ORTHO05D010149 3.8e-18 94.7 84 54.8
PSO170G5632 Papaver somniferum HOM05D000837 ORTHO05D008386 5.0e-18 94.4 84 54.8
unitig_736.g22502 Utricularia gibba HOM05D008013 ORTHO05D010149 6.5e-18 94.0 82 57.3
HanXRQChr05g0156911 Helianthus annuus HOM05D000837 ORTHO05D008386 1.1e-17 93.2 83 56.6
ClCG10G008070 Citrullus lanatus HOM05D000837 ORTHO05D008386 1.5e-17 92.8 114 49.1
arahy.Tifrunner.gnm1.ann1.L7M8PN Arachis hypogaea HOM05D008013 ORTHO05D010149 2.5e-17 92.0 74 59.5
SHI02464 Sapria himalayana HOM05D008013 ORTHO05D010149 3.2e-17 91.7 80 57.5
CARHR238290 Cardamine hirsuta HOM05D008013 ORTHO05D010149 6.1e-16 87.4 51 74.5
vmacro10397 Vaccinium macrocarpon HOM05D000837 ORTHO05D008386 1.4e-15 86.3 100 50.0
Sabra19G0056800 Salix brachista HOM05D008013 ORTHO05D010149 2.3e-15 85.5 132 40.2
AagrBONN_evm.TU.Sc2ySwM_228.1824 Anthoceros agrestis HOM05D008013 ORTHO05D010149 2.2e-13 79.0 79 50.6
BcaC01g01153 Brassica carinata HOM05D008013 ORTHO05D010149 2.4e-12 75.5 69 55.1
Mapoly0013s0068 Marchantia polymorpha HOM05D008013 ORTHO05D010149 5.9e-11 70.9 85 42.4
PGSC0003DMG402023117 Solanum tuberosum HOM05D008013 ORTHO05D010149 1.0e-10 70.1 84 44.0
MBI07_g00621_MAGBIO Magnolia biondii HOM05D000837 ORTHO05D008386 1.9e-09 65.9 54 59.3
Sed0019520 Sechium edule HOM05D008013 ORTHO05D010149 3.6e-08 61.6 47 59.6
ATR0609G113 Amborella trichopoda HOM05D008013 ORTHO05D010149 6.1e-08 60.8 50 52.0
FAN09G3946 Fragaria x ananassa HOM05D000837 ORTHO05D008386 1.8e-07 59.3 47 59.6
Cre12.g484300 Chlamydomonas reinhardtii HOM05D008013 ORTHO05D010149 3.0e-07 58.5 80 38.8
Sc16g0010260 Simmondsia chinensis HOM05D008013 ORTHO05D010149 6.8e-07 57.4 44 61.4
TAR109G0001 Trochodendron aralioides HOM05D008013 ORTHO05D010149 8.9e-07 57.0 42 59.5


User provided reference genes

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