Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 0.0e+00 1373.6 705 100.0
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 0.0e+00 1199.5 710 87.2
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 0.0e+00 1188.3 711 86.5
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 0.0e+00 1183.7 713 86.3
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 0.0e+00 1182.2 712 85.7
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 0.0e+00 1172.9 710 85.2
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 0.0e+00 1171.8 703 86.2
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 0.0e+00 1165.2 709 84.8
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 0.0e+00 1164.8 709 84.8
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 0.0e+00 1163.3 709 84.8
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 0.0e+00 1158.3 715 84.5
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 0.0e+00 1151.0 709 84.1
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 0.0e+00 1080.5 710 77.7
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 1.5e-279 966.1 687 71.6
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 2.2e-278 962.2 708 69.9
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 2.2e-278 962.2 688 71.7
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 1.8e-277 959.1 682 71.7
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 1.7e-275 952.6 695 71.2
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 8.5e-275 950.3 690 70.3
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 6.1e-273 944.1 697 69.2
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 1.5e-271 939.5 700 69.9
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 2.0e-271 939.1 677 69.6
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 7.4e-271 937.2 690 69.9
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 4.8e-270 934.5 705 68.1
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 4.8e-270 934.5 712 69.8
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 8.2e-270 933.7 705 68.2
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 1.6e-268 929.5 717 67.5
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 6.5e-267 924.1 686 68.2
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 3.2e-266 921.8 681 68.7
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 5.5e-266 921.0 678 68.7
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 9.4e-266 920.2 706 68.0
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 1.2e-265 919.8 705 68.1
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 2.7e-265 918.7 705 69.1
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 3.6e-265 918.3 684 69.0
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 3.6e-265 918.3 667 70.3
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 3.6e-265 918.3 667 70.3
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 3.6e-265 918.3 755 64.0
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 4.7e-265 917.9 715 66.0
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 6.1e-265 917.5 720 67.1
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 1.0e-264 916.8 686 68.4
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 1.0e-264 916.8 671 69.0
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 1.4e-264 916.4 695 68.3
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 1.5e-263 912.9 711 66.8
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 2.0e-263 912.5 686 68.7
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 2.8e-262 908.7 702 66.1
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 1.1e-261 906.7 690 67.7
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 1.8e-261 906.0 693 67.5
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 1.8e-261 906.0 678 68.0
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 4.1e-261 904.8 678 68.0
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.2e-260 903.3 664 68.8
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 1.7e-259 899.4 723 65.3
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 1.7e-259 899.4 716 66.3
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 3.8e-259 898.3 685 67.3
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 1.9e-258 896.0 675 68.6
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 1.9e-258 896.0 701 65.3
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 5.5e-258 894.4 700 66.7
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 2.7e-257 892.1 676 67.9
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 2.7e-257 892.1 681 67.0
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 6.1e-257 891.0 714 65.8
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 1.0e-256 890.2 709 66.4
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 4.0e-256 888.3 701 65.3
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 1.7e-254 882.9 674 67.8
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 2.2e-254 882.5 698 65.8
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 2.8e-254 882.1 706 64.4
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 1.8e-253 879.4 686 67.1
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 6.5e-251 870.9 695 66.3
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 1.9e-250 869.4 706 64.9
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 2.1e-249 865.9 694 65.1
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.5e-247 859.8 690 65.1
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 7.5e-247 857.4 685 64.2
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 5.4e-245 851.3 689 65.5
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 4.5e-244 848.2 659 66.2
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 2.3e-243 845.9 675 65.8
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 1.5e-242 843.2 745 61.1
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 2.8e-241 839.0 604 70.4
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 2.3e-240 835.9 711 63.9
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 7.5e-239 830.9 669 63.1
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 1.4e-237 826.6 760 59.5
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 3.5e-236 822.0 720 62.4
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 4.6e-236 821.6 609 68.3
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 5.2e-232 808.1 643 64.1
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 5.8e-231 804.7 668 64.8
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 7.5e-231 804.3 598 67.6
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 9.5e-226 787.3 597 67.7
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 1.3e-222 776.9 614 66.9
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 1.8e-216 756.5 697 59.3
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 1.1e-213 747.3 613 61.8
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 2.7e-212 742.7 575 66.8
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 4.6e-212 741.9 637 61.4
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 7.3e-210 734.6 557 66.8
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 9.6e-186 654.4 669 53.4
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 1.8e-184 650.2 1278 35.5
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 4.5e-175 619.0 616 55.2
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 2.9e-174 616.3 658 51.5
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 2.5e-173 613.2 674 49.7
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 2.9e-166 589.7 400 73.8
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 1.4e-157 560.8 442 66.5
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 8.8e-147 525.0 401 64.8
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 5.4e-136 489.2 722 42.4
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 3.5e-135 486.5 418 63.2
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 2.3e-131 473.8 612 45.3
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 1.7e-126 457.6 483 50.9
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 4.6e-119 433.0 289 81.3
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 8.6e-118 428.7 333 64.3
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 1.2e-108 398.3 273 71.8
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 1.0e-94 352.1 225 77.3
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 8.1e-92 342.4 465 47.5
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 8.1e-92 342.4 311 60.1
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 2.7e-87 327.4 285 60.7
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 8.1e-84 315.8 203 77.3
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 4.5e-82 310.1 295 58.0
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 8.7e-78 295.8 203 72.9
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 1.0e-70 272.3 623 32.9
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.0e-57 229.2 155 72.9
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 7.9e-47 193.0 148 64.9
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 5.0e-41 173.7 203 51.7
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 6.5e-41 173.3 147 61.9
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 3.6e-31 141.0 103 65.0
SalBow1G2918 Salvia bowleyana HOM05D006346 ORTHO05D007910 7.7e-26 123.2 106 61.3
Glyma.04G155200 Glycine max HOM05D006346 ORTHO05D007910 3.8e-25 120.9 102 62.7
MD15G1149600 Malus domestica HOM05D006346 ORTHO05D007910 1.4e-22 112.5 204 39.2
SEGI_23921 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 9.1e-19 99.8 103 49.5
HanXRQChr01g0001911 Helianthus annuus HOM05D006346 ORTHO05D007910 4.7e-15 87.4 53 75.5
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 5.2e-14 84.0 122 44.3
A05p44400 Brassica napus HOM05D034890 ORTHO05D100541 7.5e-13 80.1 69 60.9
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 9.8e-13 79.7 68 58.8


User provided reference genes

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