Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G19470 Aethionema arabicum HOM05D005968 ORTHO05D007158 2.7e-64 248.4 118 100.0
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 1.1e-57 226.5 117 89.7
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 2.4e-57 225.3 117 89.7
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 2.0e-56 222.2 117 87.2
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 2.7e-56 221.9 116 87.9
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 4.6e-56 221.1 117 87.2
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 5.9e-56 220.7 117 86.3
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 1.0e-55 219.9 117 86.3
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 1.3e-55 219.5 117 85.5
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 1.3e-55 219.5 117 85.5
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 1.3e-55 219.5 117 85.5
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 3.0e-55 218.4 117 85.5
Lalb_Chr12g0198701 Lupinus albus HOM05D005968 ORTHO05D007158 5.0e-55 217.6 117 83.8
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 1.1e-54 216.5 117 84.6
TPR.G24874 Trifolium pratense HOM05D005968 ORTHO05D007158 1.9e-54 215.7 117 81.2
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 2.5e-54 215.3 117 85.5
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 3.3e-54 214.9 117 81.2
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 3.3e-54 214.9 117 82.9
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 3.3e-54 214.9 117 82.9
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 3.3e-54 214.9 117 81.2
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 4.3e-54 214.5 117 81.2
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 4.3e-54 214.5 117 82.1
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 1.2e-53 213.0 117 81.2
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 1.2e-53 213.0 117 81.2
Medtr4g130840 Medicago truncatula HOM05D005968 ORTHO05D007158 1.6e-53 212.6 117 80.3
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 1.6e-53 212.6 117 80.3
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 2.1e-53 212.2 117 81.2
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 2.1e-53 212.2 117 82.1
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 3.6e-53 211.5 117 82.1
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 4.7e-53 211.1 117 82.9
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 6.2e-53 210.7 117 81.2
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 1.0e-52 209.9 117 80.3
ClCG06G012410 Citrullus lanatus HOM05D005968 ORTHO05D007158 1.4e-52 209.5 117 80.3
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 1.4e-52 209.5 117 80.3
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 1.4e-52 209.5 117 81.2
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 2.3e-52 208.8 117 81.2
MELO3C010224.2 Cucumis melo HOM05D005968 ORTHO05D007158 2.3e-52 208.8 117 80.3
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 2.3e-52 208.8 117 79.5
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 3.1e-52 208.4 117 80.3
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 3.1e-52 208.4 116 78.4
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 4.0e-52 208.0 117 80.3
GSVIVG01023605001 Vitis vinifera HOM05D005968 ORTHO05D007158 4.0e-52 208.0 117 79.5
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 5.2e-52 207.6 117 79.5
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 5.2e-52 207.6 117 81.2
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 5.2e-52 207.6 117 79.5
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 6.8e-52 207.2 117 81.2
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 1.2e-51 206.5 117 78.6
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 2.0e-51 205.7 117 78.6
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 4.4e-51 204.5 117 79.5
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 5.8e-51 204.1 117 80.3
Dinv43246 Davidia involucrata HOM05D005968 ORTHO05D007158 5.8e-51 204.1 117 80.3
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 7.5e-51 203.8 117 77.8
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 1.7e-50 202.6 117 79.5
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 2.9e-50 201.8 116 78.4
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 3.7e-50 201.4 117 78.6
Sopen07g001730 Solanum pennellii HOM05D005968 ORTHO05D007158 3.7e-50 201.4 117 78.6
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 3.7e-50 201.4 117 78.6
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 6.4e-50 200.7 117 77.8
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 8.3e-50 200.3 111 79.3
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 8.3e-50 200.3 117 77.8
Solyc07g005620.2 Solanum lycopersicum HOM05D005968 ORTHO05D007158 8.3e-50 200.3 117 77.8
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 1.4e-49 199.5 116 77.6
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 1.9e-49 199.1 117 77.8
RcHm_v2.0_Chr2g0085621 Rosa chinensis HOM05D005968 ORTHO05D007158 2.4e-49 198.7 117 75.2
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 3.2e-49 198.4 117 77.8
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 3.2e-49 198.4 117 77.8
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 3.2e-49 198.4 110 80.0
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 5.4e-49 197.6 117 76.9
Cc06_g14960 Coffea canephora HOM05D005968 ORTHO05D007158 9.2e-49 196.8 117 76.9
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 1.2e-48 196.4 117 76.9
Oeu038141.1 Olea europaea HOM05D005968 ORTHO05D007158 4.6e-48 194.5 117 76.1
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 6.0e-48 194.1 117 75.2
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 7.8e-48 193.7 117 75.2
HPP92_004698 Vanilla planifolia HOM05D005968 ORTHO05D007158 1.0e-47 193.4 118 76.3
Os05g0279600 Oryza sativa ssp. japonica HOM05D005968 ORTHO05D007158 3.9e-47 191.4 117 72.6
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 8.6e-47 190.3 117 72.6
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 1.1e-46 189.9 117 72.6
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 5.6e-46 187.6 117 71.8
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 5.6e-46 187.6 117 73.5
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 2.8e-45 185.3 117 74.4
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 5.2e-44 181.0 121 70.2
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 6.8e-44 180.6 161 56.5
Cpa.g.sc46.156 Carica papaya HOM05D005968 ORTHO05D007158 1.5e-43 179.5 137 65.0
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 9.8e-43 176.8 101 77.2
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.4e-41 172.9 110 72.7
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 1.2e-40 169.9 191 47.6
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 1.0e-39 166.8 119 64.7
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 1.5e-38 162.9 116 58.6
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 3.6e-37 158.3 90 76.7
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 1.8e-36 156.0 87 77.0
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 5.2e-36 154.5 90 75.6
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 9.2e-33 143.7 89 71.9
CDE04G1812 Ceratophyllum demersum HOM05D005968 ORTHO05D007158 9.2e-33 143.7 89 69.7
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 5.1e-31 137.9 113 58.4
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 6.6e-31 137.5 99 55.6
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 1.1e-28 130.2 81 76.5
TAR636G0142 Trochodendron aralioides HOM05D002374 ORTHO05D003594 4.4e-27 124.8 77 72.7
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 3.2e-25 118.6 69 76.8
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 8.7e-23 110.5 67 73.1
Lsat_1_v5_gn_4_18741 Lactuca sativa HOM05D005968 ORTHO05D007158 1.9e-22 109.4 73 69.9
Eucgr.C02541 Eucalyptus grandis HOM05D005968 ORTHO05D007158 2.8e-21 105.5 71 71.8
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 9.3e-17 90.5 49 77.6
arahy.Tifrunner.gnm1.ann1.QXT71M Arachis hypogaea HOM05D005968 ORTHO05D007158 3.5e-16 88.6 46 84.8
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 7.9e-16 87.4 52 73.1
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 1.8e-15 86.3 81 54.3
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 3.9e-15 85.1 48 72.9
arahy.Tifrunner.gnm1.ann1.VCSM30 Arachis hypogaea HOM05D005968 ORTHO05D007158 1.1e-14 83.6 47 74.5
arahy.Tifrunner.gnm1.ann1.HGKJ8P Arachis hypogaea HOM05D005968 ORTHO05D007158 6.9e-12 74.3 40 77.5
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 2.2e-10 69.3 67 55.2
Oeu038782.2 Olea europaea HOM05D005968 ORTHO05D007158 2.3e-07 59.3 56 50.0
Haze_19213 Corylus avellana HOM05D000344 ORTHO05D005296 6.7e-07 57.8 29 86.2


User provided reference genes

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