Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G19330 Aethionema arabicum HOM05D003067 ORTHO05D009378 5.1e-57 224.2 112 100.0
A01p07190 Brassica napus HOM05D003067 ORTHO05D009378 1.1e-19 100.1 112 49.1
C01p07950 Brassica napus HOM05D003067 ORTHO05D009378 1.5e-19 99.8 112 49.1
BolC1t00782H Brassica oleracea HOM05D003067 ORTHO05D009378 1.5e-19 99.8 112 49.1
Sp7g28870 Schrenkiella parvula HOM05D003067 ORTHO05D009378 1.5e-19 99.8 113 47.8
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 3.2e-19 98.6 112 48.2
AT4G30993 Arabidopsis thaliana HOM05D003067 ORTHO05D009378 4.2e-19 98.2 112 48.2
BcaC09g51887 Brassica carinata HOM05D003067 ORTHO05D009378 4.2e-19 98.2 112 49.1
Thhalv10025917m.g Eutrema salsugineum HOM05D003067 ORTHO05D009378 7.2e-19 97.4 112 47.3
AL7G21080 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 1.2e-18 96.7 112 48.2
BraA01t00670Z Brassica rapa HOM05D003067 ORTHO05D009378 8.0e-18 94.0 112 47.3
CARHR238890 Cardamine hirsuta HOM05D003067 ORTHO05D009378 1.4e-17 93.2 111 48.6
BcaNung03423 Brassica carinata HOM05D003067 ORTHO05D009378 2.3e-17 92.4 112 48.2
THA.LOC104803568 Tarenaya hassleriana HOM05D003067 ORTHO05D009378 1.7e-15 86.3 114 42.1
C04p20200 Brassica napus HOM05D003067 ORTHO05D009378 8.5e-12 73.9 115 44.3
BolC4t23558H Brassica oleracea HOM05D003067 ORTHO05D009378 3.2e-11 72.0 143 39.9
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 4.2e-11 71.6 116 39.7
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 1.6e-10 69.7 116 37.9
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 2.3e-09 65.9 116 37.1
ATR1153G020 Amborella trichopoda HOM05D003067 ORTHO05D009378 2.3e-09 65.9 113 36.3
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 2.3e-09 65.9 119 36.1
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 4.0e-09 65.1 117 34.2
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 6.8e-09 64.3 116 37.1
FAN19G0469 Fragaria x ananassa HOM05D003067 ORTHO05D009378 8.8e-09 63.9 120 35.8
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 1.2e-08 63.5 119 35.3
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 1.2e-08 63.5 119 35.3
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 1.5e-08 63.2 133 33.8
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 3.4e-08 62.0 117 36.8
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 4.4e-08 61.6 114 32.5
Duzib150G0133 Durio zibethinus HOM05D003067 ORTHO05D009378 4.4e-08 61.6 116 37.1
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 5.7e-08 61.2 115 33.9
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 5.7e-08 61.2 114 31.6
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 7.5e-08 60.8 114 32.5
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 7.5e-08 60.8 113 34.5
Cpa.g.sc46.125 Carica papaya HOM05D003067 ORTHO05D009378 9.8e-08 60.5 146 30.8
Oeu043496.1 Olea europaea HOM05D003067 ORTHO05D009378 9.8e-08 60.5 118 33.1
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 1.7e-07 59.7 116 35.3
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 2.8e-07 58.9 116 31.9
Cc06_g15260 Coffea canephora HOM05D003067 ORTHO05D009378 2.8e-07 58.9 114 37.7
Oeu043497.1 Olea europaea HOM05D003067 ORTHO05D009378 3.7e-07 58.5 118 32.2
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 3.7e-07 58.5 119 32.8
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 6.3e-07 57.8 116 33.6
TWI34G0508 Tripterygium wilfordii HOM05D003067 ORTHO05D009378 6.3e-07 57.8 117 35.0
HanXRQChr05g0133261 Helianthus annuus HOM05D003067 ORTHO05D009378 1.4e-06 56.6 114 28.9
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 1.4e-06 56.6 121 34.7
AL2G22600 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 1.8e-06 56.2 63 46.0
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 1.8e-06 56.2 113 37.2
Potri.018G110300 Populus trichocarpa HOM05D003067 ORTHO05D009378 1.8e-06 56.2 117 33.3
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 1.8e-06 56.2 116 37.1
Sabra18G0093300 Salix brachista HOM05D003067 ORTHO05D009378 2.4e-06 55.8 80 40.0
CANSAT11G2322 Cannabis sativa HOM05D003067 ORTHO05D009378 5.4e-06 54.7 118 30.5
Nitab4.5_0001478g0120 Nicotiana tabacum HOM05D003067 ORTHO05D009378 5.4e-06 54.7 114 33.3
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 7.0e-06 54.3 116 32.8
AL6G46700 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 9.1e-06 53.9 63 44.4


User provided reference genes

Program Settings