Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G19280 Aethionema arabicum HOM05D005782 ORTHO05D007436 3.3e-248 861.3 443 100.0
Sp7g28920 Schrenkiella parvula HOM05D005782 ORTHO05D007436 3.8e-172 608.6 421 77.0
CARHR238950 Cardamine hirsuta HOM05D005782 ORTHO05D007436 2.0e-168 596.3 422 76.8
Carub.0007s0948 Capsella rubella HOM05D005782 ORTHO05D007436 1.2e-162 577.0 424 74.3
Thhalv10025215m.g Eutrema salsugineum HOM05D005782 ORTHO05D007436 2.1e-162 576.2 425 73.6
BcaC09g51891 Brassica carinata HOM05D005782 ORTHO05D007436 2.0e-160 569.7 421 74.1
C01p07890 Brassica napus HOM05D005782 ORTHO05D007436 3.3e-160 568.9 421 74.1
BolC1t00776H Brassica oleracea HOM05D005782 ORTHO05D007436 3.3e-160 568.9 421 74.1
AL7G21030 Arabidopsis lyrata HOM05D005782 ORTHO05D007436 2.8e-159 565.8 423 73.8
AT4G31040 Arabidopsis thaliana HOM05D005782 ORTHO05D007436 4.8e-159 565.1 425 72.7
THA.LOC104803572 Tarenaya hassleriana HOM05D005782 ORTHO05D007436 4.8e-159 565.1 415 70.8
BcaNung03419 Brassica carinata HOM05D005782 ORTHO05D007436 6.3e-159 564.7 426 72.8
A01p07130 Brassica napus HOM05D005782 ORTHO05D007436 5.3e-158 561.6 423 72.1
BraA01t00665Z Brassica rapa HOM05D005782 ORTHO05D007436 2.6e-157 559.3 422 72.3
CsaV3_2G009240 Cucumis sativus L. HOM05D005782 ORTHO05D007436 1.8e-137 493.4 419 63.5
TWI32G0667 Tripterygium wilfordii HOM05D005782 ORTHO05D007436 6.8e-137 491.5 415 63.6
Sabra06G0060600 Salix brachista HOM05D005782 ORTHO05D007436 1.2e-136 490.7 422 63.5
Potri.006G080100 Populus trichocarpa HOM05D005782 ORTHO05D007436 1.5e-136 490.3 420 64.0
Potri.018G150000 Populus trichocarpa HOM05D005782 ORTHO05D007436 1.3e-135 487.3 433 63.3
CSS0047952 Camellia sinensis var. sinensis HOM05D005782 ORTHO05D007436 2.8e-135 486.1 415 64.6
Oeu021242.1 Olea europaea HOM05D005782 ORTHO05D007436 4.9e-135 485.3 429 61.5
MSTRG.19410 Avicennia marina HOM05D005782 ORTHO05D007436 1.6e-133 480.3 401 63.8
Nn8g41244 Nelumbo nucifera HOM05D005782 ORTHO05D007436 3.5e-133 479.2 421 61.0
Haze_21249 Corylus avellana HOM05D005782 ORTHO05D007436 2.3e-132 476.5 477 57.0
BcaNung02727 Brassica carinata HOM05D005782 ORTHO05D007436 1.5e-131 473.8 421 64.8
Sed0017765 Sechium edule HOM05D005782 ORTHO05D007436 3.3e-131 472.6 423 61.5
SGA_v2.0_scaffold318G48485 Striga asiatica HOM05D005782 ORTHO05D007436 3.3e-131 472.6 419 62.3
GSVIVG01032240001 Vitis vinifera HOM05D005782 ORTHO05D007436 1.2e-130 470.7 355 67.6
Actinidia07556 Actinidia chinensis HOM05D005782 ORTHO05D007436 2.1e-130 469.9 383 64.5
MSTRG.5969 Avicennia marina HOM05D005782 ORTHO05D007436 1.8e-129 466.8 420 60.7
Eucgr.C02158 Eucalyptus grandis HOM05D005782 ORTHO05D007436 4.4e-128 462.2 381 63.5
Nitab4.5_0000170g0200 Nicotiana tabacum HOM05D005782 ORTHO05D007436 1.3e-127 460.7 419 61.6
EL10Ac3g05861 Beta vulgaris HOM05D005782 ORTHO05D007436 1.7e-127 460.3 390 62.8
TAR383G0506 Trochodendron aralioides HOM05D005782 ORTHO05D007436 1.7e-127 460.3 416 61.3
VMungo0464G0621 Vigna mungo HOM05D005782 ORTHO05D007436 1.7e-127 460.3 402 61.2
Prupe.1G002100 Prunus persica HOM05D005782 ORTHO05D007436 6.4e-127 458.4 412 60.2
Cc06_g23670 Coffea canephora HOM05D005782 ORTHO05D007436 1.9e-126 456.8 377 63.7
Glyma.08G359700 Glycine max HOM05D005782 ORTHO05D007436 2.4e-126 456.4 423 58.9
AUR62015437 Chenopodium quinoa HOM05D005782 ORTHO05D007436 3.2e-126 456.1 431 58.2
Atru.chr7.1036 Acer truncatum HOM05D005782 ORTHO05D007436 4.1e-126 455.7 423 60.5
Gohir.D05G000500 Gossypium hirsutum HOM05D005782 ORTHO05D007436 5.4e-126 455.3 424 58.7
MBI16_g00821_MAGBIO Magnolia biondii HOM05D005782 ORTHO05D007436 7.0e-126 454.9 422 59.5
Gorai.009G000300 Gossypium raimondii HOM05D005782 ORTHO05D007436 9.2e-126 454.5 424 58.5
HanXRQChr03g0067061 Helianthus annuus HOM05D005782 ORTHO05D007436 1.6e-125 453.8 427 58.8
Manes.05G205900 Manihot esculenta HOM05D005782 ORTHO05D007436 1.6e-125 453.8 420 61.7
Gohir.A05G000300 Gossypium hirsutum HOM05D005782 ORTHO05D007436 1.0e-124 451.1 422 58.5
Ah.13g066690 Amaranthus hybridus HOM05D005782 ORTHO05D007436 6.6e-124 448.4 400 61.2
Lalb_Chr24g0401711 Lupinus albus HOM05D005782 ORTHO05D007436 4.3e-123 445.7 347 64.3
ATR0626G413 Amborella trichopoda HOM05D005782 ORTHO05D007436 7.3e-123 444.9 416 58.4
MD04G1001800 Malus domestica HOM05D005782 ORTHO05D007436 9.5e-123 444.5 399 59.4
Sc09g0007530 Simmondsia chinensis HOM05D005782 ORTHO05D007436 4.7e-122 442.2 342 68.7
FvH4_4g00180 Fragaria vesca HOM05D005782 ORTHO05D007436 1.1e-121 441.0 369 64.0
TPR.G21340 Trifolium pratense HOM05D005782 ORTHO05D007436 2.3e-121 439.9 348 63.8
MD10G1290500 Malus domestica HOM05D005782 ORTHO05D007436 3.1e-121 439.5 329 68.7
PSO063G1085 Papaver somniferum HOM05D005782 ORTHO05D007436 4.0e-121 439.1 411 58.9
A03p60520 Brassica napus HOM05D005782 ORTHO05D007436 1.5e-120 437.2 291 78.7
BraA03t15091Z Brassica rapa HOM05D005782 ORTHO05D007436 1.5e-120 437.2 291 78.7
PGR142G1608 Punica granatum HOM05D005782 ORTHO05D007436 1.5e-120 437.2 433 58.2
MBI13_g33574_MAGBIO Magnolia biondii HOM05D005782 ORTHO05D007436 2.0e-120 436.8 419 56.3
CAN.G63.1 Capsicum annuum HOM05D005782 ORTHO05D007436 7.5e-120 434.9 413 61.5
PSO170G1242 Papaver somniferum HOM05D005782 ORTHO05D007436 1.3e-119 434.1 437 57.0
arahy.Tifrunner.gnm1.ann1.05JXYY Arachis hypogaea HOM05D005782 ORTHO05D007436 1.7e-119 433.7 431 55.9
Thecc.09G201300 Theobroma cacao HOM05D005782 ORTHO05D007436 4.9e-119 432.2 434 56.9
Sopen07g022440 Solanum pennellii HOM05D005782 ORTHO05D007436 2.4e-118 429.9 416 56.5
arahy.Tifrunner.gnm1.ann1.PZIB41 Arachis hypogaea HOM05D005782 ORTHO05D007436 3.2e-118 429.5 388 58.8
RcHm_v2.0_Chr4g0384781 Rosa chinensis HOM05D005782 ORTHO05D007436 1.2e-117 427.6 411 57.7
Migut.J00857 Erythranthe guttata HOM05D005782 ORTHO05D007436 4.6e-117 425.6 434 58.1
FAN12G2371 Fragaria x ananassa HOM05D005782 ORTHO05D007436 7.8e-117 424.9 400 59.0
Lj2g0003070 Lotus japonicus HOM05D005782 ORTHO05D007436 5.1e-116 422.2 417 57.8
Aqoxy7G02605 Aquilegia oxysepala HOM05D005782 ORTHO05D007436 1.1e-115 421.0 416 54.8
Nitab4.5_0000807g0130 Nicotiana tabacum HOM05D005782 ORTHO05D007436 5.6e-115 418.7 420 58.1
CANSAT80G1379 Cannabis sativa HOM05D005782 ORTHO05D007436 7.6e-112 408.3 442 55.2
Rhsim01G0103700 Rhododendron simsii HOM05D005782 ORTHO05D007436 1.3e-111 407.5 418 54.8
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 1.9e-110 403.7 288 71.2
RhsimUnG0238700 Rhododendron simsii HOM05D005782 ORTHO05D007436 1.2e-109 401.0 428 53.7
AUR62002224 Chenopodium quinoa HOM05D005782 ORTHO05D007436 2.1e-109 400.2 426 54.0
ECA240G2713 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.5e-109 399.4 395 57.7
CDE02G4601 Ceratophyllum demersum HOM05D005782 ORTHO05D007436 6.0e-109 398.7 346 60.7
CiPaw.08G000500 Carya illinoinensis HOM05D005782 ORTHO05D007436 7.8e-109 398.3 242 82.6
Lsat_1_v5_gn_7_57180 Lactuca sativa HOM05D005782 ORTHO05D007436 6.6e-108 395.2 417 54.4
CDE04G3649 Ceratophyllum demersum HOM05D005782 ORTHO05D007436 1.1e-107 394.4 328 63.7
Zm00001eb000750 Zea mays HOM05D005782 ORTHO05D007436 5.8e-104 382.1 382 52.9
Os08g0224300 Oryza sativa ssp. japonica HOM05D005782 ORTHO05D007436 9.9e-104 381.3 384 54.9
Zm00001eb404240 Zea mays HOM05D005782 ORTHO05D007436 3.2e-102 376.3 360 55.0
Zm00001eb000720 Zea mays HOM05D005782 ORTHO05D007436 3.0e-100 369.8 357 54.3
MELO3C003909.2 Cucumis melo HOM05D005782 ORTHO05D007436 1.9e-99 367.1 347 59.7
ClCG11G011190 Citrullus lanatus HOM05D005782 ORTHO05D007436 3.3e-99 366.3 517 46.4
DCAR_014583 Daucus carota HOM05D005782 ORTHO05D010280 4.3e-99 365.9 302 63.9
Cfa012886 Carpinus fangiana HOM05D005782 ORTHO05D007436 1.8e-97 360.5 299 63.2
Psat1g051920 Pisum sativum HOM05D005782 ORTHO05D007436 9.0e-97 358.2 322 58.4
QL11p006989 Quercus lobata HOM05D005782 ORTHO05D007436 2.6e-96 356.7 395 52.4
Hund04583 Selenicereus undatus HOM05D005782 ORTHO05D007436 3.8e-95 352.8 387 52.2
Ca_25640_v3 Cicer arietinum L. HOM05D005782 ORTHO05D007436 1.6e-93 347.4 207 80.2
Duzib150G0032 Durio zibethinus HOM05D005782 ORTHO05D007436 2.3e-92 343.6 374 56.1
vmacro20737 Vaccinium macrocarpon HOM05D005782 ORTHO05D007436 1.9e-91 340.5 436 47.2
BolC7t46295H Brassica oleracea HOM05D005782 ORTHO05D007436 3.1e-89 333.2 317 60.9
C07p58400 Brassica napus HOM05D005782 ORTHO05D007436 5.1e-84 315.8 317 59.3
FAN22G1527 Fragaria x ananassa HOM05D005782 ORTHO05D007436 9.6e-83 311.6 321 55.1
THA.LOC104804495 Tarenaya hassleriana HOM05D005782 ORTHO05D007436 2.4e-81 307.0 176 84.7
Glyma.01G001100 Glycine max HOM05D005782 ORTHO05D007436 3.4e-80 303.1 325 53.5
Medtr6g093210 Medicago truncatula HOM05D005782 ORTHO05D007436 1.0e-79 301.6 350 50.3
Pp3c4_7870 Physcomitrium patens HOM05D005782 ORTHO05D007436 1.7e-79 300.8 389 44.7
Mapoly0066s0016 Marchantia polymorpha HOM05D005782 ORTHO05D007436 7.1e-78 295.4 331 48.0
SEGI_19916 Sequoiadendron giganteum HOM05D005782 ORTHO05D007436 1.6e-77 294.3 294 51.4
FAN17G0526 Fragaria x ananassa HOM05D005782 ORTHO05D007436 4.6e-77 292.7 398 45.5
Pp3c10_12270 Physcomitrium patens HOM05D005782 ORTHO05D007436 6.7e-76 288.9 352 45.2
Ciclev10033693m.g Citrus clementina HOM05D005782 ORTHO05D007436 2.5e-75 287.0 175 78.3
unitig_578.g15870 Utricularia gibba HOM05D000412 ORTHO05D000429 2.8e-74 283.5 354 47.2
HPP92_020428 Vanilla planifolia HOM05D005782 ORTHO05D007436 3.7e-74 283.1 189 72.0
AagrBONN_evm.TU.Sc2ySwM_117.1743 Anthoceros agrestis HOM05D005782 ORTHO05D007436 3.0e-68 263.5 319 46.1
CBR_g84827 Chara braunii HOM05D005782 ORTHO05D007436 8.2e-66 255.4 292 49.0
Lj5A796G22 Lonicera japonica HOM05D005782 ORTHO05D007436 3.4e-64 250.0 259 56.0
Cpa.g.sc91.69 Carica papaya HOM05D005782 ORTHO05D007436 2.1e-61 240.7 292 50.7
Gohir.A05G000250 Gossypium hirsutum HOM05D005782 ORTHO05D007436 5.1e-60 236.1 276 50.7
Phvul.L001608 Phaseolus vulgaris HOM05D005782 ORTHO05D007436 2.9e-55 220.3 206 57.3
Ciclev10033590m.g Citrus clementina HOM05D005782 ORTHO05D007436 1.2e-53 214.9 208 56.7
Peaxi162Scf00474g00221 Petunia axillaris HOM05D005782 ORTHO05D007436 1.0e-47 195.3 137 71.5
A08p18910 Brassica napus HOM05D005782 ORTHO05D007436 1.3e-47 194.9 296 47.6
Peaxi162Scf00474g00214 Petunia axillaris HOM05D005782 ORTHO05D007436 2.6e-43 180.6 248 48.0
Solyc07g042820.3 Solanum lycopersicum HOM05D005782 ORTHO05D007436 2.2e-42 177.6 130 67.7
Solyc07g042800.2 Solanum lycopersicum HOM05D005782 ORTHO05D007436 4.1e-41 173.3 240 43.3
HPP92_020430 Vanilla planifolia HOM05D005782 ORTHO05D007436 2.1e-37 161.0 125 63.2
QL11p007002 Quercus lobata HOM05D005782 ORTHO05D007436 5.9e-32 142.9 79 86.1
Actinidia02524 Actinidia chinensis HOM05D005782 ORTHO05D007436 1.6e-29 134.8 181 44.2
BcaC01g01117 Brassica carinata HOM05D005782 ORTHO05D027183 2.3e-28 131.0 389 33.2
Cre06.g260250 Chlamydomonas reinhardtii HOM05D005782 ORTHO05D007436 1.5e-22 111.7 290 30.0
Dinv26495 Davidia involucrata HOM05D000001 ORTHO05D010280 1.7e-15 88.2 116 44.8
Actinidia02544 Actinidia chinensis HOM05D005782 ORTHO05D007436 1.9e-14 84.7 56 73.2
PRCOL_00003075 Prasinoderma coloniale HOM05D005782 ORTHO05D007436 5.6e-14 83.2 202 29.7
AUR62044089 Chenopodium quinoa HOM05D005782 ORTHO05D007436 9.5e-14 82.4 174 31.6
Lj5A796T24 Lonicera japonica HOM05D005782 ORTHO05D007436 1.6e-13 81.6 52 69.2
AUR62044085 Chenopodium quinoa HOM05D005782 ORTHO05D007436 1.0e-12 79.0 173 31.2
MBI15_g25469_MAGBIO Magnolia biondii HOM05D000031 ORTHO05D000030 2.3e-12 77.8 46 67.4
Solyc07g042810.3 Solanum lycopersicum HOM05D005782 ORTHO05D007436 2.0e-11 74.7 48 81.2
Cfa012883 Carpinus fangiana HOM05D005782 ORTHO05D000300 1.7e-10 71.6 110 42.7
HPP92_020431 Vanilla planifolia HOM05D005782 ORTHO05D007436 7.0e-09 66.2 108 40.7
DCAR_032496 Daucus carota HOM05D006976 ORTHO05D008761 2.0e-08 64.7 80 35.0
SEGI_11203 Sequoiadendron giganteum HOM05D006976 ORTHO05D008761 1.3e-07 62.0 92 30.4
CAN.G129.10 Capsicum annuum HOM05D006976 ORTHO05D008761 1.7e-07 61.6 80 36.2
Sed0001172 Sechium edule HOM05D006976 ORTHO05D008761 2.3e-07 61.2 86 33.7
AL2G20664 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 8.6e-07 59.3 117 27.4
BcaC03g16543 Brassica carinata HOM05D006976 ORTHO05D008761 8.6e-07 59.3 117 27.4
A06p23180 Brassica napus HOM05D006976 ORTHO05D008761 8.6e-07 59.3 117 27.4
C09p40240 Brassica napus HOM05D006976 ORTHO05D008761 8.6e-07 59.3 117 27.4
BolC9t56930H Brassica oleracea HOM05D006976 ORTHO05D008761 8.6e-07 59.3 117 27.4
BolSC29t60590H Brassica oleracea HOM05D006976 ORTHO05D008761 8.6e-07 59.3 117 27.4
BolSC35t60749H Brassica oleracea HOM05D006976 ORTHO05D008761 8.6e-07 59.3 117 27.4
BolSC46t61034H Brassica oleracea HOM05D006976 ORTHO05D008761 8.6e-07 59.3 117 27.4
BolSC47t61096H Brassica oleracea HOM05D006976 ORTHO05D008761 8.6e-07 59.3 117 27.4
BraSC25t45865Z Brassica rapa HOM05D006976 ORTHO05D008761 8.6e-07 59.3 117 27.4
Eucgr.I02539 Eucalyptus grandis HOM05D006976 ORTHO05D008761 1.1e-06 58.9 80 33.8
Migut.D01165 Erythranthe guttata HOM05D006976 ORTHO05D008761 1.5e-06 58.5 80 32.5
SalBow1G3572 Salvia bowleyana HOM05D006976 ORTHO05D008761 1.5e-06 58.5 80 32.5
arahy.Tifrunner.gnm1.ann1.Z0BJS7 Arachis hypogaea HOM05D000806 ORTHO05D002324 1.9e-06 58.2 204 21.1
Gohir.A09G041060 Gossypium hirsutum HOM05D006976 ORTHO05D008761 1.9e-06 58.2 70 37.1
Nn2g14969 Nelumbo nucifera HOM05D006976 ORTHO05D008761 1.9e-06 58.2 202 22.3
Eucgr.E01114 Eucalyptus grandis HOM05D006976 ORTHO05D008761 2.5e-06 57.8 80 33.8
Eucgr.E02607 Eucalyptus grandis HOM05D006976 ORTHO05D008761 2.5e-06 57.8 80 33.8
FvH4_3g27991 Fragaria vesca HOM05D006976 ORTHO05D008761 2.5e-06 57.8 70 35.7
Prupe.7G029500 Prunus persica HOM05D006976 ORTHO05D008761 2.5e-06 57.8 70 35.7
ATCG00530 Arabidopsis thaliana HOM05D006976 ORTHO05D008761 3.3e-06 57.4 117 26.5
Thhalv10010976m.g Eutrema salsugineum HOM05D006976 ORTHO05D008761 3.3e-06 57.4 205 21.5
HanXRQChr01g0020351 Helianthus annuus HOM05D006976 ORTHO05D008761 3.3e-06 57.4 117 25.6
HanXRQChr10g0283561 Helianthus annuus HOM05D006976 ORTHO05D008761 3.3e-06 57.4 117 25.6
HanXRQChr10g0284251 Helianthus annuus HOM05D006976 ORTHO05D008761 3.3e-06 57.4 117 25.6
HanXRQChr10g0289271 Helianthus annuus HOM05D006976 ORTHO05D008761 3.3e-06 57.4 117 25.6
HanXRQChr10g0318191 Helianthus annuus HOM05D006976 ORTHO05D008761 3.3e-06 57.4 117 25.6
HanXRQChr11g0326831 Helianthus annuus HOM05D006976 ORTHO05D008761 3.3e-06 57.4 117 25.6
HanXRQChr15g0497531 Helianthus annuus HOM05D006976 ORTHO05D008761 3.3e-06 57.4 117 25.6
HanXRQChr16g0528991 Helianthus annuus HOM05D006976 ORTHO05D008761 3.3e-06 57.4 117 25.6
HanXRQChr17g0548241 Helianthus annuus HOM05D006976 ORTHO05D008761 3.3e-06 57.4 117 25.6
HanXRQCPg0580041 Helianthus annuus HOM05D006976 ORTHO05D008761 3.3e-06 57.4 117 25.6
EL10Ac4g09265 Beta vulgaris HOM05D006976 ORTHO05D008761 4.3e-06 57.0 80 35.0
C02p43530 Brassica napus HOM05D006976 ORTHO05D008761 4.3e-06 57.0 98 29.6
BraA06t25422Z Brassica rapa HOM05D006976 ORTHO05D008761 4.3e-06 57.0 205 22.0
Oeu012774.1 Olea europaea HOM05D006976 ORTHO05D008761 4.3e-06 57.0 80 31.2
EL10As15g24128 Beta vulgaris HOM05D000806 ORTHO05D002324 5.6e-06 56.6 80 35.0
PSO548G0011 Papaver somniferum HOM05D006976 ORTHO05D008761 5.6e-06 56.6 208 26.0
Lj2P1239T139 Lonicera japonica HOM05D006976 ORTHO05D008761 9.5e-06 55.8 80 30.0
QL93p0999_0001 Quercus lobata HOM05D006976 ORTHO05D008761 9.5e-06 55.8 77 32.5


User provided reference genes

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