Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G18070 Aethionema arabicum HOM05D006694 ORTHO05D008240 4.9e-196 688.7 755 100.0
Aa31LG2G18090 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.1e-195 687.6 755 99.9
Aa31LG2G18100 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.9e-171 607.1 752 93.9
Aa31sc233G40 Aethionema arabicum HOM05D006694 ORTHO05D008240 3.1e-158 563.1 749 81.0
Aa31sc233G60 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.5e-155 553.5 748 76.1
Aa31sc233G30 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.7e-141 506.9 752 83.5
Aa31sc233G50 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.2e-135 487.3 751 78.7
Aa31LG10G10300 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.8e-121 439.1 753 78.6
Aa31LG6G11690 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.7e-68 263.1 189 74.6
Aa31LG6G5330 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.7e-68 263.1 189 74.6
Aa31LG8G12540 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.0e-64 251.5 698 65.8
Aa31LG5G8930 Aethionema arabicum HOM05D006694 ORTHO05D008240 3.4e-64 250.8 189 71.4
Aa31sc233G20 Aethionema arabicum HOM05D006694 ORTHO05D008240 5.0e-63 246.9 319 67.4
Aa31LG5G9000 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.5e-62 244.6 186 71.5
Aa31LG6G11680 Aethionema arabicum HOM05D006694 ORTHO05D008240 4.3e-59 233.8 190 70.0
Aa31LG6G5340 Aethionema arabicum HOM05D006694 ORTHO05D008240 4.3e-59 233.8 190 70.0
Aa31sc233G10 Aethionema arabicum HOM05D006694 ORTHO05D008240 8.5e-55 219.5 191 67.5
Thhalv10006947m.g Eutrema salsugineum HOM05D006694 ORTHO05D008240 2.6e-40 171.4 193 54.4
AL7G24620 Arabidopsis lyrata HOM05D006694 ORTHO05D008240 1.3e-39 169.1 173 59.5
THA.LOC104800448 Tarenaya hassleriana HOM05D006694 ORTHO05D008240 1.6e-37 162.2 164 56.7
CARHR235710 Cardamine hirsuta HOM05D006694 ORTHO05D008240 2.1e-37 161.8 169 58.0
C05p11260 Brassica napus HOM05D006694 ORTHO05D008240 3.3e-35 154.5 144 57.6
BolC5t29875H Brassica oleracea HOM05D006694 ORTHO05D008240 4.4e-35 154.1 144 57.6
BraA06t24145Z Brassica rapa HOM05D006694 ORTHO05D008240 4.4e-35 154.1 144 56.9
Sp1g10540 Schrenkiella parvula HOM05D006694 ORTHO05D008240 1.3e-34 152.5 175 53.7
Aa31LG5G21690 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.2e-34 151.8 190 52.1
A06p09550 Brassica napus HOM05D006694 ORTHO05D008240 1.4e-33 149.1 144 54.9
AT4G28010 Arabidopsis thaliana HOM05D006694 ORTHO05D008240 1.6e-29 135.6 167 49.7
Carub.0007s1279 Capsella rubella HOM05D006694 ORTHO05D008240 1.6e-21 109.0 138 50.7
Aa31LG6G11700 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.1e-21 107.1 87 60.9
Lalb_Chr10g0096081 Lupinus albus HOM05D006694 ORTHO05D008240 8.9e-20 103.2 169 37.9
LjContig00485g0019324 Lotus japonicus HOM05D006694 ORTHO05D008240 9.8e-19 99.8 168 39.9
QL01p017030 Quercus lobata HOM05D006694 ORTHO05D008240 2.8e-18 98.2 157 42.0
Haze_23854 Corylus avellana HOM05D006694 ORTHO05D008240 8.3e-18 96.7 131 42.7
Ca_20213_v3 Cicer arietinum L. HOM05D006694 ORTHO05D008240 1.1e-17 96.3 152 41.4
CiPaw.14G112300 Carya illinoinensis HOM05D006694 ORTHO05D008240 2.4e-17 95.1 176 39.2
Haze_23236 Corylus avellana HOM05D006694 ORTHO05D008240 7.0e-17 93.6 137 42.3
Ca_07624_v3 Cicer arietinum L. HOM05D000278 ORTHO05D008240 9.2e-17 93.2 147 40.8
MD08G1215500 Malus domestica HOM05D006694 ORTHO05D008240 4.5e-16 90.9 150 40.7
FAN08G0107 Fragaria x ananassa HOM05D006694 ORTHO05D008240 7.8e-16 90.1 163 36.2
LjContig00485g0005104 Lotus japonicus HOM05D006694 ORTHO05D008240 1.0e-15 89.7 154 39.0
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 2.9e-15 88.2 128 43.0
FAN18G4320 Fragaria x ananassa HOM05D006694 ORTHO05D008240 3.8e-15 87.8 157 36.9
Aa31sc233G70 Aethionema arabicum HOM05D006694 ORTHO05D008240 5.0e-15 87.4 65 72.3
FvH4_5g33200 Fragaria vesca HOM05D006694 ORTHO05D008240 5.0e-15 87.4 157 36.3
Medtr7g067460 Medicago truncatula HOM05D006694 ORTHO05D008240 6.6e-15 87.0 154 36.4
Phvul.008G105900 Phaseolus vulgaris HOM05D006694 ORTHO05D008240 6.6e-15 87.0 121 41.3
RcHm_v2.0_Chr5g0048941 Rosa chinensis HOM05D006694 ORTHO05D008240 6.6e-15 87.0 157 37.6
TPR.G8137 Trifolium pratense HOM05D006694 ORTHO05D008240 6.6e-15 87.0 128 39.8
Sed0016136 Sechium edule HOM05D006694 ORTHO05D008240 1.1e-14 86.3 136 37.5
Psat3g130440 Pisum sativum HOM05D006694 ORTHO05D008240 1.5e-14 85.9 171 35.7
ClCG03G012530 Citrullus lanatus HOM05D006694 ORTHO05D008240 1.9e-14 85.5 155 35.5
FAN25G2919 Fragaria x ananassa HOM05D006694 ORTHO05D008240 1.9e-14 85.5 162 37.0
PGR031G0070 Punica granatum HOM05D006694 ORTHO05D008240 2.5e-14 85.1 161 35.4
FvH4_3g35120 Fragaria vesca HOM05D006694 ORTHO05D008240 3.3e-14 84.7 157 38.9
Nn7g35871 Nelumbo nucifera HOM05D006694 ORTHO05D008240 3.3e-14 84.7 134 35.8
MELO3C015109.2 Cucumis melo HOM05D006694 ORTHO05D008240 7.3e-14 83.6 147 34.7
VMungo1383G3557 Vigna mungo HOM05D006694 ORTHO05D008240 7.3e-14 83.6 154 36.4
CsaV3_1G043500 Cucumis sativus L. HOM05D006694 ORTHO05D008240 1.2e-13 82.8 136 36.0
FAN11G2736 Fragaria x ananassa HOM05D006694 ORTHO05D008240 1.6e-13 82.4 149 38.3
FAN21G3540 Fragaria x ananassa HOM05D006694 ORTHO05D008240 2.1e-13 82.0 174 35.1
SalBow5G3658 Salvia bowleyana HOM05D006694 ORTHO05D008240 3.6e-13 81.3 155 36.1
SalBow5G5172 Salvia bowleyana HOM05D006694 ORTHO05D008240 3.6e-13 81.3 155 36.1
TWI79G1258 Tripterygium wilfordii HOM05D006694 ORTHO05D008240 6.1e-13 80.5 140 37.1
Cfa011326 Carpinus fangiana HOM05D006694 ORTHO05D008240 1.0e-12 79.7 160 35.6
AUR62006546 Chenopodium quinoa HOM05D006694 ORTHO05D008240 1.0e-12 79.7 101 42.6
SalBow6G6606 Salvia bowleyana HOM05D006694 ORTHO05D008240 1.0e-12 79.7 165 35.8
CSS0033907 Camellia sinensis var. sinensis HOM05D006694 ORTHO05D008240 1.4e-12 79.3 160 35.0
Glyma.07G147400 Glycine max HOM05D006694 ORTHO05D008240 1.4e-12 79.3 130 36.2
Sc16g0011010 Simmondsia chinensis HOM05D006694 ORTHO05D008240 1.4e-12 79.3 178 33.7
Ah.06g194610 Amaranthus hybridus HOM05D006694 ORTHO05D008240 2.3e-12 78.6 99 43.4
Solyc07g064625.1 Solanum lycopersicum HOM05D006694 ORTHO05D008240 8.9e-12 76.6 138 35.5
TAR633G1767 Trochodendron aralioides HOM05D006694 ORTHO05D008240 8.9e-12 76.6 137 35.0
Sopen07g032820 Solanum pennellii HOM05D006694 ORTHO05D008240 1.5e-11 75.9 138 34.8
Lj1g0001110 Lotus japonicus HOM05D006694 ORTHO05D010126 2.0e-11 75.5 148 37.2
Hma1.2p1_1099F.1_g256830 Hydrangea macrophylla HOM05D006694 ORTHO05D008240 4.4e-11 74.3 148 34.5
Nitab4.5_0000730g0020 Nicotiana tabacum HOM05D006694 ORTHO05D008240 4.4e-11 74.3 135 37.0
PGSC0003DMG400022317 Solanum tuberosum HOM05D006694 ORTHO05D008240 4.4e-11 74.3 138 34.8
EL10Ac4g10114 Beta vulgaris HOM05D006694 ORTHO05D008240 5.8e-11 73.9 89 43.8
SalBow6G6418 Salvia bowleyana HOM05D006694 ORTHO05D008240 2.9e-10 71.6 134 36.6
CAN.G337.135 Capsicum annuum HOM05D006694 ORTHO05D008240 8.3e-10 70.1 138 33.3
Nitab4.5_0001500g0030 Nicotiana tabacum HOM05D006694 ORTHO05D008240 1.1e-09 69.7 135 35.6
Migut.D00664 Erythranthe guttata HOM05D006694 ORTHO05D008240 1.4e-09 69.3 127 33.9
Eucgr.G03208 Eucalyptus grandis HOM05D006694 ORTHO05D008240 4.1e-09 67.8 69 47.8
Oeu043278.1 Olea europaea HOM05D006694 ORTHO05D008240 7.0e-09 67.0 101 38.6
SGA_v2.0_scaffold29G12231 Striga asiatica HOM05D006694 ORTHO05D008240 7.0e-09 67.0 128 31.2
BcaB07g33547 Brassica carinata HOM05D006694 ORTHO05D014504 9.2e-09 66.6 76 52.6
Prupe.1G547200 Prunus persica HOM05D006694 ORTHO05D008240 1.6e-08 65.9 79 46.8
BcaC05g25242 Brassica carinata HOM05D006694 ORTHO05D008240 3.5e-08 64.7 91 63.7
Nitab4.5_0003488g0040 Nicotiana tabacum HOM05D006694 ORTHO05D008240 3.5e-08 64.7 166 32.5
Aqoxy1G00470 Aquilegia oxysepala HOM05D006694 ORTHO05D008240 6.0e-08 63.9 158 29.7
MBI11_g34855_MAGBIO Magnolia biondii HOM05D000162 ORTHO05D000090 6.0e-08 63.9 101 33.7
BolC2t07316H Brassica oleracea HOM05D012099 ORTHO05D014504 5.0e-07 60.8 43 69.8
BolC9t53522H Brassica oleracea HOM05D012099 ORTHO05D014504 5.0e-07 60.8 43 69.8
Lsat_1_v5_gn_9_9621 Lactuca sativa HOM05D000162 ORTHO05D000090 1.1e-06 59.7 91 34.1
MBI04_g37009_MAGBIO Magnolia biondii HOM05D006694 ORTHO05D008240 1.5e-06 59.3 127 29.9
Cfa009864 Carpinus fangiana HOM05D006694 ORTHO05D008240 1.9e-06 58.9 136 31.6
C03p32380 Brassica napus HOM05D012099 ORTHO05D014504 2.5e-06 58.5 47 61.7
C07p23600 Brassica napus HOM05D012099 ORTHO05D014504 2.5e-06 58.5 47 61.7
BcaB02g10473 Brassica carinata HOM05D012099 ORTHO05D014504 7.3e-06 57.0 41 68.3


User provided reference genes

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