Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G17680 Aethionema arabicum HOM05D000117 ORTHO05D004016 1.8e-91 339.3 187 100.0
Carub.0007s0831 Capsella rubella HOM05D000117 ORTHO05D004016 1.3e-28 130.6 179 52.0
AT4G32280 Arabidopsis thaliana HOM05D000117 ORTHO05D004016 3.7e-28 129.0 178 49.4
CARHR240170 Cardamine hirsuta HOM05D000117 ORTHO05D004016 1.6e-26 123.6 187 47.1
A03p61280 Brassica napus HOM05D000117 ORTHO05D004016 2.6e-21 106.3 211 41.2
BraA03t15172Z Brassica rapa HOM05D000117 ORTHO05D004016 2.6e-21 106.3 211 41.2
BcaNung03580 Brassica carinata HOM05D000117 ORTHO05D004016 2.9e-20 102.8 214 38.3
C07p59140 Brassica napus HOM05D000117 ORTHO05D004016 2.9e-20 102.8 214 38.3
AL7G19570 Arabidopsis lyrata HOM05D000117 ORTHO05D004016 1.1e-19 100.9 213 45.1
BolC7t46367H Brassica oleracea HOM05D000117 ORTHO05D004016 3.2e-19 99.4 214 38.3
Thhalv10027347m.g Eutrema salsugineum HOM05D000117 ORTHO05D004016 4.1e-19 99.0 218 42.2
BcaB03g12739 Brassica carinata HOM05D000117 ORTHO05D004016 2.7e-18 96.3 216 39.4
A01p06110 Brassica napus HOM05D000117 ORTHO05D004016 1.9e-16 90.1 200 37.0
BraA01t00575Z Brassica rapa HOM05D000117 ORTHO05D004016 1.9e-16 90.1 200 37.0
Sp7g30030 Schrenkiella parvula HOM05D000117 ORTHO05D004016 2.6e-13 79.7 180 40.0
BcaC09g52009 Brassica carinata HOM05D000117 ORTHO05D004016 3.7e-12 75.9 167 38.9
C01p06730 Brassica napus HOM05D000117 ORTHO05D004016 3.7e-12 75.9 167 38.9
BolC1t00665H Brassica oleracea HOM05D000117 ORTHO05D004016 3.7e-12 75.9 167 38.9
BcaNung05960 Brassica carinata HOM05D000117 ORTHO05D004016 6.4e-12 75.1 167 39.5
Duzib168G0601 Durio zibethinus HOM05D000054 ORTHO05D008307 5.4e-11 72.0 143 38.5
Gohir.A05G053500 Gossypium hirsutum HOM05D000117 ORTHO05D004016 1.6e-10 70.5 128 41.4
Gorai.009G058600 Gossypium raimondii HOM05D000117 ORTHO05D004016 7.8e-10 68.2 128 40.6
Potri.006G255200 Populus trichocarpa HOM05D000117 ORTHO05D004016 3.9e-09 65.9 145 35.2
Actinidia22338 Actinidia chinensis HOM05D000117 ORTHO05D004016 4.3e-08 62.4 190 34.2
Actinidia26378 Actinidia chinensis HOM05D000117 ORTHO05D004016 4.3e-08 62.4 190 35.8
FAN15G1324 Fragaria x ananassa HOM05D000117 ORTHO05D004016 7.3e-08 61.6 213 28.6
Gohir.D05G057500 Gossypium hirsutum HOM05D000117 ORTHO05D004016 9.6e-08 61.2 129 38.8
QL02p021548 Quercus lobata HOM05D000117 ORTHO05D004016 2.1e-07 60.1 112 36.6
Peaxi162Scf00643g00021 Petunia axillaris HOM05D000117 ORTHO05D004016 3.6e-07 59.3 185 30.3
CSS0019988 Camellia sinensis var. sinensis HOM05D000117 ORTHO05D004016 6.2e-07 58.5 143 34.3
Glyma.04G066300 Glycine max HOM05D000117 ORTHO05D004016 6.2e-07 58.5 187 29.9
Dinv08637 Davidia involucrata HOM05D000117 ORTHO05D004016 1.1e-06 57.8 156 32.1
Atru.chr7.1110 Acer truncatum HOM05D000117 ORTHO05D004016 1.4e-06 57.4 162 37.7
Actinidia13229 Actinidia chinensis HOM05D000117 ORTHO05D004016 1.4e-06 57.4 187 32.6
FvH4_2g28970 Fragaria vesca HOM05D000117 ORTHO05D004016 1.8e-06 57.0 212 27.8
Sabra06G0199500 Salix brachista HOM05D000117 ORTHO05D004016 1.8e-06 57.0 135 34.1
TWI34G0446 Tripterygium wilfordii HOM05D000117 ORTHO05D004016 1.8e-06 57.0 116 37.9
Actinidia38728 Actinidia chinensis HOM05D000117 ORTHO05D004016 3.1e-06 56.2 184 34.8
FAN24G0168 Fragaria x ananassa HOM05D000054 ORTHO05D008307 3.1e-06 56.2 212 27.8
FAN27G0317 Fragaria x ananassa HOM05D000117 ORTHO05D004016 3.1e-06 56.2 187 28.9
Manes.16G122601 Manihot esculenta HOM05D000117 ORTHO05D004016 3.1e-06 56.2 49 61.2
MELO3C003701.2 Cucumis melo HOM05D000117 ORTHO05D004016 5.2e-06 55.5 189 29.1
Sabra18G0029400 Salix brachista HOM05D000117 ORTHO05D017707 5.2e-06 55.5 134 35.1
COL.COLO4_18864 Corchorus olitorius HOM05D000117 ORTHO05D004016 6.8e-06 55.1 41 65.9
Oeu053119.1 Olea europaea HOM05D000117 ORTHO05D004016 6.8e-06 55.1 51 56.9


User provided reference genes

Program Settings