Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G16450 Aethionema arabicum HOM05D006107 ORTHO05D007455 0.0e+00 1180.2 589 100.0
AL7G17360 Arabidopsis lyrata HOM05D006107 ORTHO05D007455 2.6e-309 1064.7 589 90.5
AT4G34030 Arabidopsis thaliana HOM05D006107 ORTHO05D007455 2.6e-309 1064.7 589 90.2
Sp7g31760 Schrenkiella parvula HOM05D006107 ORTHO05D007455 9.8e-309 1062.8 589 89.3
Thhalv10024753m.g Eutrema salsugineum HOM05D006107 ORTHO05D007455 1.3e-308 1062.4 589 89.5
Carub.0007s0637 Capsella rubella HOM05D006107 ORTHO05D007455 1.2e-303 1045.8 589 88.1
BraA08t33679Z Brassica rapa HOM05D006107 ORTHO05D007455 8.9e-302 1039.6 589 88.1
A08p17180 Brassica napus HOM05D006107 ORTHO05D007455 1.2e-301 1039.3 589 87.9
THA.LOC104807265 Tarenaya hassleriana HOM05D006107 ORTHO05D007455 2.0e-301 1038.5 590 87.1
BcaC01g00937 Brassica carinata HOM05D006107 ORTHO05D007455 2.9e-300 1034.6 589 87.4
BcaB03g11861 Brassica carinata HOM05D006107 ORTHO05D007455 3.7e-300 1034.2 589 87.1
C03p86150 Brassica napus HOM05D006107 ORTHO05D007455 1.1e-299 1032.7 589 87.3
BolC3t20903H Brassica oleracea HOM05D006107 ORTHO05D007455 1.4e-299 1032.3 589 87.3
C07p60130 Brassica napus HOM05D006107 ORTHO05D007455 7.0e-299 1030.0 590 87.5
BolC7t46453H Brassica oleracea HOM05D006107 ORTHO05D007455 3.5e-298 1027.7 590 87.3
A03p62570 Brassica napus HOM05D006107 ORTHO05D007455 1.0e-297 1026.2 590 87.1
BcaNung03357 Brassica carinata HOM05D006107 ORTHO05D007455 3.2e-283 978.0 590 83.9
Duzib132G0557 Durio zibethinus HOM05D006107 ORTHO05D007455 4.9e-276 954.1 553 82.8
Thecc.02G102000 Theobroma cacao HOM05D006107 ORTHO05D007455 1.1e-275 953.0 546 83.9
Gohir.A12G023600 Gossypium hirsutum HOM05D006107 ORTHO05D007455 1.4e-275 952.6 546 83.2
Gorai.008G024600 Gossypium raimondii HOM05D006107 ORTHO05D007455 1.2e-274 949.5 546 83.0
TWI31G1484 Tripterygium wilfordii HOM05D006107 ORTHO05D007455 1.2e-274 949.5 589 77.9
Gohir.D12G024200 Gossypium hirsutum HOM05D006107 ORTHO05D007455 2.1e-274 948.7 546 82.8
Sabra09G0076700 Salix brachista HOM05D006107 ORTHO05D007455 1.0e-273 946.4 559 80.9
Potri.009G100800 Populus trichocarpa HOM05D006107 ORTHO05D007455 1.3e-273 946.0 560 80.5
Atru.chr5.2684 Acer truncatum HOM05D006107 ORTHO05D007455 2.4e-270 935.3 543 81.8
PGR042G0079 Punica granatum HOM05D006107 ORTHO05D007455 3.1e-270 934.9 553 81.7
CsaV3_7G008530 Cucumis sativus L. HOM05D006107 ORTHO05D007455 5.3e-270 934.1 547 81.4
Ciclev10028103m.g Citrus clementina HOM05D006107 ORTHO05D007455 2.0e-269 932.2 542 82.3
Hma1.2p1_0474F.1_g160480 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 7.6e-269 930.2 546 81.3
QL11p035424 Quercus lobata HOM05D006107 ORTHO05D007455 1.7e-268 929.1 548 80.7
FAN20G2345 Fragaria x ananassa HOM05D006107 ORTHO05D007455 2.9e-268 928.3 548 80.8
Sed0010263 Sechium edule HOM05D006107 ORTHO05D007455 6.4e-268 927.2 553 80.7
FAN15G1599 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.4e-267 926.0 548 80.8
arahy.Tifrunner.gnm1.ann1.Q9TTL4 Arachis hypogaea HOM05D006107 ORTHO05D007455 3.2e-267 924.9 549 80.3
RcHm_v2.0_Chr6g0257681 Rosa chinensis HOM05D006107 ORTHO05D007455 4.2e-267 924.5 548 80.3
FvH4_2g05870 Fragaria vesca HOM05D006107 ORTHO05D007455 5.4e-267 924.1 548 80.7
GSVIVG01031728001 Vitis vinifera HOM05D006107 ORTHO05D007455 9.3e-267 923.3 585 75.7
Eucgr.G01434 Eucalyptus grandis HOM05D006107 ORTHO05D007455 2.1e-266 922.2 547 79.9
Lalb_Chr16g0384781 Lupinus albus HOM05D006107 ORTHO05D007455 7.9e-266 920.2 547 79.5
Prupe.8G126800 Prunus persica HOM05D006107 ORTHO05D007455 1.0e-265 919.8 589 76.2
FAN24G1318 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.3e-265 919.5 548 80.3
CSS0002619 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 3.9e-265 917.9 550 80.2
Rhsim05G0085900 Rhododendron simsii HOM05D006107 ORTHO05D007455 3.9e-265 917.9 550 80.4
CSS0005791 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 5.1e-265 917.5 550 80.2
MD05G1082300 Malus domestica HOM05D006107 ORTHO05D007455 8.7e-265 916.8 589 76.1
Lj5A210T89 Lonicera japonica HOM05D006107 ORTHO05D007455 3.3e-264 914.8 591 76.3
ClCG02G006000 Citrullus lanatus HOM05D006107 ORTHO05D007455 8.1e-263 910.2 582 75.9
Lj4g0016203 Lotus japonicus HOM05D006107 ORTHO05D007455 3.1e-262 908.3 547 79.2
Psat7g125400 Pisum sativum HOM05D006107 ORTHO05D007455 9.0e-262 906.7 551 77.9
RcHm_v2.0_Chr6g0257701 Rosa chinensis HOM05D006107 ORTHO05D007455 2.0e-261 905.6 548 78.5
CANSAT25G2960 Cannabis sativa HOM05D006107 ORTHO05D007455 4.5e-261 904.4 544 80.9
Medtr4g085890 Medicago truncatula HOM05D006107 ORTHO05D007455 9.9e-261 903.3 551 78.0
EL10Ac1g02230 Beta vulgaris HOM05D006107 ORTHO05D007455 1.7e-260 902.5 550 78.0
Glyma.07G213500 Glycine max HOM05D006107 ORTHO05D007455 8.4e-260 900.2 526 81.6
MBI03_g13479_MAGBIO Magnolia biondii HOM05D006107 ORTHO05D007455 8.4e-260 900.2 589 74.5
TAR376G0662 Trochodendron aralioides HOM05D006107 ORTHO05D007455 9.3e-259 896.7 589 74.5
HPP92_004071 Vanilla planifolia HOM05D006107 ORTHO05D007455 1.6e-258 896.0 544 79.4
Glyma.02G131500 Glycine max HOM05D006107 ORTHO05D007455 3.5e-258 894.8 522 81.8
Phvul.003G291600 Phaseolus vulgaris HOM05D006107 ORTHO05D007455 3.5e-258 894.8 522 81.4
TPR.G12695 Trifolium pratense HOM05D006107 ORTHO05D007455 3.5e-258 894.8 522 81.0
arahy.Tifrunner.gnm1.ann1.H5D5IL Arachis hypogaea HOM05D006107 ORTHO05D007455 7.9e-258 893.6 575 75.7
VMungo0251G2128 Vigna mungo HOM05D006107 ORTHO05D007455 7.9e-258 893.6 525 81.0
AUR62035403 Chenopodium quinoa HOM05D006107 ORTHO05D007455 1.0e-257 893.3 583 74.6
PSO675G2583 Papaver somniferum HOM05D006107 ORTHO05D007455 1.0e-257 893.3 542 79.5
Peaxi162Scf00016g01935 Petunia axillaris HOM05D006107 ORTHO05D007455 1.0e-257 893.3 542 80.1
HanXRQChr11g0331361 Helianthus annuus HOM05D006107 ORTHO05D007455 1.8e-257 892.5 578 74.2
Hund06173 Selenicereus undatus HOM05D006107 ORTHO05D007455 1.8e-257 892.5 548 77.9
PSO541G4551 Papaver somniferum HOM05D006107 ORTHO05D007455 3.0e-257 891.7 542 79.5
Ca_18695_v3 Cicer arietinum L. HOM05D006107 ORTHO05D007455 3.9e-257 891.3 521 80.6
SGA_v2.0_scaffold90G27632 Striga asiatica HOM05D006107 ORTHO05D007455 3.9e-257 891.3 589 75.2
Sc18g0004170 Simmondsia chinensis HOM05D006107 ORTHO05D007455 5.1e-257 891.0 546 78.4
Aqoxy6G01306 Aquilegia oxysepala HOM05D006107 ORTHO05D007455 1.1e-256 889.8 591 72.8
COL.COLO4_32644 Corchorus olitorius HOM05D006107 ORTHO05D007455 1.5e-256 889.4 544 79.4
ECA236G2832 Erigeron canadensis HOM05D006107 ORTHO05D007455 7.4e-256 887.1 541 79.3
Haze_10087 Corylus avellana HOM05D006107 ORTHO05D007455 6.2e-255 884.0 589 73.7
Migut.B00356 Erythranthe guttata HOM05D006107 ORTHO05D007455 8.2e-255 883.6 546 78.4
SalBow6G1673 Salvia bowleyana HOM05D006107 ORTHO05D007455 8.2e-255 883.6 547 78.6
Lsat_1_v5_gn_7_86820 Lactuca sativa HOM05D006107 ORTHO05D007455 1.1e-254 883.2 578 74.9
Cfa004529 Carpinus fangiana HOM05D006107 ORTHO05D007455 5.8e-253 877.5 508 82.3
Cc02_g18880 Coffea canephora HOM05D006107 ORTHO05D007455 7.6e-253 877.1 521 81.4
CARHR242170 Cardamine hirsuta HOM05D006107 ORTHO05D007455 4.9e-252 874.4 468 91.0
CAN.G1041.37 Capsicum annuum HOM05D006107 ORTHO05D007455 9.3e-251 870.2 542 78.2
Nitab4.5_0018866g0010 Nicotiana tabacum HOM05D006107 ORTHO05D007455 6.0e-250 867.5 583 74.1
vmacro19505 Vaccinium macrocarpon HOM05D006107 ORTHO05D007455 7.9e-250 867.1 692 64.7
Solyc01g108030.4 Solanum lycopersicum HOM05D006107 ORTHO05D007455 3.9e-249 864.8 541 77.4
Sopen01g050230 Solanum pennellii HOM05D006107 ORTHO05D007455 6.7e-249 864.0 541 77.3
DCAR_001629 Daucus carota HOM05D006107 ORTHO05D007455 1.8e-246 855.9 521 78.7
Zm00001eb179170 Zea mays HOM05D006107 ORTHO05D007455 3.1e-246 855.1 540 75.9
ATR1126G046 Amborella trichopoda HOM05D006107 ORTHO05D007455 2.0e-245 852.4 544 74.6
PGSC0003DMG400025888 Solanum tuberosum HOM05D006107 ORTHO05D007455 1.7e-244 849.4 521 79.1
CDE10G1185 Ceratophyllum demersum HOM05D006107 ORTHO05D007455 1.6e-242 842.8 546 75.1
Dinv42164 Davidia involucrata HOM05D006107 ORTHO05D007455 1.6e-242 842.8 542 76.4
Nitab4.5_0001428g0130 Nicotiana tabacum HOM05D006107 ORTHO05D007455 1.9e-240 835.9 542 75.5
unitig_21.g20740 Utricularia gibba HOM05D006107 ORTHO05D007455 6.5e-236 820.8 542 75.1
Cpa.g.sc62.2 Carica papaya HOM05D006107 ORTHO05D007455 3.0e-233 812.0 502 79.3
MELO3C018456.2 Cucumis melo HOM05D006107 ORTHO05D007455 2.0e-232 809.3 507 77.7
Mapoly0009s0150 Marchantia polymorpha HOM05D006107 ORTHO05D007455 3.3e-232 808.5 550 70.9
Pp3c3_22750 Physcomitrium patens HOM05D006107 ORTHO05D007455 3.1e-230 802.0 542 70.3
FAN27G3033 Fragaria x ananassa HOM05D006107 ORTHO05D007455 2.2e-228 795.8 521 74.9
Nn5g30280 Nelumbo nucifera HOM05D006107 ORTHO05D007455 1.4e-225 786.6 468 80.1
Oeu007292.2 Olea europaea HOM05D006107 ORTHO05D007455 5.2e-225 784.6 469 80.0
AagrBONN_evm.TU.Sc2ySwM_368.3420 Anthoceros agrestis HOM05D006107 ORTHO05D007455 5.7e-224 781.2 542 69.4
Manes.07G078100 Manihot esculenta HOM05D006107 ORTHO05D007455 4.2e-219 765.0 443 83.3
HPP92_004116 Vanilla planifolia HOM05D006107 ORTHO05D007455 3.6e-218 761.9 544 69.9
CiPaw.05G007100 Carya illinoinensis HOM05D006107 ORTHO05D007455 8.8e-217 757.3 439 81.8
SEGI_09747 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 4.8e-215 751.5 466 78.1
SMO174G0062 Selaginella moellendorffii HOM05D006107 ORTHO05D007455 6.1e-202 708.0 542 64.8
Cre03.g181200 Chlamydomonas reinhardtii HOM05D006107 ORTHO05D007455 8.3e-191 671.0 544 60.8
AUR62041887 Chenopodium quinoa HOM05D006107 ORTHO05D007455 2.0e-189 666.4 464 70.5
Haze_26655 Corylus avellana HOM05D006107 ORTHO05D007455 6.0e-173 611.7 553 56.1
Actinidia17868 Actinidia chinensis HOM05D006107 ORTHO05D007455 1.5e-168 597.0 556 57.2
PRCOL_00006414 Prasinoderma coloniale HOM05D006107 ORTHO05D007455 9.2e-166 587.8 528 57.4
Haze_27116 Corylus avellana HOM05D006107 ORTHO05D007455 1.8e-153 547.0 461 58.4
Haze_27030 Corylus avellana HOM05D006107 ORTHO05D007455 5.1e-148 528.9 502 54.6
Ah.00g000150 Amaranthus hybridus HOM05D006107 ORTHO05D007455 3.0e-140 503.1 331 74.0
Hma1.2p1_0474F.1_g160470 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 2.2e-127 460.3 259 84.6
Haze_26656 Corylus avellana HOM05D006107 ORTHO05D007455 1.9e-86 324.3 254 61.8
QL11p035444 Quercus lobata HOM05D006107 ORTHO05D007455 8.0e-77 292.4 158 85.4
CBR_g54985 Chara braunii HOM05D006107 ORTHO05D007455 2.4e-57 227.6 491 31.4
CARHR242160 Cardamine hirsuta HOM05D006107 ORTHO05D007455 2.9e-42 177.6 123 76.4
Medtr3g011860 Medicago truncatula HOM05D006107 ORTHO05D007455 9.6e-38 162.5 208 45.7
QL11p035447 Quercus lobata HOM05D006107 ORTHO05D007455 5.1e-31 140.2 88 75.0
Cfa025742 Carpinus fangiana HOM05D006107 ORTHO05D007455 3.3e-30 137.5 542 24.5
QL11p035449 Quercus lobata HOM05D006107 ORTHO05D007455 6.2e-21 106.7 65 72.3
SEGI_09117 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 2.0e-19 101.7 106 50.9
CDE05G3043 Ceratophyllum demersum HOM05D003397 ORTHO05D004390 2.7e-08 64.7 380 24.2
Solyc01g108060.2 Solanum lycopersicum HOM05D006107 ORTHO05D007455 3.3e-06 57.8 30 83.3


User provided reference genes

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