Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G16400 Aethionema arabicum HOM05D009953 ORTHO05D003195 4.5e-124 448.0 231 100.0
Sp7g31710 Schrenkiella parvula HOM05D009953 ORTHO05D003195 8.3e-70 267.7 232 63.8
Sp7g31720 Schrenkiella parvula HOM05D009953 ORTHO05D003195 3.5e-68 262.3 236 61.9
Thhalv10026267m.g Eutrema salsugineum HOM05D009953 ORTHO05D003195 4.9e-62 241.9 229 59.8
CARHR242110 Cardamine hirsuta HOM05D009953 ORTHO05D003195 1.2e-60 237.3 220 60.9
AL7G17410 Arabidopsis lyrata HOM05D009953 ORTHO05D003195 1.9e-58 229.9 238 58.0
BcaC01g00943 Brassica carinata HOM05D009953 ORTHO05D003195 6.2e-57 224.9 231 60.6
BolC3t20907H Brassica oleracea HOM05D009953 ORTHO05D003195 2.9e-54 216.1 228 59.6
BolC7t46450H Brassica oleracea HOM05D009953 ORTHO05D003195 4.9e-54 215.3 231 57.6
C07p60100 Brassica napus HOM05D009953 ORTHO05D003195 4.1e-53 212.2 231 57.1
BcaNung03785 Brassica carinata HOM05D009953 ORTHO05D003195 9.2e-53 211.1 230 57.0
C03p86190 Brassica napus HOM05D009953 ORTHO05D003195 3.5e-52 209.1 226 58.4
BolC1t00464H Brassica oleracea HOM05D009953 ORTHO05D003195 2.3e-51 206.5 228 56.6
BcaB03g11864 Brassica carinata HOM05D009953 ORTHO05D003195 6.6e-51 204.9 233 59.2
BraA01t00428Z Brassica rapa HOM05D009953 ORTHO05D003195 1.9e-50 203.4 227 56.8
BraA03t15320Z Brassica rapa HOM05D009953 ORTHO05D003195 5.6e-50 201.8 230 54.8
A03p62520 Brassica napus HOM05D009953 ORTHO05D003195 2.8e-49 199.5 230 55.2
AT4G33980 Arabidopsis thaliana HOM05D009953 ORTHO05D003195 6.8e-48 194.9 195 57.9
C01p04800 Brassica napus HOM05D009953 ORTHO05D003195 8.9e-48 194.5 228 53.9
BcaNung03354 Brassica carinata HOM05D000546 ORTHO05D000398 1.2e-47 194.1 230 55.7
Carub.0007s0642 Capsella rubella HOM05D009953 ORTHO05D003195 1.7e-46 190.3 248 51.2
A08p17220 Brassica napus HOM05D009953 ORTHO05D003195 3.8e-46 189.1 230 56.1
BraA08t33685Z Brassica rapa HOM05D009953 ORTHO05D003195 1.4e-45 187.2 229 55.9
THA.LOC104819577 Tarenaya hassleriana HOM05D009953 ORTHO05D003195 3.6e-41 172.6 248 45.6
THA.LOC104807270 Tarenaya hassleriana HOM05D009953 ORTHO05D003195 3.6e-33 146.0 231 42.9
A01p04400 Brassica napus HOM05D009953 ORTHO05D003195 5.3e-32 142.1 185 51.9
Dinv42162 Davidia involucrata HOM05D003792 ORTHO05D003195 1.5e-18 97.4 222 33.3
Cpa.g.sc62.6 Carica papaya HOM05D003792 ORTHO05D003195 1.8e-16 90.5 206 35.9
GSVIVG01031734001 Vitis vinifera HOM05D003792 ORTHO05D003195 1.2e-15 87.8 231 33.3
Dinv15716 Davidia involucrata HOM05D003792 ORTHO05D003195 2.0e-15 87.0 227 33.9
Cc02_g18840 Coffea canephora HOM05D011234 ORTHO05D003195 1.6e-12 77.4 239 32.6
Oeu025580.1 Olea europaea HOM05D003792 ORTHO05D003195 3.5e-12 76.3 233 31.8
COL.COLO4_32649 Corchorus olitorius HOM05D003465 ORTHO05D004034 4.6e-12 75.9 98 50.0
PSO210G6487 Papaver somniferum HOM05D003792 ORTHO05D003195 1.3e-11 74.3 203 32.0
TAR381G1051 Trochodendron aralioides HOM05D003792 ORTHO05D003195 1.3e-11 74.3 207 33.3
Lalb_Chr05g0219211 Lupinus albus HOM05D003792 ORTHO05D003195 3.9e-11 72.8 230 31.3
Gohir.A12G023800 Gossypium hirsutum HOM05D003792 ORTHO05D003195 5.1e-11 72.4 207 33.8
Manes.18G037600 Manihot esculenta HOM05D003792 ORTHO05D003195 5.1e-11 72.4 214 32.2
Potri.002G125900 Populus trichocarpa HOM05D003792 ORTHO05D003195 6.7e-11 72.0 241 32.0
Thecc.02G101400 Theobroma cacao HOM05D003792 ORTHO05D003195 1.1e-10 71.2 231 33.3
CANSAT25G3506 Cannabis sativa HOM05D003792 ORTHO05D003195 1.5e-10 70.9 224 33.0
CANSAT25G2784 Cannabis sativa HOM05D003792 ORTHO05D003195 1.9e-10 70.5 224 34.4
FAN15G1261 Fragaria x ananassa HOM05D003792 ORTHO05D003195 2.5e-10 70.1 202 30.2
Medtr4g085990 Medicago truncatula HOM05D003792 ORTHO05D003195 2.5e-10 70.1 228 29.4
Aqoxy6G01313 Aquilegia oxysepala HOM05D003792 ORTHO05D003195 3.3e-10 69.7 213 29.6
arahy.Tifrunner.gnm1.ann1.ND8QY1 Arachis hypogaea HOM05D003792 ORTHO05D003195 3.3e-10 69.7 235 28.9
arahy.Tifrunner.gnm1.ann1.V1SQNE Arachis hypogaea HOM05D003792 ORTHO05D003195 3.3e-10 69.7 235 28.9
FvH4_2g34400 Fragaria vesca HOM05D003792 ORTHO05D003195 7.4e-10 68.6 203 30.5
TAR376G0615 Trochodendron aralioides HOM05D003792 ORTHO05D003195 7.4e-10 68.6 244 31.6
vmacro02043 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 9.7e-10 68.2 73 49.3
TWI36G1706 Tripterygium wilfordii HOM05D003792 ORTHO05D003195 1.3e-09 67.8 252 30.2
Dinv35957 Davidia involucrata HOM05D003792 ORTHO05D003195 1.6e-09 67.4 240 30.0
QL11p035325 Quercus lobata HOM05D003792 ORTHO05D003195 2.8e-09 66.6 200 30.5
Duzib248G0608 Durio zibethinus HOM05D003792 ORTHO05D003195 3.7e-09 66.2 233 33.9
Glyma.14G083000 Glycine max HOM05D003792 ORTHO05D003195 3.7e-09 66.2 195 29.2
Gohir.D12G024500 Gossypium hirsutum HOM05D003792 ORTHO05D003195 3.7e-09 66.2 221 32.1
VMungo0647G0635 Vigna mungo HOM05D003792 ORTHO05D003195 3.7e-09 66.2 201 30.3
Actinidia00436 Actinidia chinensis HOM05D003792 ORTHO05D003195 4.8e-09 65.9 235 34.0
PGSC0003DMG400006224 Solanum tuberosum HOM05D011234 ORTHO05D003195 4.8e-09 65.9 222 29.3
Gorai.008G024800 Gossypium raimondii HOM05D003792 ORTHO05D003195 6.3e-09 65.5 221 32.1
Phvul.003G291900 Phaseolus vulgaris HOM05D003792 ORTHO05D003195 6.3e-09 65.5 189 31.2
VMungo0251G0642 Vigna mungo HOM05D003792 ORTHO05D003195 8.2e-09 65.1 228 29.8
Gohir.A06G018700 Gossypium hirsutum HOM05D003792 ORTHO05D003195 1.1e-08 64.7 226 30.5
CSS0015140 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 1.8e-08 63.9 227 30.8
RcHm_v2.0_Chr6g0307971 Rosa chinensis HOM05D003792 ORTHO05D003195 1.8e-08 63.9 204 29.4
TWI36G0999 Tripterygium wilfordii HOM05D003792 ORTHO05D003195 1.8e-08 63.9 245 30.6
Glyma.17G242100 Glycine max HOM05D003792 ORTHO05D003195 2.4e-08 63.5 191 30.4
MD08G1101100 Malus domestica HOM05D003792 ORTHO05D003195 3.1e-08 63.2 203 29.6
CDE04G2954 Ceratophyllum demersum HOM05D000925 ORTHO05D002746 4.1e-08 62.8 263 29.7
Ciclev10029147m.g Citrus clementina HOM05D003792 ORTHO05D003195 4.1e-08 62.8 216 31.5
Dinv39314 Davidia involucrata HOM05D003792 ORTHO05D003195 4.1e-08 62.8 241 27.0
SalBow6G6536 Salvia bowleyana HOM05D011234 ORTHO05D003195 4.1e-08 62.8 222 31.5
CSS0036112 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 5.3e-08 62.4 209 32.1
Glyma.07G213000 Glycine max HOM05D003792 ORTHO05D003195 5.3e-08 62.4 214 29.4
CiPaw.05G007500 Carya illinoinensis HOM05D003792 ORTHO05D003195 6.9e-08 62.0 188 29.8
Rhsim11G0165200 Rhododendron simsii HOM05D003792 ORTHO05D003195 6.9e-08 62.0 227 29.1
GSVIVG01009490001 Vitis vinifera HOM05D003792 ORTHO05D003195 6.9e-08 62.0 244 30.7
Nitab4.5_0002760g0070 Nicotiana tabacum HOM05D003792 ORTHO05D003195 9.0e-08 61.6 182 33.0
TAR628G0921 Trochodendron aralioides HOM05D003792 ORTHO05D003195 9.0e-08 61.6 257 28.0
CSS0021091 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 1.2e-07 61.2 220 29.5
Prupe.1G435100 Prunus persica HOM05D003792 ORTHO05D003195 1.2e-07 61.2 202 30.2
Rhsim06G0050200 Rhododendron simsii HOM05D003792 ORTHO05D003195 1.2e-07 61.2 206 29.6
Sopen10g021380 Solanum pennellii HOM05D011234 ORTHO05D003195 1.2e-07 61.2 219 30.1
Thecc.08G006700 Theobroma cacao HOM05D003792 ORTHO05D003195 1.2e-07 61.2 233 29.2
Nitab4.5_0000287g0270 Nicotiana tabacum HOM05D003792 ORTHO05D003195 2.0e-07 60.5 183 31.1
Prupe.8G126300 Prunus persica HOM05D003792 ORTHO05D003195 2.0e-07 60.5 80 42.5
Haze_10092 Corylus avellana HOM05D003792 ORTHO05D003195 2.6e-07 60.1 202 29.7
MD15G1082300 Malus domestica HOM05D003792 ORTHO05D003195 2.6e-07 60.1 203 30.0
ECA232G3551 Erigeron canadensis HOM05D003792 ORTHO05D003195 3.4e-07 59.7 228 30.3
Potri.014G029000 Populus trichocarpa HOM05D003792 ORTHO05D003195 3.4e-07 59.7 236 28.4
Cpa.g.sc49.18 Carica papaya HOM05D003792 ORTHO05D003195 4.5e-07 59.3 187 31.0
Phvul.001G022200 Phaseolus vulgaris HOM05D003792 ORTHO05D003195 4.5e-07 59.3 179 27.9
PGR042G0828 Punica granatum HOM05D003792 ORTHO05D003195 4.5e-07 59.3 226 30.5
Gohir.D05G205900 Gossypium hirsutum HOM05D003792 ORTHO05D003195 5.9e-07 58.9 161 32.3
Ah.11g043080 Amaranthus hybridus HOM05D003792 ORTHO05D003195 7.7e-07 58.5 87 41.4
Duzib052G0481 Durio zibethinus HOM05D003792 ORTHO05D003195 7.7e-07 58.5 213 32.9
Duzib116G0066 Durio zibethinus HOM05D003792 ORTHO05D003195 7.7e-07 58.5 225 29.8
CiPaw.16G043500 Carya illinoinensis HOM05D003792 ORTHO05D003195 1.0e-06 58.2 205 31.2
MD05G1081700 Malus domestica HOM05D003792 ORTHO05D003195 1.0e-06 58.2 236 28.8
Nitab4.5_0002543g0100 Nicotiana tabacum HOM05D011234 ORTHO05D003195 1.0e-06 58.2 214 29.4
MSTRG.24332 Avicennia marina HOM05D003792 ORTHO05D003195 1.7e-06 57.4 194 31.4
COL.COLO4_26514 Corchorus olitorius HOM05D003792 ORTHO05D003195 1.7e-06 57.4 227 29.5
Oeu007289.1 Olea europaea HOM05D011234 ORTHO05D003195 1.7e-06 57.4 130 30.8
QL02p004753 Quercus lobata HOM05D003792 ORTHO05D003195 1.7e-06 57.4 241 27.8
Medtr1g019360 Medicago truncatula HOM05D003792 ORTHO05D003195 2.2e-06 57.0 172 29.7
CDE08G1351 Ceratophyllum demersum HOM05D003792 ORTHO05D003195 2.9e-06 56.6 86 38.4
Lj5C209G18 Lonicera japonica HOM05D003792 ORTHO05D003195 3.8e-06 56.2 169 34.3
Oeu012963.1 Olea europaea HOM05D003792 ORTHO05D003195 3.8e-06 56.2 239 28.9
Solyc10g050220.2 Solanum lycopersicum HOM05D011234 ORTHO05D003195 3.8e-06 56.2 216 29.2
PGSC0003DMG402007970 Solanum tuberosum HOM05D003792 ORTHO05D003195 3.8e-06 56.2 223 29.1
Gohir.A05G202700 Gossypium hirsutum HOM05D003792 ORTHO05D003195 5.0e-06 55.8 199 29.1
HanXRQChr09g0267581 Helianthus annuus HOM05D003792 ORTHO05D003195 5.0e-06 55.8 187 29.9
Peaxi162Scf00016g01956 Petunia axillaris HOM05D011234 ORTHO05D003195 5.0e-06 55.8 103 35.0
TPR.G12693 Trifolium pratense HOM05D003792 ORTHO05D003195 5.0e-06 55.8 228 29.4
Eucgr.F00223 Eucalyptus grandis HOM05D003792 ORTHO05D003195 6.5e-06 55.5 193 31.1
THA.LOC104812575 Tarenaya hassleriana HOM05D003792 ORTHO05D003195 6.5e-06 55.5 249 27.7
TPR.G3791 Trifolium pratense HOM05D003792 ORTHO05D003195 6.5e-06 55.5 174 28.7
Gorai.009G212200 Gossypium raimondii HOM05D003792 ORTHO05D003195 8.5e-06 55.1 202 30.2
Nn5g30305 Nelumbo nucifera HOM05D003792 ORTHO05D003195 8.5e-06 55.1 197 29.4


User provided reference genes

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