Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G16340 Aethionema arabicum HOM05D006261 ORTHO05D007979 1.9e-251 872.1 462 100.0
Thhalv10025131m.g Eutrema salsugineum HOM05D006261 ORTHO05D007979 1.1e-217 760.0 465 86.2
Sp7g31680 Schrenkiella parvula HOM05D006261 ORTHO05D007979 1.9e-214 749.2 465 85.2
C01p04840 Brassica napus HOM05D006261 ORTHO05D007979 3.1e-209 731.9 462 84.2
AT4G33945 Arabidopsis thaliana HOM05D006261 ORTHO05D007979 2.0e-208 729.2 465 83.4
BolC1t00468H Brassica oleracea HOM05D006261 ORTHO05D007979 2.6e-208 728.8 460 83.7
AL7G17470 Arabidopsis lyrata HOM05D006261 ORTHO05D007979 5.9e-208 727.6 465 82.8
A01p04450 Brassica napus HOM05D006261 ORTHO05D007979 2.2e-207 725.7 462 83.5
BraA01t00432Z Brassica rapa HOM05D006261 ORTHO05D007979 8.5e-207 723.8 462 83.3
Carub.0007s0647 Capsella rubella HOM05D006261 ORTHO05D007979 5.5e-206 721.1 465 81.9
THA.LOC104807349 Tarenaya hassleriana HOM05D006261 ORTHO05D007979 6.5e-199 697.6 464 78.4
TWI31G0850 Tripterygium wilfordii HOM05D006261 ORTHO05D007979 3.5e-168 595.5 466 67.2
Manes.15G143000 Manihot esculenta HOM05D006261 ORTHO05D007979 5.6e-166 588.2 459 67.8
Gorai.002G007100 Gossypium raimondii HOM05D006261 ORTHO05D007979 4.0e-164 582.0 464 65.5
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum HOM05D006261 ORTHO05D007979 8.9e-164 580.9 463 66.1
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum HOM05D006261 ORTHO05D007979 8.9e-164 580.9 463 66.1
Ciclev10028211m.g Citrus clementina HOM05D006261 ORTHO05D007979 8.9e-164 580.9 463 65.7
Thecc.02G096300 Theobroma cacao HOM05D006261 ORTHO05D007979 2.6e-163 579.3 464 66.4
Cfa005432 Carpinus fangiana HOM05D006261 ORTHO05D007979 4.9e-162 575.1 462 65.2
Potri.004G144100 Populus trichocarpa HOM05D006261 ORTHO05D007979 8.3e-162 574.3 461 65.5
COL.COLO4_11716 Corchorus olitorius HOM05D006261 ORTHO05D007979 1.4e-161 573.5 463 65.2
Potri.009G106100 Populus trichocarpa HOM05D006261 ORTHO05D007979 1.4e-161 573.5 460 65.7
Prupe.8G116700 Prunus persica HOM05D006261 ORTHO05D007979 4.1e-161 572.0 459 63.6
Lalb_Chr10g0095461 Lupinus albus HOM05D006261 ORTHO05D007979 9.2e-161 570.9 465 63.9
CANSAT25G2015 Cannabis sativa HOM05D006261 ORTHO05D007979 4.6e-160 568.5 461 65.1
GSVIVG01031798001 Vitis vinifera HOM05D006261 ORTHO05D007979 7.8e-160 567.8 460 65.7
Gohir.A01G006000 Gossypium hirsutum HOM05D006261 ORTHO05D007979 2.3e-159 566.2 464 64.7
MD10G1089700 Malus domestica HOM05D006261 ORTHO05D007979 3.0e-159 565.8 459 64.1
CsaV3_7G008780 Cucumis sativus L. HOM05D006261 ORTHO05D007979 1.1e-158 563.9 460 63.7
QL11p038259 Quercus lobata HOM05D006261 ORTHO05D007979 1.5e-158 563.5 461 65.1
Eucgr.I01173 Eucalyptus grandis HOM05D006261 ORTHO05D007979 2.5e-158 562.8 462 65.4
Sabra04G0095700 Salix brachista HOM05D006261 ORTHO05D007979 1.6e-157 560.1 470 63.2
TAR381G0774 Trochodendron aralioides HOM05D006261 ORTHO05D007979 4.7e-157 558.5 468 62.0
Nn5g30173 Nelumbo nucifera HOM05D006261 ORTHO05D007979 1.8e-156 556.6 470 62.1
Ca_12470_v3 Cicer arietinum L. HOM05D006261 ORTHO05D007979 2.6e-155 552.7 457 62.8
MELO3C018434.2 Cucumis melo HOM05D006261 ORTHO05D007979 1.3e-154 550.4 460 63.0
Haze_01887 Corylus avellana HOM05D006261 ORTHO05D007979 2.2e-154 549.7 462 63.2
TPR.G11138 Trifolium pratense HOM05D006261 ORTHO05D007979 2.2e-154 549.7 457 62.6
Hund06186 Selenicereus undatus HOM05D006261 ORTHO05D007979 2.9e-154 549.3 456 62.7
Aqoxy6G01433 Aquilegia oxysepala HOM05D006261 ORTHO05D007979 3.7e-154 548.9 459 62.5
Lj2g0017302 Lotus japonicus HOM05D006261 ORTHO05D007979 1.1e-153 547.4 457 62.8
CiPaw.05G054700 Carya illinoinensis HOM05D006261 ORTHO05D007979 1.9e-153 546.6 495 59.4
FAN15G2665 Fragaria x ananassa HOM05D006261 ORTHO05D007979 3.2e-153 545.8 457 62.8
FAN20G2731 Fragaria x ananassa HOM05D006261 ORTHO05D007979 2.0e-152 543.1 457 62.4
RcHm_v2.0_Chr6g0259011 Rosa chinensis HOM05D006261 ORTHO05D007979 2.0e-152 543.1 456 61.4
FAN27G0123 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.7e-151 540.0 457 62.1
Glyma.07G178400 Glycine max HOM05D006261 ORTHO05D007979 1.7e-151 540.0 462 61.9
VMungo1215G1075 Vigna mungo HOM05D006261 ORTHO05D007979 2.3e-151 539.7 463 61.6
Psat6g096640 Pisum sativum HOM05D006261 ORTHO05D007979 3.0e-151 539.3 458 62.7
Medtr1g034000 Medicago truncatula HOM05D006261 ORTHO05D007979 1.5e-150 537.0 458 61.6
Phvul.003G012500 Phaseolus vulgaris HOM05D006261 ORTHO05D007979 4.3e-150 535.4 464 60.8
MBI02_g21208_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 7.3e-150 534.6 483 59.0
PGSC0003DMG400022938 Solanum tuberosum HOM05D006261 ORTHO05D007979 7.3e-150 534.6 462 60.6
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea HOM05D006261 ORTHO05D007979 1.2e-149 533.9 467 61.5
Rhsim05G0080700 Rhododendron simsii HOM05D006261 ORTHO05D007979 2.8e-149 532.7 480 60.6
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea HOM05D006261 ORTHO05D007979 6.2e-149 531.6 467 61.0
PSO541G6069 Papaver somniferum HOM05D006261 ORTHO05D007979 6.2e-149 531.6 466 59.0
Cc02_g18510 Coffea canephora HOM05D006261 ORTHO05D007979 8.1e-149 531.2 464 61.4
SGA_v2.0_scaffold58G20611 Striga asiatica HOM05D006261 ORTHO05D007979 8.1e-149 531.2 461 61.8
Solyc11g044870.2 Solanum lycopersicum HOM05D006261 ORTHO05D007979 8.9e-148 527.7 462 60.2
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 9.8e-147 524.2 495 58.8
Sopen11g020360 Solanum pennellii HOM05D006261 ORTHO05D007979 6.4e-146 521.5 461 59.7
vmacro19482 Vaccinium macrocarpon HOM05D006261 ORTHO05D007979 6.4e-146 521.5 482 58.7
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 1.4e-145 520.4 494 58.7
SalBow6G7179 Salvia bowleyana HOM05D006261 ORTHO05D007979 1.0e-143 514.2 461 59.9
AUR62011430 Chenopodium quinoa HOM05D006261 ORTHO05D007979 2.3e-143 513.1 463 58.7
EL10Ac9g21824 Beta vulgaris HOM05D006261 ORTHO05D007979 6.6e-143 511.5 472 57.4
ClCG02G005750 Citrullus lanatus HOM05D006261 ORTHO05D007979 1.1e-142 510.8 460 59.3
Migut.B00311 Erythranthe guttata HOM05D006261 ORTHO05D007979 1.9e-142 510.0 461 59.0
Lsat_1_v5_gn_7_87821 Lactuca sativa HOM05D006261 ORTHO05D007979 4.3e-142 508.8 462 57.6
Actinidia17850 Actinidia chinensis HOM05D006261 ORTHO05D007979 1.2e-141 507.3 441 61.2
AUR62016631 Chenopodium quinoa HOM05D006261 ORTHO05D007979 1.1e-140 504.2 477 57.4
Gohir.D01G006100 Gossypium hirsutum HOM05D006261 ORTHO05D007979 8.9e-140 501.1 464 58.6
CSS0049642 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 3.4e-139 499.2 465 57.6
Lj9C360T7 Lonicera japonica HOM05D006261 ORTHO05D007979 4.9e-138 495.4 483 56.5
CSS0020679 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 4.1e-137 492.3 460 57.2
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 3.5e-136 489.2 463 57.2
Nitab4.5_0000736g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 1.3e-135 487.3 460 58.0
HanXRQChr16g0508741 Helianthus annuus HOM05D006261 ORTHO05D007979 5.1e-135 485.3 461 56.4
unitig_21.g20756 Utricularia gibba HOM05D006261 ORTHO05D007979 5.1e-135 485.3 459 55.8
Oeu007256.2 Olea europaea HOM05D006261 ORTHO05D007979 6.6e-135 485.0 417 61.6
Sc08g0000100 Simmondsia chinensis HOM05D006261 ORTHO05D007979 5.6e-134 481.9 419 59.4
Zm00001eb255680 Zea mays HOM05D006261 ORTHO05D007979 3.1e-132 476.1 487 53.6
Peaxi162Scf00684g00565 Petunia axillaris HOM05D006261 ORTHO05D007979 8.9e-132 474.6 417 60.9
Ah.01g020100 Amaranthus hybridus HOM05D006261 ORTHO05D007979 4.9e-130 468.8 466 54.9
Sed0027300 Sechium edule HOM05D006261 ORTHO05D007979 6.4e-130 468.4 375 64.5
FAN24G3480 Fragaria x ananassa HOM05D006261 ORTHO05D007979 8.4e-130 468.0 425 60.0
ATR0097G005 Amborella trichopoda HOM05D006261 ORTHO05D007979 2.7e-128 463.0 478 53.6
Cpa.g.sc62.43 Carica papaya HOM05D006261 ORTHO05D007979 9.9e-123 444.5 322 73.0
Os02g0761200 Oryza sativa ssp. japonica HOM05D006261 ORTHO05D007979 1.2e-120 437.6 463 52.7
HPP92_004238 Vanilla planifolia HOM05D006261 ORTHO05D007979 1.5e-118 430.6 467 51.2
HPP92_004260 Vanilla planifolia HOM05D006261 ORTHO05D007979 5.6e-118 428.7 467 51.4
MSTRG.16765 Avicennia marina HOM05D006261 ORTHO05D007979 5.3e-116 422.2 461 51.6
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 2.0e-115 420.2 375 60.0
FvH4_2g06790 Fragaria vesca HOM05D006261 ORTHO05D007979 2.9e-114 416.4 361 60.9
PGR142G4090 Punica granatum HOM05D006261 ORTHO05D007979 7.1e-113 411.8 321 67.6
SEGI_22642 Sequoiadendron giganteum HOM05D006261 ORTHO05D007979 2.7e-112 409.8 477 47.4
BcaB03g11867 Brassica carinata HOM05D006261 ORTHO05D007979 1.5e-107 394.0 267 82.4
Dinv23589 Davidia involucrata HOM05D006261 ORTHO05D007979 8.7e-103 378.3 327 59.9
CARHR242070 Cardamine hirsuta HOM05D006261 ORTHO05D007979 2.8e-101 373.2 220 88.2
CDE10G1007 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 2.4e-100 370.2 506 45.8
SHI05382 Sapria himalayana HOM05D006261 ORTHO05D007979 2.0e-99 367.1 360 55.8
DCAR_000243 Daucus carota HOM05D006261 ORTHO05D007979 1.9e-97 360.5 323 60.4
Nitab4.5_0002141g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 5.5e-97 359.0 324 59.6
CAN.G406.2 Capsicum annuum HOM05D006261 ORTHO05D007979 1.1e-92 344.7 327 56.6
Mapoly0088s0010 Marchantia polymorpha HOM05D006261 ORTHO05D007979 1.1e-81 308.1 483 39.8
CDE10G0955 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 4.7e-80 302.8 341 49.9
Haze_01888 Corylus avellana HOM05D006261 ORTHO05D007979 4.7e-80 302.8 295 57.6
SMO116G0201 Selaginella moellendorffii HOM05D006261 ORTHO05D007979 1.4e-68 264.6 422 40.8
RcHm_v2.0_Chr6g0252951 Rosa chinensis HOM05D006261 ORTHO05D007979 1.0e-58 231.9 363 42.7
Pp3c15_12310 Physcomitrium patens HOM05D006261 ORTHO05D007979 2.1e-56 224.2 487 34.5
MCO13G090 Micromonas commoda HOM05D006261 ORTHO05D007979 3.3e-41 173.7 483 32.5
MBI02_g32602_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 6.2e-40 169.5 158 57.6
Glyma.20G009900 Glycine max HOM05D006261 ORTHO05D007979 7.0e-36 156.0 194 49.0
Cre07.g343850 Chlamydomonas reinhardtii HOM05D006261 ORTHO05D007979 2.1e-27 127.9 495 25.9
BcaB01g01387 Brassica carinata HOM05D006261 ORTHO05D007979 1.0e-26 125.6 81 79.0
BcaB06g27277 Brassica carinata HOM05D006261 ORTHO05D007979 3.9e-26 123.6 82 80.5
BcaB01g01385 Brassica carinata HOM05D006261 ORTHO05D007979 1.9e-25 121.3 81 77.8
MBI15_g16863_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 2.1e-24 117.9 128 55.5
Dinv42128 Davidia involucrata HOM05D006261 ORTHO05D007979 8.9e-23 112.5 377 30.2
PRCOL_00000949 Prasinoderma coloniale HOM05D006261 ORTHO05D007979 4.4e-22 110.2 400 27.8
CAN.G406.3 Capsicum annuum HOM05D006261 ORTHO05D007979 4.9e-21 106.7 141 46.1
DCAR_022063 Daucus carota HOM05D006261 ORTHO05D007979 2.1e-19 101.3 84 61.9
CBR_g53672 Chara braunii HOM05D000019 ORTHO05D000353 2.5e-17 94.4 194 36.1
SHI05383 Sapria himalayana HOM05D006261 ORTHO05D007979 9.6e-17 92.4 100 52.0
CAN.G93.11 Capsicum annuum HOM05D006261 ORTHO05D007979 7.1e-12 76.3 100 47.0
Lj1g0009361 Lotus japonicus HOM05D041574 ORTHO05D236155 2.0e-06 58.2 72 40.3
SEGI_04453 Sequoiadendron giganteum HOM05D006261 ORTHO05D386652 2.0e-06 58.2 40 70.0


User provided reference genes

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