Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G16170 Aethionema arabicum HOM05D004348 ORTHO05D006191 1.7e-129 466.1 251 100.0
Sp7g32110 Schrenkiella parvula HOM05D004348 ORTHO05D006191 2.8e-95 352.4 249 78.7
AL7G16960 Arabidopsis lyrata HOM05D004348 ORTHO05D006191 1.5e-93 346.7 249 80.3
Thhalv10024246m.g Eutrema salsugineum HOM05D004348 ORTHO05D006191 2.0e-93 346.3 246 79.3
BolC1t00433H Brassica oleracea HOM05D004348 ORTHO05D006191 4.3e-80 302.0 247 72.1
C01p04470 Brassica napus HOM05D004348 ORTHO05D006191 1.6e-79 300.1 247 71.7
A01p04110 Brassica napus HOM05D004348 ORTHO05D006191 3.1e-78 295.8 247 71.7
BraA01t00399Z Brassica rapa HOM05D004348 ORTHO05D006191 4.0e-78 295.4 247 71.3
THA.LOC104806947 Tarenaya hassleriana HOM05D004348 ORTHO05D006191 2.8e-71 272.7 259 66.4
Cpa.g.c24415.13 Carica papaya HOM05D004348 ORTHO05D006191 2.3e-57 226.5 245 55.9
COL.COLO4_26463 Corchorus olitorius HOM05D004348 ORTHO05D006191 3.3e-56 222.6 248 55.2
Haze_17559 Corylus avellana HOM05D004348 ORTHO05D006191 9.7e-56 221.1 255 58.0
MELO3C016737.2 Cucumis melo HOM05D004348 ORTHO05D006191 2.8e-55 219.5 247 57.1
CiPaw.16G046500 Carya illinoinensis HOM05D004348 ORTHO05D006191 4.8e-55 218.8 234 55.1
ClCG05G019730 Citrullus lanatus HOM05D004348 ORTHO05D006191 1.1e-54 217.6 252 55.2
Cfa018516 Carpinus fangiana HOM05D004348 ORTHO05D006191 4.5e-53 212.2 251 55.8
Manes.05G171200 Manihot esculenta HOM05D004348 ORTHO05D006191 4.5e-53 212.2 236 58.1
Thecc.08G012500 Theobroma cacao HOM05D004348 ORTHO05D006191 4.5e-53 212.2 250 55.2
QL02p005708 Quercus lobata HOM05D004348 ORTHO05D006191 1.3e-52 210.7 185 62.2
Gorai.002G131100 Gossypium raimondii HOM05D004348 ORTHO05D006191 1.7e-52 210.3 249 55.8
Sabra14G0024200 Salix brachista HOM05D004348 ORTHO05D006191 2.9e-52 209.5 241 55.6
Atru.chr13.637 Acer truncatum HOM05D004348 ORTHO05D006191 6.5e-52 208.4 257 50.6
Potri.014G034100 Populus trichocarpa HOM05D004348 ORTHO05D006191 1.1e-51 207.6 232 57.3
Prupe.1G440200 Prunus persica HOM05D004348 ORTHO05D006191 1.4e-51 207.2 247 55.5
Gohir.D01G106800 Gossypium hirsutum HOM05D004348 ORTHO05D006191 3.2e-51 206.1 249 55.0
vmacro21553 Vaccinium macrocarpon HOM05D004348 ORTHO05D006191 5.5e-51 205.3 257 54.1
Nn5g30212 Nelumbo nucifera HOM05D004348 ORTHO05D006191 1.6e-50 203.8 253 54.2
MD15G1086600 Malus domestica HOM05D004348 ORTHO05D006191 2.7e-50 203.0 241 54.4
Lj4A53T53 Lonicera japonica HOM05D004348 ORTHO05D006191 4.7e-50 202.2 260 51.5
Dinv39334 Davidia involucrata HOM05D004348 ORTHO05D006191 1.4e-49 200.7 255 51.4
Duzib093G0393 Durio zibethinus HOM05D004348 ORTHO05D006191 1.8e-49 200.3 258 53.9
FvH4_2g34840 Fragaria vesca HOM05D004348 ORTHO05D006191 2.3e-49 199.9 235 53.6
PGR031G2748 Punica granatum HOM05D004348 ORTHO05D006191 2.3e-49 199.9 251 55.0
RcHm_v2.0_Chr6g0307221 Rosa chinensis HOM05D004348 ORTHO05D006191 3.0e-49 199.5 232 53.9
TAR625G1112 Trochodendron aralioides HOM05D004348 ORTHO05D006191 3.0e-49 199.5 251 50.6
Hma1.2p1_0337F.1_g129300 Hydrangea macrophylla HOM05D004348 ORTHO05D006191 5.1e-49 198.7 261 51.3
Lalb_Chr24g0399211 Lupinus albus HOM05D004348 ORTHO05D006191 8.8e-49 198.0 209 56.5
Atru.chr1.1668 Acer truncatum HOM05D004348 ORTHO05D006191 1.1e-48 197.6 236 52.1
GSVIVG01009553001 Vitis vinifera HOM05D004348 ORTHO05D006191 4.4e-48 195.7 253 50.6
CSS0012651 Camellia sinensis var. sinensis HOM05D004348 ORTHO05D006191 5.7e-48 195.3 254 52.0
FAN27G3414 Fragaria x ananassa HOM05D004348 ORTHO05D006191 5.7e-48 195.3 240 52.1
arahy.Tifrunner.gnm1.ann1.2EEB7P Arachis hypogaea HOM05D004348 ORTHO05D006191 1.7e-47 193.7 179 60.3
arahy.Tifrunner.gnm1.ann1.3D95JG Arachis hypogaea HOM05D004348 ORTHO05D006191 1.7e-47 193.7 179 60.3
FAN15G1136 Fragaria x ananassa HOM05D004348 ORTHO05D006191 2.8e-47 193.0 235 52.3
MD08G1105600 Malus domestica HOM05D004348 ORTHO05D006191 4.8e-47 192.2 195 56.9
Ca_13305_v3 Cicer arietinum L. HOM05D004348 ORTHO05D006191 6.3e-47 191.8 241 50.2
Phvul.001G020000 Phaseolus vulgaris HOM05D004348 ORTHO05D006191 6.3e-47 191.8 249 51.4
Medtr1g019960 Medicago truncatula HOM05D004348 ORTHO05D006191 8.2e-47 191.4 255 49.8
TPR.G13698 Trifolium pratense HOM05D004348 ORTHO05D006191 2.4e-46 189.9 154 65.6
CANSAT78G0057 Cannabis sativa HOM05D004348 ORTHO05D006191 1.0e-44 184.5 194 58.2
Psat6g012000 Pisum sativum HOM05D004348 ORTHO05D006191 1.0e-44 184.5 233 50.2
Glyma.17G244300 Glycine max HOM05D004348 ORTHO05D006191 2.9e-44 183.0 244 50.4
Sc02g0006980 Simmondsia chinensis HOM05D004348 ORTHO05D006191 2.9e-44 183.0 186 56.5
HPP92_019297 Vanilla planifolia HOM05D004348 ORTHO05D006191 6.5e-44 181.8 246 50.8
Cc10_g04460 Coffea canephora HOM05D004348 ORTHO05D006191 1.1e-43 181.0 258 49.2
PSO675G6987 Papaver somniferum HOM05D004348 ORTHO05D006191 1.5e-43 180.6 251 49.0
Lsat_1_v5_gn_1_20621 Lactuca sativa HOM05D004348 ORTHO05D006191 4.2e-43 179.1 253 47.0
Lj5g0025546 Lotus japonicus HOM05D004348 ORTHO05D006191 5.5e-43 178.7 247 49.8
Oeu003300.1 Olea europaea HOM05D004348 ORTHO05D006191 2.7e-42 176.4 234 48.7
Lsat_1_v5_gn_8_33681 Lactuca sativa HOM05D004348 ORTHO05D006191 3.6e-42 176.0 143 62.9
SHI08301 Sapria himalayana HOM05D004348 ORTHO05D006191 4.7e-42 175.6 255 48.2
MBI06_g27707_MAGBIO Magnolia biondii HOM05D004348 ORTHO05D006191 1.0e-41 174.5 244 48.4
Nitab4.5_0000068g0550 Nicotiana tabacum HOM05D004348 ORTHO05D006191 5.2e-41 172.2 247 47.0
Oeu057258.1 Olea europaea HOM05D004348 ORTHO05D006191 5.2e-41 172.2 247 47.4
Sed0012719 Sechium edule HOM05D004348 ORTHO05D006191 5.2e-41 172.2 232 52.2
CDE10G0919 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 5.7e-40 168.7 181 52.5
Nitab4.5_0005301g0040 Nicotiana tabacum HOM05D004348 ORTHO05D006191 1.7e-39 167.2 247 46.6
Aqoxy5G01277 Aquilegia oxysepala HOM05D004348 ORTHO05D006191 2.2e-39 166.8 266 46.6
Solyc04g079280.4 Solanum lycopersicum HOM05D004348 ORTHO05D006191 1.4e-38 164.1 247 46.6
DCAR_020931 Daucus carota HOM05D004348 ORTHO05D006191 3.1e-38 162.9 192 52.6
Sopen04g032870 Solanum pennellii HOM05D004348 ORTHO05D006191 4.1e-38 162.5 247 46.2
EL10Ac1g01783 Beta vulgaris HOM05D004348 ORTHO05D006191 7.0e-38 161.8 167 55.1
HanXRQChr02g0038751 Helianthus annuus HOM05D004348 ORTHO05D006191 7.0e-38 161.8 242 45.0
PGSC0003DMG400007988 Solanum tuberosum HOM05D004348 ORTHO05D006191 9.1e-38 161.4 248 45.6
CDE10G0798 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 2.0e-37 160.2 246 45.1
AUR62022445 Chenopodium quinoa HOM05D004348 ORTHO05D006191 5.0e-36 155.6 121 68.6
AUR62039313 Chenopodium quinoa HOM05D004348 ORTHO05D006191 5.0e-36 155.6 121 68.6
ECA247G1923 Erigeron canadensis HOM05D004348 ORTHO05D006191 1.1e-35 154.5 198 49.0
HanXRQChr16g0507461 Helianthus annuus HOM05D004348 ORTHO05D006191 1.5e-35 154.1 211 47.9
Lsat_1_v5_gn_9_98160 Lactuca sativa HOM05D004348 ORTHO05D005602 1.5e-35 154.1 122 65.6
unitig_26.g10059 Utricularia gibba HOM05D004348 ORTHO05D006191 3.2e-35 152.9 251 45.8
Lsat_1_v5_gn_4_124060 Lactuca sativa HOM05D004348 ORTHO05D006191 6.1e-34 148.7 135 57.8
Actinidia15256 Actinidia chinensis HOM05D004348 ORTHO05D006191 1.8e-33 147.1 106 70.8
VMungo0647G0261 Vigna mungo HOM05D004348 ORTHO05D006191 3.0e-33 146.4 237 45.6
Zm00001eb006390 Zea mays HOM05D004348 ORTHO05D006191 4.0e-33 146.0 219 47.0
Hund26625 Selenicereus undatus HOM05D004348 ORTHO05D006191 6.8e-33 145.2 246 46.3
Eucgr.F02367 Eucalyptus grandis HOM05D004348 ORTHO05D006191 4.4e-32 142.5 252 45.2
Rhsim06G0047100 Rhododendron simsii HOM05D004348 ORTHO05D006191 1.4e-30 137.5 197 47.2
SGA_v2.0_scaffold226G43137 Striga asiatica HOM05D004348 ORTHO05D006191 4.1e-30 136.0 182 47.3
Peaxi162Scf00528g00825 Petunia axillaris HOM05D004348 ORTHO05D006191 7.0e-30 135.2 238 45.4
ATR1159G040 Amborella trichopoda HOM05D004348 ORTHO05D006191 1.2e-29 134.4 229 46.3
SEGI_30856 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 3.0e-25 119.8 191 40.3
SEGI_03645 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 4.0e-25 119.4 189 40.7
Atru.chr1.1667 Acer truncatum HOM05D004348 ORTHO05D006191 1.8e-22 110.5 100 62.0
CAN.G371.43 Capsicum annuum HOM05D004348 ORTHO05D006191 3.8e-20 102.8 183 43.7
ECA232G4920 Erigeron canadensis HOM05D004348 ORTHO05D006191 8.6e-20 101.7 241 35.7
SMO144G0009 Selaginella moellendorffii HOM05D004348 ORTHO05D006191 3.4e-16 89.7 123 45.5
GSVIVG01009550001 Vitis vinifera HOM05D004348 ORTHO05D006191 1.3e-12 77.8 65 58.5
Migut.N02696 Erythranthe guttata HOM05D004348 ORTHO05D006191 1.7e-12 77.4 160 39.4
Mapoly0033s0109 Marchantia polymorpha HOM05D004348 ORTHO05D006191 1.2e-10 71.2 142 38.0
AagrBONN_evm.TU.Sc2ySwM_344.1636 Anthoceros agrestis HOM05D004348 ORTHO05D006191 6.2e-10 68.9 217 32.3
CBR_g45541 Chara braunii HOM05D004348 ORTHO05D006191 2.0e-08 63.9 96 42.7
Mapoly0017s0011 Marchantia polymorpha HOM05D004348 ORTHO05D006191 7.0e-06 55.5 127 37.0


User provided reference genes

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