Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 1.8e-114 416.0 220 100.0
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 2.5e-92 342.4 220 82.7
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 7.4e-92 340.9 220 84.1
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 4.8e-91 338.2 220 82.7
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 4.0e-90 335.1 220 81.8
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 3.4e-89 332.0 220 81.8
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 1.7e-88 329.7 220 82.3
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 6.4e-88 327.8 221 81.4
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 4.6e-86 321.6 218 80.7
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 1.0e-85 320.5 219 79.5
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 1.0e-85 320.5 221 79.6
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 1.3e-85 320.1 221 79.6
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 2.3e-85 319.3 217 79.7
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 1.1e-84 317.0 219 79.0
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 4.3e-84 315.1 219 77.6
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 4.3e-84 315.1 219 77.6
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 1.3e-83 313.5 218 78.9
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 1.6e-75 286.6 217 75.6
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 4.1e-74 282.0 222 73.4
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 2.5e-71 272.7 211 71.6
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 3.6e-70 268.9 223 69.1
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 4.6e-70 268.5 211 70.1
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 7.9e-70 267.7 210 69.0
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 7.9e-70 267.7 211 70.1
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 6.7e-69 264.6 218 70.2
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 1.1e-68 263.8 222 68.0
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 2.5e-68 262.7 175 78.3
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 3.3e-68 262.3 216 69.0
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 9.7e-68 260.8 219 67.1
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 1.6e-67 260.0 198 73.2
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 1.6e-67 260.0 220 67.7
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 2.2e-67 259.6 209 69.4
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 2.8e-67 259.2 170 81.2
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.1e-66 257.3 216 67.1
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 1.1e-66 257.3 180 75.6
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 1.1e-66 257.3 210 68.1
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 3.1e-66 255.8 216 66.7
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 6.9e-66 254.6 206 69.4
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 1.2e-65 253.8 180 74.4
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 2.6e-65 252.7 216 66.7
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 4.5e-65 251.9 224 63.8
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 2.9e-64 249.2 167 79.0
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 1.1e-63 247.3 193 72.5
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 1.4e-63 246.9 204 69.6
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 4.2e-63 245.4 219 65.3
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 1.2e-62 243.8 175 76.6
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 4.6e-62 241.9 167 76.6
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 4.6e-62 241.9 226 64.2
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 1.8e-61 240.0 219 65.3
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 1.8e-61 240.0 181 76.2
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 1.8e-61 240.0 183 72.7
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 2.3e-61 239.6 190 72.1
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 3.0e-61 239.2 173 76.3
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 3.9e-61 238.8 183 73.2
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 5.1e-61 238.4 176 75.0
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 6.7e-61 238.0 204 67.6
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 6.7e-61 238.0 176 75.6
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 8.8e-61 237.7 224 62.5
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 2.6e-60 236.1 174 73.6
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 3.3e-60 235.7 222 62.2
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 4.4e-60 235.3 159 79.2
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 9.7e-60 234.2 186 69.4
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 1.3e-59 233.8 174 75.3
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 4.8e-59 231.9 180 69.4
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 8.2e-59 231.1 172 72.7
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 8.2e-59 231.1 168 73.8
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 1.8e-58 229.9 185 70.3
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 2.4e-58 229.6 189 67.7
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 3.1e-58 229.2 198 66.7
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 3.1e-58 229.2 173 74.6
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 4.1e-58 228.8 211 63.5
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 5.3e-58 228.4 168 73.2
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 1.2e-57 227.3 179 69.3
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 1.5e-57 226.9 173 71.7
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 1.5e-57 226.9 173 68.8
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 3.4e-57 225.7 173 74.0
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 5.9e-57 224.9 183 69.4
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 7.7e-57 224.6 174 72.4
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 7.7e-57 224.6 177 72.9
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 1.0e-56 224.2 209 64.6
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 1.0e-56 224.2 186 68.3
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 1.3e-56 223.8 224 62.1
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 1.3e-56 223.8 207 64.3
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 1.7e-56 223.4 172 72.1
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 1.7e-56 223.4 204 65.7
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 8.5e-56 221.1 173 72.8
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 1.4e-55 220.3 250 55.2
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 7.9e-54 214.5 184 65.8
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 1.0e-53 214.2 197 61.4
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 3.0e-53 212.6 144 79.9
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 8.8e-53 211.1 124 88.7
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 4.4e-52 208.8 180 66.1
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 6.3e-51 204.9 235 54.9
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 1.4e-50 203.8 149 77.2
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 1.8e-50 203.4 162 69.1
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 7.0e-50 201.4 187 61.0
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 2.0e-49 199.9 149 74.5
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 5.9e-49 198.4 124 83.1
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 5.9e-49 198.4 124 83.1
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 1.7e-48 196.8 167 62.3
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 5.0e-48 195.3 137 74.5
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 6.1e-46 188.3 159 69.8
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 8.0e-46 188.0 187 59.9
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 2.6e-44 183.0 165 57.6
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 4.4e-44 182.2 163 61.3
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 5.7e-44 181.8 178 57.3
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 2.8e-43 179.5 265 47.2
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 3.7e-43 179.1 148 66.9
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 7.2e-39 164.9 154 57.1
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 4.2e-31 139.0 108 68.5
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 9.5e-31 137.9 174 45.4
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 1.8e-29 133.7 167 50.3
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 2.8e-27 126.3 98 67.3
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 6.3e-27 125.2 98 65.3
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 1.8e-26 123.6 123 60.2
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 7.0e-26 121.7 161 46.0
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 3.6e-22 109.4 71 83.1
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 3.0e-21 106.3 90 64.4
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 4.0e-21 105.9 147 39.5
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 7.5e-20 101.7 74 75.7
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 2.3e-16 90.1 147 40.8


User provided reference genes

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