Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G15710 Aethionema arabicum HOM05D005996 ORTHO05D007507 0.0e+00 1557.3 1117 100.0
AT4G34830 Arabidopsis thaliana HOM05D005996 ORTHO05D007507 0.0e+00 1087.0 1119 77.6
AL7G16380 Arabidopsis lyrata HOM05D005996 ORTHO05D007507 0.0e+00 1085.9 1120 77.8
Thhalv10024275m.g Eutrema salsugineum HOM05D005996 ORTHO05D007507 7.6e-312 1073.5 1118 81.6
Sp7g32590 Schrenkiella parvula HOM05D005996 ORTHO05D007507 1.6e-307 1059.7 1118 77.0
BolC1t00389H Brassica oleracea HOM05D005996 ORTHO05D007507 1.8e-295 1019.6 1157 76.6
C01p03970 Brassica napus HOM05D005996 ORTHO05D007507 1.6e-291 1006.5 1173 75.4
BraA01t00353Z Brassica rapa HOM05D005996 ORTHO05D007507 4.6e-291 1005.0 1169 75.0
A01p03690 Brassica napus HOM05D005996 ORTHO05D007507 2.6e-286 989.2 1170 75.0
BcaNung00650 Brassica carinata HOM05D005996 ORTHO05D007507 1.7e-285 986.5 1124 72.7
Carub.0007s0547 Capsella rubella HOM05D005996 ORTHO05D007507 3.9e-258 895.6 969 82.2
THA.LOC104807280 Tarenaya hassleriana HOM05D005996 ORTHO05D007507 9.1e-239 831.2 1118 70.1
CARHR243120 Cardamine hirsuta HOM05D005996 ORTHO05D007507 3.2e-191 673.3 683 73.9
Thecc.02G069400 Theobroma cacao HOM05D005996 ORTHO05D007507 5.7e-148 529.6 1080 56.6
Gohir.D13G094700 Gossypium hirsutum HOM05D005996 ORTHO05D007507 1.4e-146 525.0 1116 58.8
Duzib052G0584 Durio zibethinus HOM05D005996 ORTHO05D007507 4.5e-145 520.0 1119 55.5
Gohir.A13G098800 Gossypium hirsutum HOM05D005996 ORTHO05D007507 1.0e-144 518.8 1116 58.3
Gorai.001G246900 Gossypium raimondii HOM05D005996 ORTHO05D007507 2.9e-144 517.3 1116 58.6
Duzib248G0011 Durio zibethinus HOM05D005996 ORTHO05D007507 1.4e-135 488.4 1117 55.9
Potri.004G166600 Populus trichocarpa HOM05D005996 ORTHO05D007507 3.0e-133 480.7 1107 53.6
Nn5g29328 Nelumbo nucifera HOM05D005996 ORTHO05D007507 3.9e-133 480.3 1106 58.0
TWI75G0427 Tripterygium wilfordii HOM05D005996 ORTHO05D007507 6.7e-133 479.6 1113 51.8
QL11p046997 Quercus lobata HOM05D005996 ORTHO05D007507 3.3e-132 477.2 1146 52.5
Cpa.g.sc37.207 Carica papaya HOM05D005996 ORTHO05D007507 4.4e-132 476.9 1124 48.6
Manes.11G088413 Manihot esculenta HOM05D005996 ORTHO05D007507 4.1e-130 470.3 1097 49.0
Dinv04976 Davidia involucrata HOM05D005996 ORTHO05D007507 5.9e-129 466.5 1129 48.5
Cfa005165 Carpinus fangiana HOM05D005996 ORTHO05D007507 7.7e-129 466.1 1113 53.5
Manes.11G088257 Manihot esculenta HOM05D005996 ORTHO05D007507 5.0e-128 463.4 1104 48.6
Cc02_g16690 Coffea canephora HOM05D005996 ORTHO05D007507 2.7e-126 457.6 1122 46.9
COL.COLO4_17237 Corchorus olitorius HOM05D005996 ORTHO05D007507 2.7e-126 457.6 1033 59.1
CANSAT25G2790 Cannabis sativa HOM05D005996 ORTHO05D007507 8.0e-126 456.1 1127 55.3
CiPaw.06G125900 Carya illinoinensis HOM05D005996 ORTHO05D007507 9.7e-124 449.1 1147 45.2
GSVIVG01024119001 Vitis vinifera HOM05D005996 ORTHO05D007507 9.7e-124 449.1 1067 51.5
Sabra04G0111800 Salix brachista HOM05D005996 ORTHO05D007507 2.8e-123 447.6 1123 41.9
PSO170G2255 Papaver somniferum HOM05D005996 ORTHO05D007507 7.7e-121 439.5 1160 55.3
Haze_02211 Corylus avellana HOM05D005996 ORTHO05D007507 6.5e-120 436.4 1181 49.3
PSO700G0013 Papaver somniferum HOM05D005996 ORTHO05D007507 7.2e-119 433.0 1177 54.7
BcaNung04307 Brassica carinata HOM05D005996 ORTHO05D007507 3.6e-118 430.6 258 83.7
Aqoxy5G01766 Aquilegia oxysepala HOM05D005996 ORTHO05D007507 8.0e-118 429.5 1137 55.7
PGR142G2892 Punica granatum HOM05D005996 ORTHO05D007507 1.2e-116 425.6 1126 54.4
CsaV3_2G015630 Cucumis sativus L. HOM05D005996 ORTHO05D007507 1.7e-115 421.8 1126 49.6
FAN24G2882 Fragaria x ananassa HOM05D005996 ORTHO05D007507 3.7e-115 420.6 1100 50.7
FvH4_2g02240 Fragaria vesca HOM05D005996 ORTHO05D007507 6.3e-115 419.9 1100 49.7
VMungo1127G0707 Vigna mungo HOM05D005996 ORTHO05D007507 8.3e-115 419.5 1142 50.3
Ciclev10027915m.g Citrus clementina HOM05D005996 ORTHO05D007507 3.1e-114 417.5 712 73.7
Prupe.8G158300 Prunus persica HOM05D005996 ORTHO05D007507 5.4e-114 416.8 1129 52.5
Sc08g0001200 Simmondsia chinensis HOM05D005996 ORTHO05D007507 5.4e-114 416.8 1120 53.6
FAN15G0761 Fragaria x ananassa HOM05D005996 ORTHO05D007507 9.1e-114 416.0 1108 53.3
Atru.chr5.3202 Acer truncatum HOM05D005996 ORTHO05D007507 1.2e-113 415.6 1151 53.5
FAN27G2880 Fragaria x ananassa HOM05D005996 ORTHO05D007507 2.0e-113 414.8 1100 55.1
RcHm_v2.0_Chr6g0245931 Rosa chinensis HOM05D005996 ORTHO05D007507 2.0e-113 414.8 1106 51.4
Dinv41983 Davidia involucrata HOM05D005996 ORTHO05D007507 4.5e-113 413.7 1058 53.2
Glyma.12G033700 Glycine max HOM05D005996 ORTHO05D007507 1.0e-112 412.5 1138 50.4
Phvul.011G036300 Phaseolus vulgaris HOM05D005996 ORTHO05D007507 1.3e-112 412.1 1128 53.5
FAN20G0865 Fragaria x ananassa HOM05D005996 ORTHO05D007507 1.7e-112 411.8 1108 53.3
MD05G1113900 Malus domestica HOM05D005996 ORTHO05D007507 2.2e-112 411.4 1131 49.0
Rhsim05G0064300 Rhododendron simsii HOM05D005996 ORTHO05D007507 2.9e-112 411.0 1199 43.9
Actinidia32089 Actinidia chinensis HOM05D005996 ORTHO05D007507 6.5e-112 409.8 1136 48.9
MSTRG.16865 Avicennia marina HOM05D005996 ORTHO05D007507 2.5e-111 407.9 1123 51.6
Sed0010933 Sechium edule HOM05D005996 ORTHO05D007507 4.2e-111 407.1 1124 51.2
Eucgr.I01366 Eucalyptus grandis HOM05D005996 ORTHO05D007507 5.5e-111 406.8 1126 44.6
Lj3g0021328 Lotus japonicus HOM05D005996 ORTHO05D007507 1.6e-110 405.2 1120 54.5
DCAR_022928 Daucus carota HOM05D005996 ORTHO05D007507 3.6e-110 404.1 1138 47.4
ClCG11G003680 Citrullus lanatus HOM05D005996 ORTHO05D007507 8.0e-110 402.9 1101 49.6
vmacro17393 Vaccinium macrocarpon HOM05D005996 ORTHO05D007507 1.0e-109 402.5 1183 43.3
Oeu046116.1 Olea europaea HOM05D005996 ORTHO05D007507 1.5e-108 398.7 1127 45.6
Medtr4g072990 Medicago truncatula HOM05D005996 ORTHO05D007507 1.4e-106 392.1 1130 53.6
Glyma.09G218800 Glycine max HOM05D005996 ORTHO05D007507 1.2e-105 389.0 1151 49.3
TPR.G39263 Trifolium pratense HOM05D005996 ORTHO05D007507 4.5e-105 387.1 1129 53.6
Nitab4.5_0000283g0180 Nicotiana tabacum HOM05D005996 ORTHO05D007507 6.6e-104 383.3 1089 48.7
Hund06298 Selenicereus undatus HOM05D005996 ORTHO05D007507 9.5e-103 379.4 1020 49.8
Migut.B00160 Erythranthe guttata HOM05D005996 ORTHO05D007507 2.1e-102 378.3 1147 49.4
EL10Ac9g22244 Beta vulgaris HOM05D005996 ORTHO05D007507 2.8e-102 377.9 693 63.9
Psat7g180560 Pisum sativum HOM05D005996 ORTHO05D007507 1.4e-101 375.6 1097 53.9
ATR0955G004 Amborella trichopoda HOM05D005996 ORTHO05D007507 8.3e-99 366.3 737 69.7
Ah.01g018430 Amaranthus hybridus HOM05D005996 ORTHO05D007507 1.1e-98 365.9 829 51.4
Lalb_Chr01g0001941 Lupinus albus HOM05D005996 ORTHO05D007507 1.1e-98 365.9 863 61.5
Sopen01g053080 Solanum pennellii HOM05D005996 ORTHO05D007507 4.1e-98 364.0 830 63.9
Solyc01g111020.3 Solanum lycopersicum HOM05D005996 ORTHO05D007507 5.4e-98 363.6 686 73.2
Lj5C186G10 Lonicera japonica HOM05D005996 ORTHO05D007507 1.6e-97 362.1 1114 52.6
Lsat_1_v5_gn_4_74240 Lactuca sativa HOM05D005996 ORTHO05D007507 2.0e-97 361.7 1064 50.1
HanXRQChr10g0296321 Helianthus annuus HOM05D005996 ORTHO05D007507 3.9e-96 357.5 1152 51.3
MELO3C020773.2 Cucumis melo HOM05D005996 ORTHO05D007507 7.3e-95 353.2 1126 47.5
arahy.Tifrunner.gnm1.ann1.YQYF3H Arachis hypogaea HOM05D005996 ORTHO05D007507 2.1e-94 351.7 1179 46.6
ECA234G3379 Erigeron canadensis HOM05D005996 ORTHO05D007507 3.6e-94 350.9 1096 47.8
Peaxi162Scf00362g01048 Petunia axillaris HOM05D005996 ORTHO05D007507 8.0e-94 349.7 1129 48.5
CAN.G588.14 Capsicum annuum HOM05D005996 ORTHO05D007507 1.0e-93 349.4 1120 48.7
arahy.Tifrunner.gnm1.ann1.XDQA6W Arachis hypogaea HOM05D005996 ORTHO05D007507 5.2e-93 347.1 1180 46.3
HPP92_022112 Vanilla planifolia HOM05D005996 ORTHO05D007507 2.6e-92 344.7 728 59.3
Sed0023130 Sechium edule HOM05D005996 ORTHO05D007507 1.9e-90 338.6 1055 43.3
CSS0029020 Camellia sinensis var. sinensis HOM05D005996 ORTHO05D007507 2.3e-88 331.6 273 60.4
Nitab4.5_0000980g0320 Nicotiana tabacum HOM05D005996 ORTHO05D007507 1.6e-86 325.5 1112 45.8
SGA_v2.0_scaffold58G20447 Striga asiatica HOM05D005996 ORTHO05D007507 2.1e-86 325.1 1175 42.2
Os10g0181200 Oryza sativa ssp. japonica HOM05D005996 ORTHO05D007507 1.1e-85 322.8 698 58.6
Ca_19076_v3 Cicer arietinum L. HOM05D005996 ORTHO05D007507 3.5e-81 307.8 960 40.2
AUR62010338 Chenopodium quinoa HOM05D005996 ORTHO05D007507 4.3e-79 300.8 900 49.3
MBI09_g26149_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 3.5e-73 281.2 1041 52.6
TAR628G0048 Trochodendron aralioides HOM05D005996 ORTHO05D007507 1.7e-64 252.3 695 49.2
TAR628G0092 Trochodendron aralioides HOM05D005996 ORTHO05D007507 6.4e-51 207.2 164 60.4
AUR62016883 Chenopodium quinoa HOM05D005996 ORTHO05D007507 6.2e-46 190.7 707 50.2
AagrBONN_evm.TU.Sc2ySwM_228.2051 Anthoceros agrestis HOM05D005996 ORTHO05D007507 1.8e-40 172.6 688 61.0
TWI75G0933 Tripterygium wilfordii HOM05D005996 ORTHO05D007507 8.2e-38 163.7 239 44.8
SMO340G0075 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 1.4e-37 162.9 705 50.5
PGSC0003DMG400001599 Solanum tuberosum HOM05D005996 ORTHO05D007507 2.5e-34 152.1 249 79.9
ATR0913G001 Amborella trichopoda HOM05D005996 ORTHO05D007507 2.3e-32 145.6 301 68.8
Nitab4.5_0000980g0280 Nicotiana tabacum HOM05D005996 ORTHO05D007507 3.0e-32 145.2 123 56.9
Pp3c10_19570 Physcomitrium patens HOM05D005996 ORTHO05D007507 3.0e-32 145.2 286 33.2
Mapoly0039s0078 Marchantia polymorpha HOM05D005996 ORTHO05D007507 3.9e-32 144.8 692 60.5
Pp3c12_14320 Physcomitrium patens HOM05D005996 ORTHO05D007507 6.7e-32 144.1 239 36.0
Zm00001eb027100 Zea mays HOM05D005996 ORTHO05D007507 4.8e-30 137.9 260 66.9
CDE09G0259 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 2.4e-29 135.6 162 46.9
Hma1.2p1_0032F.1_g019730 Hydrangea macrophylla HOM05D005996 ORTHO05D007507 5.9e-28 131.0 220 86.4
Mapoly0039s0079 Marchantia polymorpha HOM05D005996 ORTHO05D007507 7.7e-28 130.6 1082 45.3
Pp3c7_22430 Physcomitrium patens HOM05D005996 ORTHO05D007507 3.2e-26 125.2 653 57.7
MBI09_g44523_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 3.6e-25 121.7 109 56.9
CDE09G0530 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 1.4e-24 119.8 240 75.8
CDE09G0218 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 1.8e-24 119.4 143 47.6
CBR_g66762 Chara braunii HOM05D005996 ORTHO05D007507 4.1e-21 108.2 287 27.2
SMO240G0032 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 3.2e-18 98.6 94 46.8
SEGI_22573 Sequoiadendron giganteum HOM05D005996 ORTHO05D007507 9.4e-18 97.1 109 46.8
ATR0074G001 Amborella trichopoda HOM05D005996 ORTHO05D007507 1.0e-16 93.6 107 45.8
MCO09G858 Micromonas commoda HOM05D005996 ORTHO05D007507 1.0e-11 77.0 249 27.7
CDE09G0717 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 6.3e-06 57.8 62 80.6


User provided reference genes

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