Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G14540 Aethionema arabicum HOM05D006592 ORTHO05D008122 0.0e+00 1112.4 550 100.0
Thhalv10007328m.g Eutrema salsugineum HOM05D006592 ORTHO05D008122 8.2e-249 863.6 555 79.3
Sp1g27210 Schrenkiella parvula HOM05D006592 ORTHO05D008122 3.3e-242 841.6 554 78.0
Carub.0001s2983 Capsella rubella HOM05D006592 ORTHO05D008122 1.5e-231 806.2 546 77.1
AL1G49640 Arabidopsis lyrata HOM05D006592 ORTHO05D008122 1.2e-228 796.6 548 76.8
AT1G31410 Arabidopsis thaliana HOM05D006592 ORTHO05D008122 6.1e-228 794.3 553 75.6
BcaB03g13796 Brassica carinata HOM05D006592 ORTHO05D008122 2.8e-225 785.4 551 73.1
A07p09410 Brassica napus HOM05D006592 ORTHO05D008122 5.3e-224 781.2 554 73.1
BolC7t41947H Brassica oleracea HOM05D006592 ORTHO05D008122 1.2e-223 780.0 556 72.8
BraA07t28736Z Brassica rapa HOM05D006592 ORTHO05D008122 1.5e-223 779.6 556 73.4
C07p14480 Brassica napus HOM05D006592 ORTHO05D008122 2.2e-222 775.8 556 72.7
THA.LOC104814375 Tarenaya hassleriana HOM05D006592 ORTHO05D008122 6.3e-217 757.7 541 71.0
Sabra03G0072100 Salix brachista HOM05D006592 ORTHO05D008122 1.2e-162 577.4 503 57.9
Prupe.2G060600 Prunus persica HOM05D006592 ORTHO05D008122 1.5e-162 577.0 506 57.7
QL02p100032 Quercus lobata HOM05D006592 ORTHO05D008122 2.6e-162 576.2 503 58.4
Potri.003G105100 Populus trichocarpa HOM05D006592 ORTHO05D008122 5.8e-162 575.1 500 57.0
Dinv37459 Davidia involucrata HOM05D006592 ORTHO05D008122 8.4e-161 571.2 542 55.4
MD07G1026800 Malus domestica HOM05D006592 ORTHO05D008122 7.1e-160 568.2 504 57.3
Manes.17G005500 Manihot esculenta HOM05D006592 ORTHO05D008122 2.3e-158 563.1 502 57.6
Hma1.2p1_1256F.1_g270670 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 3.3e-157 559.3 500 56.6
GSVIVG01036935001 Vitis vinifera HOM05D006592 ORTHO05D008122 3.3e-157 559.3 475 59.4
Atru.chr6.2117 Acer truncatum HOM05D006592 ORTHO05D008122 4.3e-157 558.9 503 56.9
Actinidia29329 Actinidia chinensis HOM05D006592 ORTHO05D008122 7.3e-157 558.1 491 57.6
TAR622G1375 Trochodendron aralioides HOM05D006592 ORTHO05D008122 9.0e-155 551.2 519 54.1
Haze_08005 Corylus avellana HOM05D006592 ORTHO05D008122 1.5e-154 550.4 450 60.7
CiPaw.11G105000 Carya illinoinensis HOM05D006592 ORTHO05D008122 2.6e-154 549.7 443 62.1
TPR.G16815 Trifolium pratense HOM05D006592 ORTHO05D008122 4.4e-154 548.9 501 55.3
Eucgr.E01202 Eucalyptus grandis HOM05D006592 ORTHO05D008122 9.9e-154 547.7 510 56.1
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 3.8e-153 545.8 491 56.4
Glyma.16G075200 Glycine max HOM05D006592 ORTHO05D008122 3.8e-153 545.8 504 55.2
RcHm_v2.0_Chr1g0331171 Rosa chinensis HOM05D006592 ORTHO05D008122 2.4e-152 543.1 508 55.5
Lalb_Chr05g0229391 Lupinus albus HOM05D006592 ORTHO05D008122 3.2e-152 542.7 489 57.7
TWI60G0674 Tripterygium wilfordii HOM05D006592 ORTHO05D008122 3.2e-152 542.7 473 56.2
FvH4_3g41920 Fragaria vesca HOM05D006592 ORTHO05D008122 4.2e-152 542.3 505 54.5
FAN25G1190 Fragaria x ananassa HOM05D006592 ORTHO05D008122 5.4e-152 542.0 506 55.3
arahy.Tifrunner.gnm1.ann1.6CV8VS Arachis hypogaea HOM05D006592 ORTHO05D008122 1.6e-151 540.4 494 55.9
Medtr8g071820 Medicago truncatula HOM05D006592 ORTHO05D008122 1.6e-151 540.4 491 55.8
Nitab4.5_0004477g0030 Nicotiana tabacum HOM05D006592 ORTHO05D008122 2.1e-151 540.0 505 55.2
FAN11G2031 Fragaria x ananassa HOM05D006592 ORTHO05D008122 2.7e-151 539.7 505 54.5
Phvul.003G276900 Phaseolus vulgaris HOM05D006592 ORTHO05D008122 3.5e-151 539.3 499 55.5
arahy.Tifrunner.gnm1.ann1.35U8WI Arachis hypogaea HOM05D006592 ORTHO05D008122 4.6e-151 538.9 494 55.5
ClCG11G016240 Citrullus lanatus HOM05D006592 ORTHO05D008122 6.6e-150 535.0 501 54.5
PSO782G0843 Papaver somniferum HOM05D006592 ORTHO05D008122 4.3e-149 532.3 495 55.4
Duzib084G0624 Durio zibethinus HOM05D006592 ORTHO05D008122 9.6e-149 531.2 494 55.3
PSO063G4459 Papaver somniferum HOM05D006592 ORTHO05D008122 9.6e-149 531.2 479 56.2
Thecc.03G323800 Theobroma cacao HOM05D006592 ORTHO05D008122 1.3e-148 530.8 433 60.5
Rhsim07G0174700 Rhododendron simsii HOM05D006592 ORTHO05D008122 3.6e-148 529.3 459 57.1
MELO3C010544.2 Cucumis melo HOM05D006592 ORTHO05D008122 4.8e-148 528.9 478 55.4
vmacro05080 Vaccinium macrocarpon HOM05D006592 ORTHO05D008122 4.8e-148 528.9 478 55.4
CAN.G561.14 Capsicum annuum HOM05D006592 ORTHO05D008122 6.2e-148 528.5 507 54.2
Aqoxy7G04139 Aquilegia oxysepala HOM05D006592 ORTHO05D008122 1.1e-147 527.7 448 57.1
FAN21G3043 Fragaria x ananassa HOM05D006592 ORTHO05D008122 1.8e-147 526.9 506 54.5
HanXRQChr13g0411871 Helianthus annuus HOM05D006592 ORTHO05D008122 1.8e-147 526.9 503 52.3
PGR042G2051 Punica granatum HOM05D006592 ORTHO05D008122 3.1e-147 526.2 422 60.4
DCAR_028262 Daucus carota HOM05D006592 ORTHO05D008122 4.0e-147 525.8 486 55.8
Nitab4.5_0000063g0390 Nicotiana tabacum HOM05D006592 ORTHO05D008122 1.2e-146 524.2 514 52.7
CsaV3_4G037940 Cucumis sativus L. HOM05D006592 ORTHO05D008122 1.5e-146 523.9 501 52.9
Gorai.004G175600 Gossypium raimondii HOM05D006592 ORTHO05D008122 2.6e-146 523.1 442 58.8
Gohir.D08G168300 Gossypium hirsutum HOM05D006592 ORTHO05D008122 4.5e-146 522.3 442 58.6
Peaxi162Scf00045g01236 Petunia axillaris HOM05D006592 ORTHO05D008122 4.5e-146 522.3 512 53.7
PGSC0003DMG400024141 Solanum tuberosum HOM05D006592 ORTHO05D008122 4.5e-146 522.3 506 54.2
Solyc08g005860.3 Solanum lycopersicum HOM05D006592 ORTHO05D008122 2.9e-145 519.6 503 53.5
SalBow8G1786 Salvia bowleyana HOM05D006592 ORTHO05D008122 3.8e-145 519.2 506 51.8
Lsat_1_v5_gn_5_55220 Lactuca sativa HOM05D006592 ORTHO05D008122 4.2e-144 515.8 508 52.6
SalBow8G4832 Salvia bowleyana HOM05D006592 ORTHO05D008122 5.4e-144 515.4 500 52.2
Sopen08g001820 Solanum pennellii HOM05D006592 ORTHO05D008122 9.3e-144 514.6 503 53.3
Ah.02g117360 Amaranthus hybridus HOM05D006592 ORTHO05D008122 1.6e-143 513.8 480 53.3
ATR0829G075 Amborella trichopoda HOM05D006592 ORTHO05D008122 3.5e-143 512.7 428 58.2
Oeu028120.2 Olea europaea HOM05D006592 ORTHO05D008122 2.3e-142 510.0 508 52.6
ECA240G2178 Erigeron canadensis HOM05D006592 ORTHO05D008122 8.7e-142 508.1 464 56.0
EL10Ac5g11887 Beta vulgaris HOM05D006592 ORTHO05D008122 3.7e-140 502.7 483 52.8
AUR62007438 Chenopodium quinoa HOM05D006592 ORTHO05D008122 1.4e-139 500.7 500 52.0
Cc00_g08640 Coffea canephora HOM05D006592 ORTHO05D008122 1.4e-139 500.7 460 54.1
CDE11G0624 Ceratophyllum demersum HOM05D006592 ORTHO05D008122 3.1e-139 499.6 490 53.9
COL.COLO4_16712 Corchorus olitorius HOM05D006592 ORTHO05D008122 3.1e-139 499.6 424 59.0
CARHR030900 Cardamine hirsuta HOM05D006592 ORTHO05D008122 2.6e-138 496.5 304 80.9
SGA_v2.0_scaffold144G35824 Striga asiatica HOM05D006592 ORTHO05D008122 2.9e-137 493.0 503 50.5
Hund14317 Selenicereus undatus HOM05D006592 ORTHO05D008122 9.3e-136 488.0 514 50.8
Migut.E01392 Erythranthe guttata HOM05D006592 ORTHO05D008122 1.2e-135 487.6 476 51.9
Zm00001eb430350 Zea mays HOM05D006592 ORTHO05D008122 7.9e-135 485.0 434 53.7
VMungo0251G2096 Vigna mungo HOM05D006592 ORTHO05D008122 3.9e-134 482.6 458 55.2
unitig_899.g15474 Utricularia gibba HOM05D006592 ORTHO05D008122 1.4e-123 447.6 403 56.8
Os04g0602200 Oryza sativa ssp. japonica HOM05D006592 ORTHO05D008122 2.2e-116 423.7 388 52.8
Glyma.16G106500 Glycine max HOM05D006592 ORTHO05D008122 1.9e-112 410.6 308 65.9
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 2.3e-110 403.7 298 65.8
Hma1.2p1_1046F.1_g251540 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 5.7e-109 399.1 299 65.2
Gohir.A08G147100 Gossypium hirsutum HOM05D006592 ORTHO05D008122 1.5e-106 391.0 311 61.1
Pp3c1_19230 Physcomitrium patens HOM05D006592 ORTHO05D008122 5.9e-106 389.0 419 46.8
SMO244G0026 Selaginella moellendorffii HOM05D006592 ORTHO05D008122 2.9e-105 386.7 406 47.5
Mapoly0006s0240 Marchantia polymorpha HOM05D006592 ORTHO05D008122 5.0e-105 386.0 462 44.6
AagrBONN_evm.TU.Sc2ySwM_344.4668 Anthoceros agrestis HOM05D006592 ORTHO05D008122 6.7e-102 375.6 406 45.3
Sc01g0005980 Simmondsia chinensis HOM05D006592 ORTHO05D008122 6.3e-100 369.0 277 64.3
Nn1g09214 Nelumbo nucifera HOM05D006592 ORTHO05D008122 2.8e-92 343.6 540 40.0
MBI04_g30774_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 3.1e-83 313.5 516 37.4
AUR62027300 Chenopodium quinoa HOM05D006592 ORTHO05D008122 4.5e-82 309.7 476 37.0
CBR_g19872 Chara braunii HOM05D006592 ORTHO05D008122 2.3e-81 307.4 367 43.6
HPP92_015141 Vanilla planifolia HOM05D006592 ORTHO05D008122 2.3e-81 307.4 223 64.1
Lj8A380T21 Lonicera japonica HOM05D006592 ORTHO05D008122 8.6e-81 305.4 240 62.9
CSS0028407 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 1.9e-80 304.3 273 59.0
Lj4g0008520 Lotus japonicus HOM05D006592 ORTHO05D008122 1.9e-80 304.3 243 62.6
CBR_g37675 Chara braunii HOM05D006592 ORTHO05D008122 1.6e-79 301.2 367 42.8
CSS0043715 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 3.6e-71 273.5 258 57.4
CANSAT11G2102 Cannabis sativa HOM05D006592 ORTHO05D008122 3.0e-57 227.3 251 47.4
Sed0001244 Sechium edule HOM05D006592 ORTHO05D008122 1.9e-56 224.6 507 31.4
CSS0050204 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 6.2e-55 219.5 189 55.0
Cpa.g.sc137.28 Carica papaya HOM05D006592 ORTHO05D008122 1.6e-50 204.9 201 51.2
Cre06.g292100 Chlamydomonas reinhardtii HOM05D006592 ORTHO05D008122 2.7e-50 204.1 344 34.9
Lj4g0015969 Lotus japonicus HOM05D006592 ORTHO05D008122 5.1e-41 173.3 223 42.2
Glyma.16G106700 Glycine max HOM05D006592 ORTHO05D008122 1.1e-40 172.2 188 46.8
Cpa.g.sc137.29 Carica papaya HOM05D006592 ORTHO05D008122 2.4e-38 164.5 106 75.5
AagrBONN_evm.TU.Sc2ySwM_117.3387 Anthoceros agrestis HOM05D006592 ORTHO05D008122 5.3e-38 163.3 310 31.3
Psat4g134920 Pisum sativum HOM05D006592 ORTHO05D008122 1.2e-37 162.2 181 44.8
PRCOL_00001501 Prasinoderma coloniale HOM05D006592 ORTHO05D008122 3.8e-36 157.1 426 30.8
Sc01g0005990 Simmondsia chinensis HOM05D006592 ORTHO05D008122 1.3e-33 148.7 186 42.5
MCO09G637 Micromonas commoda HOM05D006592 ORTHO05D008122 2.3e-33 147.9 415 27.0
MBI14_g31659_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 4.0e-30 137.1 99 69.7
MBI02_g32478_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 3.9e-25 120.6 97 64.9
Zm00001eb071790 Zea mays HOM05D006592 ORTHO05D008122 6.9e-22 109.8 198 39.4
SEGI_06764 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 8.4e-20 102.8 134 42.5
Ciclev10004057m.g Citrus clementina HOM05D006592 ORTHO05D008122 8.7e-17 92.8 81 55.6
Dinv37458 Davidia involucrata HOM05D000040 ORTHO05D000267 9.0e-14 82.8 66 63.6
COL.COLO4_04363 Corchorus olitorius HOM05D003801 ORTHO05D008122 1.5e-13 82.0 79 46.8
C08p16710 Brassica napus HOM05D006592 ORTHO05D008122 1.9e-11 75.1 34 88.2
Hma1.2p1_1046F.1_g251530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.7e-08 63.5 45 55.6


User provided reference genes

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