Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G14410 Aethionema arabicum HOM05D003649 ORTHO05D004498 3.3e-240 834.7 453 100.0
Thhalv10007604m.g Eutrema salsugineum HOM05D003649 ORTHO05D004498 4.0e-193 678.3 455 77.1
CARHR286950 Cardamine hirsuta HOM05D003649 ORTHO05D004498 2.0e-192 676.0 449 76.8
Sp1g27340 Schrenkiella parvula HOM05D003649 ORTHO05D004498 9.9e-192 673.7 454 80.2
AT1G31660 Arabidopsis thaliana HOM05D003649 ORTHO05D004498 9.2e-190 667.2 450 78.7
C07p14470 Brassica napus HOM05D003649 ORTHO05D004498 1.1e-187 660.2 452 79.2
BolC7t41946H Brassica oleracea HOM05D003649 ORTHO05D004498 2.8e-186 655.6 452 78.5
Carub.0001s2998 Capsella rubella HOM05D003649 ORTHO05D004498 1.3e-180 636.7 451 73.2
A07p09400 Brassica napus HOM05D003649 ORTHO05D004498 3.3e-179 632.1 436 78.9
BraA07t28735Z Brassica rapa HOM05D003649 ORTHO05D004498 7.3e-179 630.9 436 78.9
BcaB03g13795 Brassica carinata HOM05D003649 ORTHO05D004498 1.6e-178 629.8 424 75.9
A09p34660 Brassica napus HOM05D003649 ORTHO05D004498 2.1e-165 586.3 409 75.8
BraA09t39000Z Brassica rapa HOM05D003649 ORTHO05D004498 3.3e-163 578.9 409 74.8
Duzib168G1903 Durio zibethinus HOM05D003649 ORTHO05D004498 1.8e-161 573.2 453 66.4
CiPaw.08G013900 Carya illinoinensis HOM05D003649 ORTHO05D004498 8.4e-159 564.3 452 66.6
Gorai.001G124600 Gossypium raimondii HOM05D003649 ORTHO05D004498 8.4e-159 564.3 453 65.3
Gohir.A07G112700 Gossypium hirsutum HOM05D003649 ORTHO05D004498 4.2e-158 562.0 453 64.7
Gohir.D07G116200 Gossypium hirsutum HOM05D003649 ORTHO05D004498 9.3e-158 560.8 453 64.9
THA.LOC104814384 Tarenaya hassleriana HOM05D003649 ORTHO05D004498 3.0e-156 555.8 452 67.9
PGR142G4312 Punica granatum HOM05D003649 ORTHO05D004498 3.9e-156 555.4 450 64.9
CSS0018218 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 1.9e-155 553.1 449 64.8
CSS0028028 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 5.6e-155 551.6 452 64.4
Cfa011266 Carpinus fangiana HOM05D003649 ORTHO05D004498 2.8e-154 549.3 450 66.0
Potri.011G112500 Populus trichocarpa HOM05D003649 ORTHO05D004498 8.2e-154 547.7 450 63.6
Potri.001G394000 Populus trichocarpa HOM05D003649 ORTHO05D004498 2.4e-153 546.2 451 64.1
Actinidia14919 Actinidia chinensis HOM05D003649 ORTHO05D004498 2.6e-152 542.7 449 63.0
BcaB07g32813 Brassica carinata HOM05D003649 ORTHO05D004498 7.6e-152 541.2 397 73.0
Oeu058434.1 Olea europaea HOM05D003649 ORTHO05D004498 7.6e-152 541.2 465 63.0
Prupe.4G148600 Prunus persica HOM05D003649 ORTHO05D004498 7.6e-152 541.2 463 61.6
TWI38G0227 Tripterygium wilfordii HOM05D003649 ORTHO05D004498 2.2e-151 539.7 469 61.4
GSVIVG01011050001 Vitis vinifera HOM05D003649 ORTHO05D004498 2.9e-151 539.3 449 64.1
Hma1.2p1_0505F.1_g168130 Hydrangea macrophylla HOM05D003649 ORTHO05D004498 1.9e-150 536.6 449 64.4
Manes.14G152600 Manihot esculenta HOM05D003649 ORTHO05D004498 1.6e-149 533.5 450 67.3
Peaxi162Scf00111g00723 Petunia axillaris HOM05D003649 ORTHO05D004498 1.6e-149 533.5 451 62.7
Phvul.004G052800 Phaseolus vulgaris HOM05D003649 ORTHO05D004498 4.6e-149 531.9 449 63.0
CANSAT01G2347 Cannabis sativa HOM05D003649 ORTHO05D004498 7.9e-149 531.2 453 67.8
Thecc.09G274600 Theobroma cacao HOM05D003649 ORTHO05D004498 1.0e-148 530.8 453 62.7
BcaC05g27183 Brassica carinata HOM05D003649 ORTHO05D004498 3.0e-148 529.3 429 67.4
Manes.14G150400 Manihot esculenta HOM05D003649 ORTHO05D004498 1.9e-147 526.6 450 66.7
Hund24921 Selenicereus undatus HOM05D003649 ORTHO05D004498 4.3e-147 525.4 449 61.5
Glyma.05G087100 Glycine max HOM05D003649 ORTHO05D004498 5.7e-147 525.0 449 61.7
Ca_25060_v3 Cicer arietinum L. HOM05D003649 ORTHO05D004498 4.8e-146 521.9 449 62.6
Nn7g38381 Nelumbo nucifera HOM05D003649 ORTHO05D004498 4.8e-146 521.9 449 61.9
Lj2g0021753 Lotus japonicus HOM05D003649 ORTHO05D004498 2.4e-145 519.6 450 62.0
COL.COLO4_24336 Corchorus olitorius HOM05D003649 ORTHO05D004498 3.1e-145 519.2 461 60.7
Atru.chr3.3291 Acer truncatum HOM05D003649 ORTHO05D004498 1.2e-144 517.3 421 68.2
Lsat_1_v5_gn_5_148460 Lactuca sativa HOM05D003649 ORTHO05D004498 1.2e-144 517.3 452 60.2
GSVIVG01038352001 Vitis vinifera HOM05D003649 ORTHO05D004498 1.5e-144 516.9 419 64.9
Ah.13g074570 Amaranthus hybridus HOM05D003649 ORTHO05D004498 5.9e-144 515.0 481 56.8
DCAR_002270 Daucus carota HOM05D003649 ORTHO05D004498 5.0e-143 511.9 449 61.7
HanXRQChr13g0424451 Helianthus annuus HOM05D003649 ORTHO05D004498 8.5e-143 511.1 461 57.9
MSTRG.6707 Avicennia marina HOM05D003649 ORTHO05D004498 1.9e-142 510.0 425 64.0
QL02p065039 Quercus lobata HOM05D003649 ORTHO05D004498 1.9e-142 510.0 430 64.2
Sc26g0001160 Simmondsia chinensis HOM05D003649 ORTHO05D004498 2.5e-142 509.6 423 63.8
MD10G1195400 Malus domestica HOM05D003649 ORTHO05D004498 5.5e-142 508.4 434 62.4
SGA_v2.0_scaffold73G24356 Striga asiatica HOM05D003649 ORTHO05D004498 5.5e-142 508.4 431 62.6
PSO675G2950 Papaver somniferum HOM05D003649 ORTHO05D004498 1.2e-141 507.3 452 60.0
EL10Ac3g06484 Beta vulgaris HOM05D003649 ORTHO05D004498 7.9e-141 504.6 423 60.8
Sabra11G0099700 Salix brachista HOM05D003649 ORTHO05D004498 1.4e-140 503.8 433 61.4
PSO541G1065 Papaver somniferum HOM05D003649 ORTHO05D004498 1.8e-140 503.4 452 61.1
vmacro10596 Vaccinium macrocarpon HOM05D003649 ORTHO05D004498 1.8e-140 503.4 458 58.7
SalBow5G3252 Salvia bowleyana HOM05D003649 ORTHO05D004498 6.7e-140 501.5 428 62.4
Aqoxy1G02521 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 3.3e-139 499.2 409 62.6
arahy.Tifrunner.gnm1.ann1.2990BW Arachis hypogaea HOM05D003649 ORTHO05D004498 4.3e-139 498.8 449 57.9
AUR62036018 Chenopodium quinoa HOM05D003649 ORTHO05D004498 2.2e-138 496.5 452 57.7
Nitab4.5_0001924g0070 Nicotiana tabacum HOM05D003649 ORTHO05D004498 2.8e-138 496.1 407 63.9
Rhsim09G0104200 Rhododendron simsii HOM05D003649 ORTHO05D004498 4.1e-137 492.3 431 60.8
Glyma.03G190900 Glycine max HOM05D003649 ORTHO05D004498 3.4e-136 489.2 358 69.3
Medtr5g025980 Medicago truncatula HOM05D003649 ORTHO05D004498 3.4e-136 489.2 454 59.3
MELO3C024126.2 Cucumis melo HOM05D003649 ORTHO05D004498 5.9e-136 488.4 455 57.6
SalBow6G0551 Salvia bowleyana HOM05D003649 ORTHO05D004498 5.9e-136 488.4 423 61.5
SalBow8G0566 Salvia bowleyana HOM05D003649 ORTHO05D004498 1.7e-135 486.9 423 61.2
Actinidia37054 Actinidia chinensis HOM05D003649 ORTHO05D004498 2.2e-135 486.5 403 62.5
Lalb_Chr21g0316901 Lupinus albus HOM05D003649 ORTHO05D004498 3.8e-135 485.7 422 65.4
CsaV3_7G025330 Cucumis sativus L. HOM05D003649 ORTHO05D004498 4.2e-134 482.3 455 56.9
TPR.G34458 Trifolium pratense HOM05D003649 ORTHO05D004498 1.2e-133 480.7 502 54.4
Cpa.g.sc54.5 Carica papaya HOM05D003649 ORTHO05D004498 2.3e-132 476.5 475 58.7
EL10Ac3g06580 Beta vulgaris HOM05D003649 ORTHO05D004498 3.0e-132 476.1 440 56.6
FvH4_3g16580 Fragaria vesca HOM05D003649 ORTHO05D004498 3.3e-131 472.6 477 54.7
TAR627G1042 Trochodendron aralioides HOM05D003649 ORTHO05D004498 3.3e-131 472.6 373 66.0
Eucgr.F01411 Eucalyptus grandis HOM05D003649 ORTHO05D004498 1.7e-130 470.3 421 61.5
ECA236G2713 Erigeron canadensis HOM05D003649 ORTHO05D004498 2.2e-130 469.9 417 58.8
AUR62035508 Chenopodium quinoa HOM05D003649 ORTHO05D004498 2.8e-130 469.5 452 55.8
PGSC0003DMG400027653 Solanum tuberosum HOM05D003649 ORTHO05D004498 3.7e-130 469.2 453 56.5
BolC5t31810H Brassica oleracea HOM05D003649 ORTHO05D004498 1.1e-129 467.6 347 73.2
Ciclev10023274m.g Citrus clementina HOM05D003649 ORTHO05D004498 1.8e-129 466.8 357 67.2
ATR1132G059 Amborella trichopoda HOM05D003649 ORTHO05D004498 4.1e-129 465.7 427 57.1
Migut.M00658 Erythranthe guttata HOM05D003649 ORTHO05D004498 5.3e-129 465.3 424 58.0
Cc05_g10190 Coffea canephora HOM05D003649 ORTHO05D004498 4.5e-128 462.2 328 70.7
arahy.Tifrunner.gnm1.ann1.V43L5Z Arachis hypogaea HOM05D003649 ORTHO05D004498 5.9e-128 461.8 411 58.4
FAN21G1332 Fragaria x ananassa HOM05D003649 ORTHO05D004498 8.5e-127 458.0 475 54.5
MBI17_g43195_MAGBIO Magnolia biondii HOM05D003649 ORTHO05D004498 1.1e-126 457.6 387 62.5
unitig_748.g7599 Utricularia gibba HOM05D003649 ORTHO05D004498 1.1e-126 457.6 418 59.8
FAN11G3158 Fragaria x ananassa HOM05D003649 ORTHO05D004498 3.2e-126 456.1 477 52.4
Haze_02513 Corylus avellana HOM05D003649 ORTHO05D004498 4.2e-126 455.7 495 54.1
Rhsim09G0104400 Rhododendron simsii HOM05D003649 ORTHO05D004498 7.2e-126 454.9 448 56.2
RcHm_v2.0_Chr5g0027651 Rosa chinensis HOM05D003649 ORTHO05D004498 9.4e-126 454.5 454 53.3
MD05G1209000 Malus domestica HOM05D003649 ORTHO05D004498 3.6e-125 452.6 387 61.2
Psat2g144640 Pisum sativum HOM05D003649 ORTHO05D004498 1.4e-124 450.7 403 60.0
Sed0023018 Sechium edule HOM05D003649 ORTHO05D004498 2.3e-124 449.9 461 54.2
Nitab4.5_0001864g0020 Nicotiana tabacum HOM05D003649 ORTHO05D004498 3.9e-124 449.1 337 66.2
Os09g0352400 Oryza sativa ssp. japonica HOM05D003649 ORTHO05D004498 3.9e-124 449.1 444 59.9
arahy.Tifrunner.gnm1.ann1.FP5V95 Arachis hypogaea HOM05D003649 ORTHO05D004498 6.7e-124 448.4 445 53.5
FAN21G3990 Fragaria x ananassa HOM05D003649 ORTHO05D004498 8.8e-124 448.0 443 56.2
ClCG09G009520 Citrullus lanatus HOM05D003649 ORTHO05D004498 7.4e-123 444.9 434 56.2
FAN16G3269 Fragaria x ananassa HOM05D003649 ORTHO05D004498 7.4e-123 444.9 444 55.4
CDE06G0350 Ceratophyllum demersum HOM05D003649 ORTHO05D004498 1.3e-122 444.1 397 59.9
FAN25G2823 Fragaria x ananassa HOM05D003649 ORTHO05D004498 3.7e-122 442.6 444 53.2
arahy.Tifrunner.gnm1.ann1.956DWW Arachis hypogaea HOM05D003649 ORTHO05D004498 5.3e-121 438.7 398 58.3
Migut.M00659 Erythranthe guttata HOM05D003649 ORTHO05D004498 5.3e-121 438.7 459 54.7
Sopen07g029910 Solanum pennellii HOM05D003649 ORTHO05D004498 7.7e-120 434.9 338 65.4
Lj1C808T9 Lonicera japonica HOM05D003649 ORTHO05D004498 4.2e-118 429.1 383 61.1
VMungo1127G0750 Vigna mungo HOM05D003649 ORTHO05D004498 1.2e-117 427.6 372 60.5
PSO339G1025 Papaver somniferum HOM05D003649 ORTHO05D004498 2.1e-117 426.8 445 53.3
PSO339G4670 Papaver somniferum HOM05D003649 ORTHO05D004498 1.4e-116 424.1 445 53.0
Haze_18856 Corylus avellana HOM05D003649 ORTHO05D004498 2.3e-116 423.3 489 52.1
COL.COLO4_22663 Corchorus olitorius HOM05D003649 ORTHO05D004498 4.1e-113 412.5 484 50.0
Zm00001eb065940 Zea mays HOM05D003649 ORTHO05D004498 2.0e-112 410.2 442 52.9
Pp3c14_4070 Physcomitrium patens HOM05D003649 ORTHO05D004498 2.7e-112 409.8 440 50.7
Pp3c10_5710 Physcomitrium patens HOM05D003649 ORTHO05D004498 7.7e-112 408.3 435 50.8
Solyc07g056550.3 Solanum lycopersicum HOM05D003649 ORTHO05D004498 1.1e-110 404.4 309 66.7
Mapoly0048s0058 Marchantia polymorpha HOM05D003649 ORTHO05D004498 7.2e-110 401.7 437 51.3
Aqoxy5G01320 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 4.7e-109 399.1 312 65.1
SMO358G0130 Selaginella moellendorffii HOM05D003649 ORTHO05D004498 2.3e-108 396.7 450 51.1
Ah.13g066610 Amaranthus hybridus HOM05D003649 ORTHO05D004498 5.7e-107 392.1 361 57.1
Thecc.09G275100 Theobroma cacao HOM05D003649 ORTHO05D004498 3.1e-105 386.3 324 60.8
Migut.J00669 Erythranthe guttata HOM05D003649 ORTHO05D004498 7.0e-105 385.2 452 49.3
vmacro10597 Vaccinium macrocarpon HOM05D003649 ORTHO05D004498 1.2e-104 384.4 514 45.1
HPP92_001514 Vanilla planifolia HOM05D003649 ORTHO05D004498 2.7e-104 383.3 407 52.8
AagrBONN_evm.TU.Sc2ySwM_117.301 Anthoceros agrestis HOM05D003649 ORTHO05D004498 5.9e-104 382.1 330 58.5
CBR_g984 Chara braunii HOM05D003649 ORTHO05D004498 1.3e-103 380.9 407 51.6
Gohir.A09G098001 Gossypium hirsutum HOM05D003649 ORTHO05D004498 1.6e-101 374.0 265 69.4
CANSAT80G0167 Cannabis sativa HOM05D003649 ORTHO05D004498 3.6e-101 372.9 278 69.1
Thhalv10028678m.g Eutrema salsugineum HOM05D003649 ORTHO05D004498 1.4e-97 360.9 451 48.8
BcaC06g35364 Brassica carinata HOM05D003649 ORTHO05D004498 4.1e-97 359.4 412 52.7
MCO03G098 Micromonas commoda HOM05D003649 ORTHO05D004498 2.0e-96 357.1 462 47.0
A07p11220 Brassica napus HOM05D003649 ORTHO05D004498 2.7e-96 356.7 412 52.2
A07p08470 Brassica napus HOM05D003649 ORTHO05D004498 2.3e-95 353.6 408 51.7
TPR.G9666 Trifolium pratense HOM05D003649 ORTHO05D004498 8.9e-92 341.7 296 61.1
BraA07t28915Z Brassica rapa HOM05D003649 ORTHO05D004498 7.5e-91 338.6 413 50.8
C07p16930 Brassica napus HOM05D003649 ORTHO05D004498 3.2e-89 333.2 437 49.0
Cre01.g063267 Chlamydomonas reinhardtii HOM05D003649 ORTHO05D004498 5.4e-89 332.4 336 51.8
PRCOL_00003636 Prasinoderma coloniale HOM05D003649 ORTHO05D004498 6.6e-87 325.5 371 48.2
C07p13190 Brassica napus HOM05D003649 ORTHO05D004498 4.7e-85 319.3 376 49.7
BolC7t41812H Brassica oleracea HOM05D003649 ORTHO05D004498 6.2e-85 318.9 376 49.7
BolC7t42199H Brassica oleracea HOM05D003649 ORTHO05D004498 1.4e-81 307.8 355 51.5
BcaC06g35591 Brassica carinata HOM05D003649 ORTHO05D004498 6.0e-80 302.4 367 48.5
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 1.7e-74 284.3 271 59.0
CANSAT54G0397 Cannabis sativa HOM05D003649 ORTHO05D004498 6.4e-74 282.3 209 68.4
RcHm_v2.0_Chr6g0291881 Rosa chinensis HOM05D003649 ORTHO05D004498 4.7e-69 266.2 377 44.0
Atru.chr3.2268 Acer truncatum HOM05D003649 ORTHO05D004498 1.6e-61 241.1 170 73.5
Atru.chr3.2262 Acer truncatum HOM05D003649 ORTHO05D004498 2.8e-61 240.4 169 73.4
Cfa024010 Carpinus fangiana HOM05D003649 ORTHO05D004498 1.9e-54 217.6 322 41.3
C07p16950 Brassica napus HOM05D003649 ORTHO05D027520 8.7e-47 192.2 215 54.0
Pp3c1_22730 Physcomitrium patens HOM05D003649 ORTHO05D004498 5.6e-46 189.5 153 62.1
SEGI_32462 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 3.1e-44 183.7 144 65.3
arahy.Tifrunner.gnm1.ann1.KE86EX Arachis hypogaea HOM05D003649 ORTHO05D004498 1.6e-40 171.4 200 48.0
Sabra16G0258400 Salix brachista HOM05D003649 ORTHO05D004498 3.9e-39 166.8 144 61.8
SEGI_37931 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 7.1e-33 146.0 94 72.3
AL6G50590 Arabidopsis lyrata HOM05D003649 ORTHO05D004498 1.8e-31 141.4 147 51.7
BolC7t42200H Brassica oleracea HOM05D003649 ORTHO05D027520 3.9e-31 140.2 201 44.3
arahy.Tifrunner.gnm1.ann1.S7QI7K Arachis hypogaea HOM05D003649 ORTHO05D004498 3.1e-28 130.6 165 46.1
Actinidia13653 Actinidia chinensis HOM05D003649 ORTHO05D004498 1.5e-27 128.3 131 54.2
C07p16940 Brassica napus HOM05D003649 ORTHO05D027520 4.5e-27 126.7 201 41.8
RhsimUnG0127900 Rhododendron simsii HOM05D003649 ORTHO05D004498 1.6e-24 118.2 84 69.0
arahy.Tifrunner.gnm1.ann1.CT835L Arachis hypogaea HOM05D003649 ORTHO05D004498 2.7e-24 117.5 119 52.1
BolC9t56391H Brassica oleracea HOM05D003649 ORTHO05D004498 2.7e-24 117.5 99 56.6
C09p35520 Brassica napus HOM05D003649 ORTHO05D004498 4.3e-22 110.2 94 57.4
A09p28020 Brassica napus HOM05D003649 ORTHO05D004498 7.4e-22 109.4 90 62.2
BraA07t28632Z Brassica rapa HOM05D003649 ORTHO05D004498 1.3e-21 108.6 101 55.4
DCAR_030783 Daucus carota HOM05D003649 ORTHO05D004498 2.0e-19 101.3 149 45.0
DCAR_030782 Daucus carota HOM05D003649 ORTHO05D004498 4.7e-16 90.1 62 75.8
BcaC05g27926 Brassica carinata HOM05D003649 ORTHO05D004498 1.8e-15 88.2 327 29.7
BolC7t42195H Brassica oleracea HOM05D003649 ORTHO05D040526 2.3e-15 87.8 94 54.3
Thecc.09G274800 Theobroma cacao HOM05D003649 ORTHO05D004498 1.1e-14 85.5 74 60.8
SEGI_11889 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 2.8e-13 80.9 141 37.6
SGA_v2.0_scaffold30G12442 Striga asiatica HOM05D003649 ORTHO05D004498 1.4e-12 78.6 149 38.9
BcaC04g21367 Brassica carinata HOM05D001554 ORTHO05D001481 1.3e-10 72.0 54 59.3
C09p32650 Brassica napus HOM05D003649 ORTHO05D004498 1.3e-10 72.0 54 59.3
C07p16910 Brassica napus HOM05D003649 ORTHO05D041406 2.9e-10 70.9 124 39.5
BolC7t42196H Brassica oleracea HOM05D003649 ORTHO05D041406 2.9e-10 70.9 124 39.5
SGA_v2.0_scaffold24G10283 Striga asiatica HOM05D003649 ORTHO05D031702 5.0e-10 70.1 49 65.3
C07p16900 Brassica napus HOM05D003649 ORTHO05D040526 1.9e-09 68.2 81 50.6
C09p35530 Brassica napus HOM05D003649 ORTHO05D004498 8.8e-07 59.3 190 29.5
Atru.chr3.2263 Acer truncatum HOM05D003649 ORTHO05D004498 1.1e-06 58.9 72 54.2
MBI19_g34544_MAGBIO Magnolia biondii HOM05D000961 ORTHO05D000841 1.1e-06 58.9 39 71.8
Atru.chr3.2269 Acer truncatum HOM05D003649 ORTHO05D004498 2.0e-06 58.2 72 54.2


User provided reference genes

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