Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G1420 Aethionema arabicum HOM05D010600 ORTHO05D007875 3.7e-58 228.0 117 100.0
AT1G64405 Arabidopsis thaliana HOM05D010600 ORTHO05D007875 5.7e-35 151.0 119 68.9
Sp2g00320 Schrenkiella parvula HOM05D010600 ORTHO05D007875 2.2e-34 149.1 118 69.5
Thhalv10023875m.g Eutrema salsugineum HOM05D010600 ORTHO05D007875 3.7e-34 148.3 120 70.0
Carub.0002s0036 Capsella rubella HOM05D010600 ORTHO05D007875 4.9e-34 147.9 121 66.1
AL2G10440 Arabidopsis lyrata HOM05D010600 ORTHO05D007875 1.8e-33 146.0 118 69.5
BcaB07g31463 Brassica carinata HOM05D010600 ORTHO05D007875 7.0e-33 144.1 120 70.0
BcaB07g31500 Brassica carinata HOM05D010600 ORTHO05D007875 2.7e-32 142.1 118 68.6
BcaC04g22619 Brassica carinata HOM05D010600 ORTHO05D007875 2.3e-31 139.0 119 67.2
A09p14360 Brassica napus HOM05D010600 ORTHO05D007875 2.9e-31 138.7 121 66.9
BraA09t37083Z Brassica rapa HOM05D010600 ORTHO05D007875 2.9e-31 138.7 121 66.9
BcaC04g22568 Brassica carinata HOM05D010600 ORTHO05D007875 5.0e-31 137.9 120 69.2
C09p17810 Brassica napus HOM05D010600 ORTHO05D007875 6.6e-31 137.5 119 65.5
BolC9t54679H Brassica oleracea HOM05D010600 ORTHO05D007875 6.6e-31 137.5 119 65.5
C09p17280 Brassica napus HOM05D010600 ORTHO05D007875 3.3e-30 135.2 119 66.4
BolC9t54630H Brassica oleracea HOM05D010600 ORTHO05D007875 3.3e-30 135.2 119 66.4
CARHR046510 Cardamine hirsuta HOM05D010600 ORTHO05D007875 1.6e-29 132.9 118 63.6
A09p14720 Brassica napus HOM05D010600 ORTHO05D007875 9.2e-25 117.1 120 58.3
BraA09t37118Z Brassica rapa HOM05D010600 ORTHO05D007875 9.2e-25 117.1 120 58.3
THA.LOC104817601 Tarenaya hassleriana HOM05D010600 ORTHO05D007875 8.0e-21 104.0 117 53.8
Cpa.g.sc79.34 Carica papaya HOM05D007590 ORTHO05D007875 2.9e-10 68.9 122 37.7
Manes.02G009900 Manihot esculenta HOM05D007590 ORTHO05D007875 1.4e-09 66.6 125 36.8
Rhsim02G0243500 Rhododendron simsii HOM05D007590 ORTHO05D007875 2.4e-09 65.9 121 38.0
AUR62010841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 1.6e-08 63.2 117 38.5
CiPaw.12G082900 Carya illinoinensis HOM05D007590 ORTHO05D007875 2.1e-08 62.8 121 37.2
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 3.5e-08 62.0 116 37.1
QL02p030422 Quercus lobata HOM05D007590 ORTHO05D007875 4.6e-08 61.6 128 36.7
Nn1g01873 Nelumbo nucifera HOM05D007590 ORTHO05D007875 6.0e-08 61.2 119 39.5
Prupe.5G120200 Prunus persica HOM05D007590 ORTHO05D007875 7.8e-08 60.8 130 33.8
TAR374G1746 Trochodendron aralioides HOM05D007590 ORTHO05D007875 7.8e-08 60.8 119 38.7
TAR375G1006 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.3e-07 60.1 115 38.3
Duzib068G0682 Durio zibethinus HOM05D007590 ORTHO05D007875 1.7e-07 59.7 117 36.8
Peaxi162Scf00102g00178 Petunia axillaris HOM05D007590 ORTHO05D007875 1.7e-07 59.7 116 37.1
TAR636G1032 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.7e-07 59.7 114 36.0
AUR62019841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 2.3e-07 59.3 117 40.2
Duzib205G1174 Durio zibethinus HOM05D007590 ORTHO05D007875 2.3e-07 59.3 116 33.6
Hma1.2p1_1746F.1_g300410 Hydrangea macrophylla HOM05D007590 ORTHO05D007875 2.3e-07 59.3 126 35.7
Manes.01G049200 Manihot esculenta HOM05D007590 ORTHO05D007875 2.3e-07 59.3 111 37.8
TPR.G25602 Trifolium pratense HOM05D007590 ORTHO05D007875 2.3e-07 59.3 114 35.1
PGSC0003DMG400012280 Solanum tuberosum HOM05D007590 ORTHO05D007875 3.0e-07 58.9 114 37.7
CiPaw.11G121300 Carya illinoinensis HOM05D007590 ORTHO05D007875 3.9e-07 58.5 121 36.4
TAR629G1835 Trochodendron aralioides HOM05D007590 ORTHO05D007875 3.9e-07 58.5 116 38.8
Aqoxy5G04230 Aquilegia oxysepala HOM05D007590 ORTHO05D007875 5.1e-07 58.2 118 39.0
Solyc08g082370.1 Solanum lycopersicum HOM05D007590 ORTHO05D007875 8.6e-07 57.4 114 38.6
Sopen08g004200 Solanum pennellii HOM05D007590 ORTHO05D007875 1.1e-06 57.0 117 33.3
CDE10G0175 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 1.9e-06 56.2 115 36.5
DCAR_006487 Daucus carota HOM05D007590 ORTHO05D007875 1.9e-06 56.2 119 36.1
Nn3g19015 Nelumbo nucifera HOM05D007590 ORTHO05D007875 1.9e-06 56.2 120 39.2
Sopen08g030630 Solanum pennellii HOM05D007590 ORTHO05D007875 1.9e-06 56.2 114 37.7
Thecc.03G298200 Theobroma cacao HOM05D007590 ORTHO05D007875 2.5e-06 55.8 118 33.1
CSS0045762 Camellia sinensis var. sinensis HOM05D007590 ORTHO05D007875 3.3e-06 55.5 121 38.0
HanXRQChr03g0083501 Helianthus annuus HOM05D007590 ORTHO05D007875 4.3e-06 55.1 116 40.5
CDE10G0927 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 5.6e-06 54.7 115 37.4
Manes.02G010000 Manihot esculenta HOM05D007590 ORTHO05D007875 9.5e-06 53.9 122 34.4


User provided reference genes

Program Settings