Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G13960 Aethionema arabicum HOM05D008998 ORTHO05D013963 2.4e-70 268.9 149 100.0
Aa31LG2G14050 Aethionema arabicum HOM05D008998 ORTHO05D013963 3.7e-47 191.8 155 71.6
Aa31LG2G13980 Aethionema arabicum HOM05D008998 ORTHO05D013963 1.2e-45 186.8 155 69.0
Aa31LG2G14090 Aethionema arabicum HOM05D008998 ORTHO05D013963 2.3e-28 129.4 138 55.8
Thhalv10010009m.g Eutrema salsugineum HOM05D008998 ORTHO05D013963 1.8e-25 119.8 142 47.9
Aa31LG2G14030 Aethionema arabicum HOM05D008998 ORTHO05D013963 3.1e-25 119.0 134 50.0
BcaB03g13773 Brassica carinata HOM05D008998 ORTHO05D013963 2.0e-24 116.3 147 50.3
AL1G46100 Arabidopsis lyrata HOM05D008998 ORTHO05D013963 1.4e-22 110.2 148 46.6
Aa31LG2G14010 Aethionema arabicum HOM05D008998 ORTHO05D013963 1.3e-20 103.6 137 51.1
Aa31LG2G14070 Aethionema arabicum HOM05D008998 ORTHO05D013963 1.3e-20 103.6 137 50.4
C05p39390 Brassica napus HOM05D008998 ORTHO05D013963 4.3e-19 98.6 138 45.7
BolC5t32676H Brassica oleracea HOM05D008998 ORTHO05D013963 4.3e-19 98.6 138 45.7
BcaC05g27935 Brassica carinata HOM05D008998 ORTHO05D013963 5.6e-19 98.2 111 50.5
Carub.0001s3036 Capsella rubella HOM05D008998 ORTHO05D013963 7.1e-14 81.3 140 43.6
AT1G56270 Arabidopsis thaliana HOM05D008998 ORTHO05D012463 1.1e-11 73.9 156 32.7
CARHR031370 Cardamine hirsuta HOM05D008998 ORTHO05D012463 4.8e-10 68.6 140 36.4
Carub.0001s3035 Capsella rubella HOM05D008998 ORTHO05D012463 2.4e-09 66.2 131 33.6
AL1G46080 Arabidopsis lyrata HOM05D008998 ORTHO05D012463 4.0e-09 65.5 129 32.6
Carub.0001s3034 Capsella rubella HOM05D008998 ORTHO05D012463 1.2e-08 63.9 132 34.1
BcaB07g32862 Brassica carinata HOM05D008998 ORTHO05D012463 1.5e-08 63.5 117 40.2
A09p34200 Brassica napus HOM05D008998 ORTHO05D012463 3.4e-08 62.4 126 38.9
BraA09t38968Z Brassica rapa HOM05D008998 ORTHO05D012463 3.4e-08 62.4 126 38.9
BolC5t31857H Brassica oleracea HOM05D008998 ORTHO05D012463 5.8e-08 61.6 126 38.1
Thhalv10009399m.g Eutrema salsugineum HOM05D008998 ORTHO05D012463 1.3e-07 60.5 151 28.5
C05p54730 Brassica napus HOM05D008998 ORTHO05D012463 2.2e-07 59.7 138 31.2
C05p31340 Brassica napus HOM05D008998 ORTHO05D012463 3.8e-07 58.9 126 37.3
CARHR214140 Cardamine hirsuta HOM05D026207 ORTHO05D033956 4.9e-07 58.5 126 36.5
AL1G48740 Arabidopsis lyrata HOM05D026207 ORTHO05D000005 6.4e-07 58.2 149 35.6
CARHR031390 Cardamine hirsuta HOM05D008998 ORTHO05D012463 6.4e-07 58.2 144 29.9
BolC5t34144H Brassica oleracea HOM05D008998 ORTHO05D012463 8.4e-07 57.8 138 30.4
BcaC05g27229 Brassica carinata HOM05D008998 ORTHO05D012463 4.2e-06 55.5 143 28.0
BraA09t38962Z Brassica rapa HOM05D008998 ORTHO05D012463 5.5e-06 55.1 143 26.6
Sp1g27700 Schrenkiella parvula HOM05D008998 ORTHO05D012463 5.5e-06 55.1 138 26.8
A09p34130 Brassica napus HOM05D008998 ORTHO05D012463 9.3e-06 54.3 129 28.7


User provided reference genes

Program Settings