Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G13810 Aethionema arabicum HOM05D004519 ORTHO05D006283 4.4e-267 924.1 478 100.0
Thhalv10007540m.g Eutrema salsugineum HOM05D004519 ORTHO05D006283 3.7e-221 771.5 483 82.2
Sp1g27880 Schrenkiella parvula HOM05D004519 ORTHO05D006283 3.1e-220 768.5 482 82.0
AL1G46330 Arabidopsis lyrata HOM05D004519 ORTHO05D006283 1.8e-215 752.7 478 81.4
Carub.0001s3053 Capsella rubella HOM05D004519 ORTHO05D006283 5.1e-215 751.1 477 81.3
AT1G32200 Arabidopsis thaliana HOM05D004519 ORTHO05D006283 6.7e-215 750.7 478 81.2
CARHR031570 Cardamine hirsuta HOM05D004519 ORTHO05D006283 4.8e-213 744.6 479 80.8
BcaC05g27905 Brassica carinata HOM05D004519 ORTHO05D006283 9.0e-212 740.3 475 79.8
BcaB03g13753 Brassica carinata HOM05D004519 ORTHO05D006283 3.8e-210 734.9 477 78.8
A05p25130 Brassica napus HOM05D004519 ORTHO05D006283 1.2e-208 729.9 473 78.4
BraA05t21393Z Brassica rapa HOM05D004519 ORTHO05D006283 1.2e-208 729.9 473 78.4
BcaC07g37628 Brassica carinata HOM05D004519 ORTHO05D006283 1.8e-207 726.1 474 78.3
BolC8t47999H Brassica oleracea HOM05D004519 ORTHO05D006283 5.1e-207 724.5 474 78.1
A08p09320 Brassica napus HOM05D004519 ORTHO05D006283 9.7e-206 720.3 474 77.8
BraA08t32930Z Brassica rapa HOM05D004519 ORTHO05D006283 9.7e-206 720.3 474 77.8
BcaB07g32892 Brassica carinata HOM05D004519 ORTHO05D006283 1.4e-204 716.5 475 77.5
BcaB04g17996 Brassica carinata HOM05D004519 ORTHO05D006283 1.8e-204 716.1 474 77.8
A09p34000 Brassica napus HOM05D004519 ORTHO05D006283 4.2e-201 704.9 478 76.6
C05p31600 Brassica napus HOM05D004519 ORTHO05D006283 6.1e-200 701.0 405 85.2
BolC5t31883H Brassica oleracea HOM05D004519 ORTHO05D006283 6.1e-200 701.0 405 85.2
BcaC05g27251 Brassica carinata HOM05D004519 ORTHO05D006283 5.7e-198 694.5 405 84.4
C05p39140 Brassica napus HOM05D004519 ORTHO05D006283 2.9e-194 682.2 438 80.1
THA.LOC104814413 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 2.2e-189 666.0 476 72.1
THA.LOC104812759 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 2.4e-188 662.5 446 75.6
BraA09t38946Z Brassica rapa HOM05D004519 ORTHO05D006283 7.2e-185 651.0 478 72.4
PSO063G4347 Papaver somniferum HOM05D004519 ORTHO05D006283 8.9e-167 590.9 446 65.2
PSO782G3212 Papaver somniferum HOM05D004519 ORTHO05D006283 7.5e-166 587.8 446 65.0
Ciclev10001047m.g Citrus clementina HOM05D004519 ORTHO05D006283 9.8e-166 587.4 482 61.2
Manes.17G018849 Manihot esculenta HOM05D004519 ORTHO05D006283 3.7e-165 585.5 443 64.6
PGR042G1943 Punica granatum HOM05D004519 ORTHO05D006283 1.1e-164 583.9 453 62.9
FvH4_5g23060 Fragaria vesca HOM05D004519 ORTHO05D006283 1.8e-164 583.2 406 69.0
FAN18G3814 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.8e-164 583.2 406 69.0
GSVIVG01013060001 Vitis vinifera HOM05D004519 ORTHO05D006283 5.4e-164 581.6 476 62.6
RcHm_v2.0_Chr7g0211781 Rosa chinensis HOM05D004519 ORTHO05D006283 9.2e-164 580.9 423 67.1
FAN04G1490 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.6e-163 580.1 421 67.0
FAN18G1908 Fragaria x ananassa HOM05D004519 ORTHO05D006283 6.6e-162 574.7 422 66.6
Potri.001G136600 Populus trichocarpa HOM05D004519 ORTHO05D006283 1.1e-161 573.9 413 67.3
Lalb_Chr09g0325481 Lupinus albus HOM05D004519 ORTHO05D006283 1.5e-161 573.5 432 66.0
CiPaw.11G098500 Carya illinoinensis HOM05D004519 ORTHO05D006283 4.3e-161 572.0 409 67.5
Cfa012505 Carpinus fangiana HOM05D004519 ORTHO05D006283 9.5e-161 570.9 410 66.6
Gorai.007G033500 Gossypium raimondii HOM05D004519 ORTHO05D006283 1.2e-160 570.5 410 69.3
MD06G1026700 Malus domestica HOM05D004519 ORTHO05D006283 1.6e-160 570.1 457 61.9
Gorai.004G182200 Gossypium raimondii HOM05D004519 ORTHO05D006283 2.8e-160 569.3 465 61.9
Dinv25262 Davidia involucrata HOM05D004519 ORTHO05D006283 6.2e-160 568.2 405 67.7
Oeu027094.2 Olea europaea HOM05D004519 ORTHO05D006283 8.0e-160 567.8 371 72.0
CsaV3_3G048840 Cucumis sativus L. HOM05D004519 ORTHO05D006283 1.0e-159 567.4 430 65.8
FAN13G3061 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.0e-159 567.4 406 66.7
CSS0024637 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 1.4e-159 567.0 452 63.1
Eucgr.E00228 Eucalyptus grandis HOM05D004519 ORTHO05D006283 1.8e-159 566.6 406 67.5
MD16G1279400 Malus domestica HOM05D004519 ORTHO05D006283 1.8e-159 566.6 422 64.9
Sc01g0007150 Simmondsia chinensis HOM05D004519 ORTHO05D006283 2.3e-159 566.2 402 68.4
Aqoxy3G02176 Aquilegia oxysepala HOM05D004519 ORTHO05D006283 1.2e-158 563.9 410 65.9
CiPaw.12G068400 Carya illinoinensis HOM05D004519 ORTHO05D006283 1.2e-158 563.9 404 68.8
Nn1g00218 Nelumbo nucifera HOM05D004519 ORTHO05D006283 4.4e-158 562.0 411 65.7
Dinv29004 Davidia involucrata HOM05D004519 ORTHO05D006283 5.8e-158 561.6 442 62.4
Gohir.A11G028600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 5.8e-158 561.6 405 68.4
Nn3g19385 Nelumbo nucifera HOM05D004519 ORTHO05D006283 7.5e-158 561.2 418 65.8
MELO3C003440.2 Cucumis melo HOM05D004519 ORTHO05D006283 8.3e-157 557.8 403 68.2
Gohir.D11G030600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 8.3e-157 557.8 405 68.1
Hma1.2p1_1569F.1_g291200 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 1.4e-156 557.0 456 62.9
TAR629G2035 Trochodendron aralioides HOM05D004519 ORTHO05D006283 2.4e-156 556.2 474 59.9
Gohir.A03G000032 Gossypium hirsutum HOM05D004519 ORTHO05D006283 3.2e-156 555.8 450 63.6
Medtr5g029230 Medicago truncatula HOM05D004519 ORTHO05D006283 1.2e-155 553.9 366 70.8
Lalb_Chr16g0381061 Lupinus albus HOM05D004519 ORTHO05D006283 1.6e-155 553.5 366 70.5
Sed0022223 Sechium edule HOM05D004519 ORTHO05D006283 4.6e-155 552.0 413 65.1
HanXRQChr03g0083251 Helianthus annuus HOM05D004519 ORTHO05D006283 6.0e-155 551.6 376 70.5
Gorai.003G185500 Gossypium raimondii HOM05D004519 ORTHO05D006283 7.8e-155 551.2 450 63.1
Lj4g0001331 Lotus japonicus HOM05D004519 ORTHO05D006283 1.3e-154 550.4 418 64.6
Nitab4.5_0000529g0120 Nicotiana tabacum HOM05D004519 ORTHO05D006283 1.3e-154 550.4 476 59.0
TPR.G19434 Trifolium pratense HOM05D004519 ORTHO05D006283 3.0e-154 549.3 383 67.6
MBI04_g32203_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 5.0e-154 548.5 467 60.2
Psat2g139000 Pisum sativum HOM05D004519 ORTHO05D006283 5.6e-153 545.0 366 69.4
VMungo1215G0394 Vigna mungo HOM05D004519 ORTHO05D006283 7.3e-153 544.7 366 70.2
Duzib205G0301 Durio zibethinus HOM05D004519 ORTHO05D006283 9.5e-153 544.3 461 60.5
Glyma.01G014200 Glycine max HOM05D004519 ORTHO05D006283 1.2e-152 543.9 366 69.7
Glyma.09G207900 Glycine max HOM05D004519 ORTHO05D006283 4.7e-152 542.0 366 69.1
Sabra01G0105700 Salix brachista HOM05D004519 ORTHO05D006283 1.1e-151 540.8 460 61.3
Lsat_1_v5_gn_6_80100 Lactuca sativa HOM05D004519 ORTHO05D006283 1.4e-151 540.4 415 64.8
Ca_25177_v3 Cicer arietinum L. HOM05D004519 ORTHO05D006283 1.8e-151 540.0 355 71.5
CANSAT01G0127 Cannabis sativa HOM05D004519 ORTHO05D006283 3.1e-151 539.3 356 71.3
CAN.G726.25 Capsicum annuum HOM05D004519 ORTHO05D006283 6.8e-151 538.1 463 59.0
HanXRQChr13g0414231 Helianthus annuus HOM05D004519 ORTHO05D006283 1.5e-150 537.0 386 68.4
SGA_v2.0_scaffold198G41070 Striga asiatica HOM05D004519 ORTHO05D006283 2.0e-150 536.6 394 65.5
Cc08_g03490 Coffea canephora HOM05D004519 ORTHO05D006283 2.6e-150 536.2 371 69.5
ECA240G3299 Erigeron canadensis HOM05D004519 ORTHO05D006283 2.6e-150 536.2 364 69.8
Solyc08g076470.4 Solanum lycopersicum HOM05D004519 ORTHO05D006283 3.4e-150 535.8 441 59.6
Phvul.002G136600 Phaseolus vulgaris HOM05D004519 ORTHO05D006283 4.4e-150 535.4 400 65.5
Migut.E00743 Erythranthe guttata HOM05D004519 ORTHO05D006283 7.5e-150 534.6 432 60.4
Sopen08g025050 Solanum pennellii HOM05D004519 ORTHO05D006283 7.5e-150 534.6 441 59.6
MSTRG.24848 Avicennia marina HOM05D004519 ORTHO05D006283 3.7e-149 532.3 375 66.4
Os10g0577900 Oryza sativa ssp. japonica HOM05D004519 ORTHO05D006283 4.9e-149 531.9 362 68.0
ClCG09G011630 Citrullus lanatus HOM05D004519 ORTHO05D006283 9.2e-148 527.7 423 63.1
Zm00001eb224960 Zea mays HOM05D004519 ORTHO05D006283 1.6e-147 526.9 357 67.5
ATR0829G164 Amborella trichopoda HOM05D004519 ORTHO05D006283 7.8e-147 524.6 417 62.6
Zm00001eb025080 Zea mays HOM05D004519 ORTHO05D006283 1.3e-146 523.9 362 66.6
Rhsim11G0021900 Rhododendron simsii HOM05D004519 ORTHO05D006283 4.7e-144 515.4 584 49.5
Prupe.5G027200 Prunus persica HOM05D004519 ORTHO05D006283 8.9e-143 511.1 423 60.0
CSS0001538 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 1.5e-142 510.4 333 71.8
AUR62007353 Chenopodium quinoa HOM05D004519 ORTHO05D006283 9.2e-140 501.1 425 58.8
SEGI_02196 Sequoiadendron giganteum HOM05D004519 ORTHO05D006283 2.1e-139 500.0 422 60.2
AUR62018641 Chenopodium quinoa HOM05D004519 ORTHO05D006283 3.5e-139 499.2 352 66.5
vmacro00276 Vaccinium macrocarpon HOM05D004519 ORTHO05D006283 3.5e-139 499.2 329 71.1
CDE12G0245 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 7.8e-139 498.0 361 67.0
QL12p001672 Quercus lobata HOM05D004519 ORTHO05D006283 7.8e-139 498.0 528 50.0
DCAR_008221 Daucus carota HOM05D004519 ORTHO05D006283 3.0e-138 496.1 373 64.6
arahy.Tifrunner.gnm1.ann1.BI8WMI Arachis hypogaea HOM05D004519 ORTHO05D006283 5.1e-138 495.4 344 68.9
arahy.Tifrunner.gnm1.ann1.D9NVDI Arachis hypogaea HOM05D004519 ORTHO05D006283 5.1e-138 495.4 344 68.9
Gohir.D03G176300 Gossypium hirsutum HOM05D004519 ORTHO05D006283 1.5e-137 493.8 333 70.9
Thecc.03G310400 Theobroma cacao HOM05D004519 ORTHO05D006283 2.8e-136 489.6 419 60.6
Duzib068G1409 Durio zibethinus HOM05D004519 ORTHO05D006283 6.2e-136 488.4 419 60.1
unitig_32.g10899 Utricularia gibba HOM05D004519 ORTHO05D006283 1.8e-135 486.9 420 58.1
Lj2A231G41 Lonicera japonica HOM05D004519 ORTHO05D006283 1.2e-134 484.2 481 54.7
Gohir.D08G174500 Gossypium hirsutum HOM05D004519 ORTHO05D006283 6.0e-131 471.9 397 61.0
Gohir.A08G153600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 3.0e-130 469.5 397 61.2
CDE04G2515 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 3.3e-129 466.1 364 62.6
FAN08G3243 Fragaria x ananassa HOM05D004519 ORTHO05D006283 4.3e-129 465.7 439 57.2
Mapoly0045s0098 Marchantia polymorpha HOM05D004519 ORTHO05D006283 2.1e-128 463.4 416 52.2
Nitab4.5_0012493g0010 Nicotiana tabacum HOM05D004519 ORTHO05D006283 1.2e-126 457.6 297 70.7
Haze_08164 Corylus avellana HOM05D004519 ORTHO05D006283 4.2e-124 449.1 419 55.8
SMO244G0022 Selaginella moellendorffii HOM05D004519 ORTHO05D006283 2.1e-123 446.8 353 59.2
Peaxi162Scf00170g00818 Petunia axillaris HOM05D004519 ORTHO05D006283 3.0e-122 443.0 425 53.9
EL10Ac5g12013 Beta vulgaris HOM05D004519 ORTHO05D006283 7.4e-121 438.3 413 54.2
HPP92_020895 Vanilla planifolia HOM05D004519 ORTHO05D006283 1.3e-117 427.6 293 68.3
HanXRQChr06g0172791 Helianthus annuus HOM05D004519 ORTHO05D006283 4.2e-116 422.5 370 57.8
Pp3c7_2970 Physcomitrium patens HOM05D004519 ORTHO05D006283 4.2e-116 422.5 402 49.0
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 3.0e-114 416.4 369 55.8
EL10Ac5g12011 Beta vulgaris HOM05D004519 ORTHO05D006283 4.0e-111 406.0 386 53.1
DCAR_004271 Daucus carota HOM05D004519 ORTHO05D006283 7.9e-107 391.7 248 71.4
CBR_g4494 Chara braunii HOM05D004519 ORTHO05D006283 1.1e-105 387.9 371 51.5
Actinidia01317 Actinidia chinensis HOM05D004519 ORTHO05D006283 1.1e-103 381.3 327 62.1
Cpa.g.sc208.3 Carica papaya HOM05D004519 ORTHO05D006283 1.3e-101 374.4 217 78.8
Eucgr.E01634 Eucalyptus grandis HOM05D004519 ORTHO05D006283 7.2e-100 368.6 255 69.0
Haze_08160 Corylus avellana HOM05D004519 ORTHO05D006283 6.7e-98 362.1 255 68.2
Atru.chr6.1525 Acer truncatum HOM05D004519 ORTHO05D006283 4.1e-87 326.2 206 74.3
Cre02.g143000 Chlamydomonas reinhardtii HOM05D004519 ORTHO05D006283 1.1e-76 291.6 381 40.2
PRCOL_00006772 Prasinoderma coloniale HOM05D004519 ORTHO05D006283 1.5e-65 254.6 342 41.2
MCO03G317 Micromonas commoda HOM05D004519 ORTHO05D006283 3.1e-63 246.9 329 40.4
Actinidia29340 Actinidia chinensis HOM05D004519 ORTHO05D006283 1.7e-61 241.1 177 66.7
Hma1.2p1_3246F.1_g334370 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 2.0e-46 191.0 176 55.1
Cpa.g.sc208.5 Carica papaya HOM05D004519 ORTHO05D006283 4.0e-42 176.8 223 51.6
MBI15_g25773_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 8.9e-34 149.1 98 68.4
Eucgr.A01818 Eucalyptus grandis HOM05D004519 ORTHO05D006283 4.1e-31 140.2 95 67.4
HanXRQChr16g0500211 Helianthus annuus HOM05D004519 ORTHO05D006283 2.1e-22 111.3 77 70.1
Haze_20066 Corylus avellana HOM05D004519 ORTHO05D007437 1.6e-19 101.7 95 53.7
Actinidia01316 Actinidia chinensis HOM05D004519 ORTHO05D006283 8.1e-19 99.4 68 67.6
arahy.Tifrunner.gnm1.ann1.LG4SFI Arachis hypogaea HOM05D000755 ORTHO05D017477 3.4e-17 94.0 108 46.3
PGSC0003DMG401014796 Solanum tuberosum HOM05D004519 ORTHO05D006283 1.7e-16 91.7 92 46.7
COL.COLO4_16939 Corchorus olitorius HOM05D004519 ORTHO05D006283 5.4e-15 86.7 84 60.7
Gohir.D08G117301 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.0e-13 82.4 55 65.5
Gohir.D11G228750 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.0e-13 82.4 55 65.5
Gohir.D11G251850 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.0e-13 82.4 55 65.5
Gohir.D13G135501 Gossypium hirsutum HOM05D004519 ORTHO05D017048 3.0e-13 80.9 55 63.6
Gorai.008G116000 Gossypium raimondii HOM05D004519 ORTHO05D017048 1.1e-12 79.0 54 64.8
RcHm_v2.0_Chr5g0062811 Rosa chinensis HOM05D004519 ORTHO05D017048 1.1e-12 79.0 54 61.1
Actinidia29341 Actinidia chinensis HOM05D004519 ORTHO05D052920 3.5e-06 57.4 32 71.9
arahy.Tifrunner.gnm1.ann1.18EICQ Arachis hypogaea HOM05D000755 ORTHO05D017477 6.0e-06 56.6 53 54.7


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