Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 2.8e-59 231.9 130 100.0
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 2.4e-50 202.2 128 87.5
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 2.9e-48 195.3 126 84.9
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 1.5e-47 193.0 122 86.9
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 3.3e-47 191.8 123 86.2
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 1.2e-46 189.9 128 82.8
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 8.0e-46 187.2 121 85.1
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 4.4e-44 181.4 129 81.4
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 4.4e-44 181.4 129 81.4
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 4.4e-44 181.4 129 81.4
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 4.4e-44 181.4 129 81.4
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 1.3e-43 179.9 129 80.6
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 2.9e-43 178.7 121 83.5
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 2.9e-43 178.7 127 76.4
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 9.2e-42 173.7 121 77.7
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 4.6e-33 144.8 123 67.5
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 4.9e-27 124.8 134 56.0
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 1.4e-26 123.2 133 57.1
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 1.9e-26 122.9 126 64.3
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 3.2e-26 122.1 117 61.5
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 3.2e-26 122.1 106 64.2
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 7.1e-26 120.9 124 61.3
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 1.6e-25 119.8 105 64.8
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 2.1e-25 119.4 115 62.6
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 2.7e-25 119.0 113 61.1
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 4.6e-25 118.2 103 65.0
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 4.6e-25 118.2 103 65.0
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 4.6e-25 118.2 129 56.6
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 4.6e-25 118.2 109 64.2
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 6.0e-25 117.9 109 65.1
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 7.8e-25 117.5 126 58.7
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 1.0e-24 117.1 126 57.9
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 1.0e-24 117.1 107 62.6
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 1.0e-24 117.1 117 59.0
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 1.0e-24 117.1 120 59.2
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 1.3e-24 116.7 123 58.5
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 1.3e-24 116.7 120 59.2
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 1.3e-24 116.7 120 59.2
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 1.3e-24 116.7 121 60.3
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 1.7e-24 116.3 110 61.8
BcaC05g27873 Brassica carinata HOM05D006869 ORTHO05D008641 2.3e-24 115.9 119 66.4
C05p38760 Brassica napus HOM05D006869 ORTHO05D008641 2.3e-24 115.9 119 66.4
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 2.3e-24 115.9 117 58.1
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 3.0e-24 115.5 126 57.1
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 5.1e-24 114.8 97 69.1
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 5.1e-24 114.8 119 59.7
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 6.6e-24 114.4 99 66.7
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 6.6e-24 114.4 122 58.2
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 6.6e-24 114.4 99 63.6
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 6.6e-24 114.4 112 63.4
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 6.6e-24 114.4 100 66.0
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 1.1e-23 113.6 118 58.5
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 1.5e-23 113.2 113 57.5
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 1.5e-23 113.2 126 57.1
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 1.9e-23 112.8 113 57.5
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 1.9e-23 112.8 119 58.0
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 1.9e-23 112.8 119 58.0
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 2.5e-23 112.5 116 55.2
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 3.3e-23 112.1 107 61.7
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 4.3e-23 111.7 124 56.5
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 4.3e-23 111.7 116 58.6
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 4.3e-23 111.7 95 66.3
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 5.6e-23 111.3 104 62.5
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 1.2e-22 110.2 113 56.6
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.2e-22 110.2 124 56.5
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 1.2e-22 110.2 127 52.0
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 1.6e-22 109.8 109 57.8
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 1.6e-22 109.8 114 55.3
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 1.6e-22 109.8 95 64.2
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 1.6e-22 109.8 127 52.0
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 2.1e-22 109.4 125 55.2
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 2.1e-22 109.4 103 63.1
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 6.2e-22 107.8 125 56.0
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 6.2e-22 107.8 99 64.6
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 1.4e-21 106.7 126 52.4
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.8e-21 106.3 125 55.2
BolC5t32616H Brassica oleracea HOM05D006869 ORTHO05D008641 2.4e-21 105.9 84 78.6
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 8.9e-21 104.0 128 52.3
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 1.2e-20 103.6 116 55.2
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 1.5e-20 103.2 104 54.8
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 2.6e-20 102.4 135 51.1
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 4.4e-20 101.7 96 61.5
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 5.8e-20 101.3 152 48.0
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 9.9e-20 100.5 164 44.5
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 1.9e-18 96.3 110 51.8
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 5.4e-18 94.7 163 44.2
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 1.2e-17 93.6 101 57.4
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 2.1e-17 92.8 146 44.5
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 3.3e-15 85.5 115 47.8
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 5.6e-15 84.7 85 56.5
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 7.3e-15 84.3 90 55.6
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 2.8e-14 82.4 74 62.2
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 3.6e-14 82.0 89 57.3
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 6.2e-14 81.3 97 50.5
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 2.4e-13 79.3 74 59.5
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 5.3e-13 78.2 111 45.9
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 1.2e-12 77.0 70 61.4
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 1.5e-12 76.6 75 60.0
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 2.0e-12 76.3 69 60.9
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 1.3e-11 73.6 77 55.8
Psat1g009440 Pisum sativum HOM05D006869 ORTHO05D008641 1.7e-11 73.2 71 62.0
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 1.1e-10 70.5 77 53.2
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 1.9e-10 69.7 70 57.1
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 1.2e-09 67.0 71 49.3
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 3.5e-09 65.5 83 48.2
Mapoly0009s0146 Marchantia polymorpha HOM05D006869 ORTHO05D008641 6.0e-09 64.7 93 43.0
Zm00001eb390630 Zea mays HOM05D006869 ORTHO05D008641 5.1e-08 61.6 49 69.4
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 1.1e-07 60.5 94 39.4
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 4.3e-07 58.5 43 72.1
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 2.1e-06 56.2 80 46.2
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 4.8e-06 55.1 44 65.9


User provided reference genes

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