Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G13310 Aethionema arabicum HOM05D000793 ORTHO05D058676 2.4e-90 335.5 172 100.0
BcaNung02225 Brassica carinata HOM05D000793 ORTHO05D000783 6.0e-33 144.8 169 52.1
Aa31LG11G13420 Aethionema arabicum HOM05D000793 ORTHO05D000783 1.0e-32 144.1 186 49.5
BcaC03g18480 Brassica carinata HOM05D000793 ORTHO05D000783 5.7e-31 138.3 197 46.7
AL6G27060 Arabidopsis lyrata HOM05D000793 ORTHO05D000783 6.3e-30 134.8 195 46.7
CARHR197120 Cardamine hirsuta HOM05D000793 ORTHO05D000783 2.4e-29 132.9 198 45.5
A02p03420 Brassica napus HOM05D000793 ORTHO05D000783 3.1e-29 132.5 197 46.7
BcaC03g18473 Brassica carinata HOM05D000793 ORTHO05D000783 4.1e-29 132.1 195 46.7
BolC2t06742H Brassica oleracea HOM05D000793 ORTHO05D000783 5.3e-29 131.7 192 46.4
C02p08180 Brassica napus HOM05D000793 ORTHO05D000783 6.9e-29 131.3 192 45.8
BraA02t05313Z Brassica rapa HOM05D000793 ORTHO05D000783 6.9e-29 131.3 197 46.2
AT5G16180 Arabidopsis thaliana HOM05D000793 ORTHO05D000783 2.0e-28 129.8 195 45.6
Carub.0006s1437 Capsella rubella HOM05D000793 ORTHO05D000783 3.4e-28 129.0 198 43.9
Sp6g27965 Schrenkiella parvula HOM05D000793 ORTHO05D000783 5.9e-28 128.3 191 46.6
Thhalv10012836m.g Eutrema salsugineum HOM05D000793 ORTHO05D000783 1.7e-27 126.7 197 43.7
Cpa.g.sc170.50 Carica papaya HOM05D000793 ORTHO05D000783 1.9e-18 96.7 186 42.5
Ciclev10013368m.g Citrus clementina HOM05D000793 ORTHO05D000783 3.0e-16 89.4 208 34.6
GSVIVG01031001001 Vitis vinifera HOM05D000793 ORTHO05D000783 3.0e-16 89.4 190 36.3
Potri.017G116700 Populus trichocarpa HOM05D000793 ORTHO05D000783 1.1e-15 87.4 187 39.0
Sabra17G0096600 Salix brachista HOM05D000793 ORTHO05D000783 2.6e-15 86.3 193 37.3
Dinv33958 Davidia involucrata HOM05D000793 ORTHO05D000783 3.3e-15 85.9 192 35.9
Dinv34808 Davidia involucrata HOM05D000793 ORTHO05D000783 3.3e-15 85.9 190 35.3
Gohir.D11G170500 Gossypium hirsutum HOM05D000793 ORTHO05D000783 7.4e-15 84.7 192 34.9
Gorai.007G182400 Gossypium raimondii HOM05D000793 ORTHO05D000783 7.4e-15 84.7 192 34.9
Aqoxy3G00226 Aquilegia oxysepala HOM05D000793 ORTHO05D000783 2.2e-14 83.2 189 33.9
Lsat_1_v5_gn_2_79400 Lactuca sativa HOM05D000793 ORTHO05D000783 2.2e-14 83.2 186 35.5
QL02p050861 Quercus lobata HOM05D000793 ORTHO05D000783 2.2e-14 83.2 189 35.4
MBI16_g42518_MAGBIO Magnolia biondii HOM05D000793 ORTHO05D000783 2.8e-14 82.8 182 37.9
Atru.chr1.1645 Acer truncatum HOM05D000793 ORTHO05D000783 3.7e-14 82.4 190 35.8
Cfa007907 Carpinus fangiana HOM05D000793 ORTHO05D000783 3.7e-14 82.4 190 35.3
Lj4A190G75 Lonicera japonica HOM05D000793 ORTHO05D000783 3.7e-14 82.4 183 33.3
Gohir.A11G164200 Gossypium hirsutum HOM05D000793 ORTHO05D000783 4.8e-14 82.0 190 34.2
Hma1.2p1_0075F.1_g039280 Hydrangea macrophylla HOM05D000793 ORTHO05D000783 4.8e-14 82.0 190 37.9
Glyma.18G295000 Glycine max HOM05D000793 ORTHO05D000783 6.3e-14 81.6 195 33.8
Oeu050381.1 Olea europaea HOM05D000793 ORTHO05D000783 8.2e-14 81.3 190 32.1
VMungo1383G3712 Vigna mungo HOM05D000793 ORTHO05D000783 1.1e-13 80.9 195 32.8
DCAR_025905 Daucus carota HOM05D000793 ORTHO05D000783 2.4e-13 79.7 188 36.2
ECA238G0576 Erigeron canadensis HOM05D000793 ORTHO05D000783 3.1e-13 79.3 191 35.1
Eucgr.F02508 Eucalyptus grandis HOM05D000793 ORTHO05D000783 3.1e-13 79.3 185 32.4
Peaxi162Scf00394g00815 Petunia axillaris HOM05D000793 ORTHO05D000783 3.1e-13 79.3 188 35.1
THA.LOC104820940 Tarenaya hassleriana HOM05D000793 ORTHO05D000783 4.1e-13 79.0 194 32.0
TWI74G1195 Tripterygium wilfordii HOM05D000793 ORTHO05D000783 4.1e-13 79.0 191 31.9
Duzib052G0508 Durio zibethinus HOM05D000793 ORTHO05D000783 6.9e-13 78.2 188 33.5
CANSAT78G1170 Cannabis sativa HOM05D000793 ORTHO05D000783 9.1e-13 77.8 191 33.0
Medtr2g100660 Medicago truncatula HOM05D000793 ORTHO05D000783 2.0e-12 76.6 197 32.5
Nitab4.5_0007990g0070 Nicotiana tabacum HOM05D000793 ORTHO05D000783 3.4e-12 75.9 185 31.9
Cc07_g08670 Coffea canephora HOM05D000793 ORTHO05D000783 4.5e-12 75.5 188 33.5
Prupe.3G145000 Prunus persica HOM05D000793 ORTHO05D000783 4.5e-12 75.5 188 35.6
Psat7g263480 Pisum sativum HOM05D000793 ORTHO05D000783 5.9e-12 75.1 197 32.5
CAN.G625.36 Capsicum annuum HOM05D000793 ORTHO05D000783 1.3e-11 73.9 185 32.4
Phvul.008G007700 Phaseolus vulgaris HOM05D000793 ORTHO05D000783 1.3e-11 73.9 190 31.6
Thecc.04G131100 Theobroma cacao HOM05D000793 ORTHO05D000783 1.3e-11 73.9 190 33.2
Lalb_Chr04g0257551 Lupinus albus HOM05D000793 ORTHO05D000783 1.7e-11 73.6 202 29.2
CSS0012068 Camellia sinensis var. sinensis HOM05D000793 ORTHO05D000783 2.2e-11 73.2 194 32.5
CSS0040604 Camellia sinensis var. sinensis HOM05D000793 ORTHO05D000783 2.2e-11 73.2 194 32.5
Actinidia15895 Actinidia chinensis HOM05D000793 ORTHO05D000783 2.9e-11 72.8 190 29.5
PGR004G0321 Punica granatum HOM05D000793 ORTHO05D000783 2.9e-11 72.8 191 34.0
QL12p016370 Quercus lobata HOM05D000793 ORTHO05D000783 3.8e-11 72.4 220 28.6
Rhsim10G0069300 Rhododendron simsii HOM05D000793 ORTHO05D000783 3.8e-11 72.4 200 31.0
Actinidia36334 Actinidia chinensis HOM05D000793 ORTHO05D000783 5.0e-11 72.0 204 28.9
PGSC0003DMG401026400 Solanum tuberosum HOM05D000793 ORTHO05D000783 5.0e-11 72.0 185 31.4
Lj4A188T43 Lonicera japonica HOM05D000793 ORTHO05D000783 6.5e-11 71.6 193 30.1
MD09G1254900 Malus domestica HOM05D000793 ORTHO05D000783 6.5e-11 71.6 190 33.7
PSO478G3590 Papaver somniferum HOM05D000793 ORTHO05D000783 6.5e-11 71.6 192 31.2
HanXRQChr14g0440471 Helianthus annuus HOM05D000793 ORTHO05D000783 8.5e-11 71.2 191 31.4
CiPaw.04G043500 Carya illinoinensis HOM05D000793 ORTHO05D000783 1.1e-10 70.9 190 32.6
Ca_20956_v3 Cicer arietinum L. HOM05D000793 ORTHO05D000783 1.1e-10 70.9 190 32.1
Sc11g0008430 Simmondsia chinensis HOM05D000793 ORTHO05D000783 1.1e-10 70.9 189 33.3
Nitab4.5_0000912g0050 Nicotiana tabacum HOM05D000793 ORTHO05D000783 1.4e-10 70.5 185 31.9
SalBow3G1049 Salvia bowleyana HOM05D000793 ORTHO05D000783 1.4e-10 70.5 192 31.2
TPR.G38736 Trifolium pratense HOM05D000793 ORTHO05D000783 1.4e-10 70.5 197 31.0
TAR629G2628 Trochodendron aralioides HOM05D000793 ORTHO05D000783 1.4e-10 70.5 185 33.0
AUR62009017 Chenopodium quinoa HOM05D000793 ORTHO05D000783 4.2e-10 68.9 199 31.2
Sed0009672 Sechium edule HOM05D000793 ORTHO05D000783 7.2e-10 68.2 203 29.1
Solyc02g086200.3 Solanum lycopersicum HOM05D000793 ORTHO05D000783 7.2e-10 68.2 185 30.3
Sopen02g030880 Solanum pennellii HOM05D000793 ORTHO05D000783 1.2e-09 67.4 185 30.3
ClCG11G007830 Citrullus lanatus HOM05D000793 ORTHO05D000783 2.1e-09 66.6 197 30.5
ATR1125G057 Amborella trichopoda HOM05D000793 ORTHO05D000783 3.6e-09 65.9 188 30.3
arahy.Tifrunner.gnm1.ann1.IR2EG3 Arachis hypogaea HOM05D000793 ORTHO05D000783 4.7e-09 65.5 176 29.5
CsaV3_2G033770 Cucumis sativus L. HOM05D000793 ORTHO05D000783 6.1e-09 65.1 189 29.1
Hund13706 Selenicereus undatus HOM05D000793 ORTHO05D000783 6.1e-09 65.1 190 31.6
Migut.H00230 Erythranthe guttata HOM05D000793 ORTHO05D000783 8.0e-09 64.7 190 31.1
arahy.Tifrunner.gnm1.ann1.87GB58 Arachis hypogaea HOM05D000793 ORTHO05D000783 1.4e-08 63.9 176 27.8
arahy.Tifrunner.gnm1.ann1.LVM5YM Arachis hypogaea HOM05D000793 ORTHO05D000783 1.4e-08 63.9 176 27.8
BcaC03g18477 Brassica carinata HOM05D000793 ORTHO05D000783 1.8e-08 63.5 129 40.3
CANSAT78G2081 Cannabis sativa HOM05D000793 ORTHO05D031553 1.8e-08 63.5 85 45.9
Cc04_g07070 Coffea canephora HOM05D000793 ORTHO05D000783 2.3e-08 63.2 188 30.9
Os08g0360100 Oryza sativa ssp. japonica HOM05D000793 ORTHO05D000783 3.9e-08 62.4 189 31.2
arahy.Tifrunner.gnm1.ann1.USTW7R Arachis hypogaea HOM05D000793 ORTHO05D000783 5.2e-08 62.0 178 29.2
EL10Ac2g04549 Beta vulgaris HOM05D000793 ORTHO05D000783 6.7e-08 61.6 203 30.0
Lj1g0019544 Lotus japonicus HOM05D000793 ORTHO05D000783 6.7e-08 61.6 190 31.1
Nn4g24848 Nelumbo nucifera HOM05D000793 ORTHO05D000783 2.6e-07 59.7 95 45.3
vmacro05535 Vaccinium macrocarpon HOM05D000793 ORTHO05D000783 2.6e-07 59.7 238 28.6
Aa31LG3G6620 Aethionema arabicum HOM05D000793 ORTHO05D058744 4.4e-07 58.9 37 75.7
Haze_14173 Corylus avellana HOM05D000793 ORTHO05D000783 5.7e-07 58.5 91 41.8
COL.COLO4_09355 Corchorus olitorius HOM05D000793 ORTHO05D000783 1.3e-06 57.4 184 28.8
Atru.chr1.1644 Acer truncatum HOM05D000793 ORTHO05D000783 2.2e-06 56.6 86 45.3


User provided reference genes

Program Settings